RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 RPLP1P05386 114 aaKnown RBP5.89□□□□□ -1.47
SRP54-209ENST00000555746 MAPK1P28482 360 aa5.89□□□□□ -1.47
SRP54-209ENST00000555746 GRNP28799 593 aaKnown RBP5.89□□□□□ -1.47
SRP54-209ENST00000555746 LAMC2Q13753 1193 aa5.89□□□□□ -1.47
SRP54-209ENST00000555746 RGL4Q8IZJ4 473 aa5.89□□□□□ -1.47
SRP54-209ENST00000555746 GJD3Q8N144 294 aa5.89□□□□□ -1.47
SRP54-209ENST00000555746 PIK3R5Q8WYR1 880 aa5.89□□□□□ -1.47
SRP54-209ENST00000555746 EDEM1Q92611 657 aa5.89□□□□□ -1.47
SRP54-209ENST00000555746 CEP63Q96MT8 703 aa5.89□□□□□ -1.47
SRP54-209ENST00000555746 BRD7Q9NPI1 651 aa5.89□□□□□ -1.47
SRP54-209ENST00000555746 POLIQ9UNA4 740 aa5.89□□□□□ -1.47
SRP54-209ENST00000555746 EGFRP00533 1210 aa5.88□□□□□ -1.47
SRP54-209ENST00000555746 EPB42P16452 691 aa5.88□□□□□ -1.47
SRP54-209ENST00000555746 DNM1Q05193 864 aaKnown RBP5.88□□□□□ -1.47
SRP54-209ENST00000555746 TNP2Q05952 138 aa5.88□□□□□ -1.47
SRP54-209ENST00000555746 PDE3BQ13370 1112 aa5.88□□□□□ -1.47
SRP54-209ENST00000555746 AAMPQ13685 434 aa5.88□□□□□ -1.47
SRP54-209ENST00000555746 ZSCAN29Q8IWY8 852 aaPredicted RBP5.88□□□□□ -1.47
SRP54-209ENST00000555746 GPR152Q8TDT2 470 aa5.88□□□□□ -1.47
SRP54-209ENST00000555746 NUDT16Q96DE0 195 aaKnown RBP5.88□□□□□ -1.47
SRP54-209ENST00000555746 NXF1Q9UBU9 619 aaKnown RBP5.88□□□□□ -1.47
SRP54-209ENST00000555746 RTCBQ9Y3I0 505 aaKnown RBP5.88□□□□□ -1.47
SRP54-209ENST00000555746 KCNMB2Q9Y691 235 aa5.88□□□□□ -1.47
SRP54-209ENST00000555746 BNIP3LO60238 219 aa5.87□□□□□ -1.47
SRP54-209ENST00000555746 PCSK2P16519 638 aa5.87□□□□□ -1.47
SRP54-209ENST00000555746 EHHADHQ08426 723 aa5.87□□□□□ -1.47
SRP54-209ENST00000555746 COL19A1Q14993 1142 aa5.87□□□□□ -1.47
SRP54-209ENST00000555746 XKR5Q6UX68 686 aa5.87□□□□□ -1.47
SRP54-209ENST00000555746 TMC7Q7Z402 723 aa5.87□□□□□ -1.47
SRP54-209ENST00000555746 ALKBH8Q96BT7 664 aaKnown RBP5.87□□□□□ -1.47
SRP54-209ENST00000555746 DMRTB1Q96MA1 342 aa5.87□□□□□ -1.47
SRP54-209ENST00000555746 CFHR5Q9BXR6 569 aa5.87□□□□□ -1.47
SRP54-209ENST00000555746 HCN2Q9UL51 889 aa5.87□□□□□ -1.47
SRP54-209ENST00000555746 ATXN7L1Q9ULK2 861 aaPredicted RBP5.87□□□□□ -1.47
SRP54-209ENST00000555746 ANKRD33BA6NCL7 494 aa5.86□□□□□ -1.47
SRP54-209ENST00000555746 MAPTP10636 758 aaKnown RBP5.86□□□□□ -1.47
SRP54-209ENST00000555746 FAM182BQ5T319 152 aa5.86□□□□□ -1.47
SRP54-209ENST00000555746 SV2AQ7L0J3 742 aa5.86□□□□□ -1.47
SRP54-209ENST00000555746 NPAS4Q8IUM7 802 aa5.86□□□□□ -1.47
SRP54-209ENST00000555746 GTPBP3Q969Y2 492 aaKnown RBP5.86□□□□□ -1.47
SRP54-209ENST00000555746 GGNBP2Q9H3C7 697 aa5.86□□□□□ -1.47
SRP54-209ENST00000555746 PHF24Q9UPV7 400 aa5.86□□□□□ -1.47
SRP54-209ENST00000555746 KCNH4Q9UQ05 1017 aa5.86□□□□□ -1.47
SRP54-209ENST00000555746 FNDC3AQ9Y2H6 1198 aaKnown RBP5.86□□□□□ -1.47
SRP54-209ENST00000555746 CUX2O14529 1486 aa5.85□□□□□ -1.47
SRP54-209ENST00000555746 DCDC2BA2VCK2 349 aa5.85□□□□□ -1.47
SRP54-209ENST00000555746 KHNYNO15037 678 aaKnown RBP5.85□□□□□ -1.47
SRP54-209ENST00000555746 GPR182O15218 404 aa5.85□□□□□ -1.47
SRP54-209ENST00000555746 TREHO43280 583 aa5.85□□□□□ -1.47
SRP54-209ENST00000555746 VSIG8P0DPA2 414 aa5.85□□□□□ -1.47
