RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 SIK1P57059 783 aa9.89□□□□□ -0.83
PCNX4-210ENST00000555740 MVPQ14764 893 aaKnown