SRP54-209ENST00000555746 SFSWAPQ12872 951 aaKnown RBP5.85□□□□□ -1.47
SRP54-209ENST00000555746 DSC3Q14574 896 aa5.85□□□□□ -1.47
SRP54-209ENST00000555746 TRIP4Q15650 581 aaPredicted RBP5.85□□□□□ -1.47
SRP54-209ENST00000555746 PDE12Q6L8Q7 609 aaKnown RBP5.85□□□□□ -1.47
SRP54-209ENST00000555746 CMTR1Q8N1G2 835 aaKnown RBP5.85□□□□□ -1.47
SRP54-209ENST00000555746 VWA5B2Q8N398 1253 aa5.85□□□□□ -1.47
SRP54-209ENST00000555746 ABHD17AQ96GS6 310 aa5.85□□□□□ -1.47
SRP54-209ENST00000555746 EFCC1Q9HA90 598 aa5.85□□□□□ -1.47
SRP54-209ENST00000555746 MARK1Q9P0L2 795 aa5.85□□□□□ -1.47
SRP54-209ENST00000555746 AMOTL2Q9Y2J4 779 aa5.85□□□□□ -1.47
SRP54-209ENST00000555746 USP20Q9Y2K6 914 aa5.85□□□□□ -1.47
SRP54-209ENST00000555746 CDC14CA4D256 554 aa5.84□□□□□ -1.47
SRP54-209ENST00000555746 H3BM21 787 aa5.84□□□□□ -1.47
SRP54-209ENST00000555746 FMR1Q06787 632 aaKnown RBP eCLIP5.84□□□□□ -1.472e-7■□□□□ 8.6
SRP54-209ENST00000555746 ZNF787Q6DD87 383 aa5.84□□□□□ -1.47
SRP54-209ENST00000555746 FOXR1Q6PIV2 292 aa5.84□□□□□ -1.47
SRP54-209ENST00000555746 TRERF1Q96PN7 1200 aa5.84□□□□□ -1.47
SRP54-209ENST00000555746 GSX2Q9BZM3 304 aa5.84□□□□□ -1.47
SRP54-209ENST00000555746 STRN4Q9NRL3 753 aa5.84□□□□□ -1.47
SRP54-209ENST00000555746 CECR2Q9BXF3 1484 aa5.83□□□□□ -1.48
SRP54-209ENST00000555746 UBAP1LF5GYI3 381 aa5.83□□□□□ -1.48
SRP54-209ENST00000555746 XYLBO75191 536 aa5.83□□□□□ -1.48
SRP54-209ENST00000555746 FGFR3P22607 806 aa5.83□□□□□ -1.48
SRP54-209ENST00000555746 CCINQ13939 588 aa5.83□□□□□ -1.48
SRP54-209ENST00000555746 NEFLP07196 543 aa5.82□□□□□ -1.48
SRP54-209ENST00000555746 PLCB3Q01970 1234 aa5.82□□□□□ -1.48
SRP54-209ENST00000555746 C8orf34Q49A92 452 aa5.82□□□□□ -1.48
SRP54-209ENST00000555746 FBXO33Q7Z6M2 555 aa5.82□□□□□ -1.48
SRP54-209ENST00000555746 TTC16Q8NEE8 873 aa5.82□□□□□ -1.48
SRP54-209ENST00000555746 TMC1Q8TDI8 760 aa5.82□□□□□ -1.48
SRP54-209ENST00000555746 RBM47A0AV96 593 aaKnown RBP5.81□□□□□ -1.48
SRP54-209ENST00000555746 A6NHS1 94 aa5.81□□□□□ -1.48
SRP54-209ENST00000555746 GPR25O00155 361 aa5.81□□□□□ -1.48
SRP54-209ENST00000555746 TERTO14746 1132 aaKnown RBP5.81□□□□□ -1.48
SRP54-209ENST00000555746 CD33P20138 364 aa5.81□□□□□ -1.48
SRP54-209ENST00000555746 SPEM2Q0P670 501 aa5.81□□□□□ -1.48
SRP54-209ENST00000555746 ZNF438Q7Z4V0 828 aa5.81□□□□□ -1.48
SRP54-209ENST00000555746 NLRP13Q86W25 1043 aa5.81□□□□□ -1.48
SRP54-209ENST00000555746 GPR161Q8N6U8 529 aaKnown RBP5.81□□□□□ -1.48
SRP54-209ENST00000555746 SLC30A3Q99726 388 aa5.81□□□□□ -1.48
SRP54-209ENST00000555746 NIF3L1Q9GZT8 377 aa5.81□□□□□ -1.48
SRP54-209ENST00000555746 ELP3Q9H9T3 547 aa5.81□□□□□ -1.48
SRP54-209ENST00000555746 TNFRSF21O75509 655 aa5.8□□□□□ -1.48
SRP54-209ENST00000555746 P4HBP07237 508 aaKnown RBP5.8□□□□□ -1.48
SRP54-209ENST00000555746 VEGFBP49765 207 aa5.8□□□□□ -1.48
SRP54-209ENST00000555746 CTBSQ01459 385 aa5.8□□□□□ -1.48
SRP54-209ENST00000555746 GAS6Q14393 721 aa5.8□□□□□ -1.48
SRP54-209ENST00000555746 GRIN2CQ14957 1233 aa5.8□□□□□ -1.48
SRP54-209ENST00000555746 SNX29Q8TEQ0 813 aa5.8□□□□□ -1.48
SRP54-209ENST00000555746 DNAJC25Q9H1X3 360 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms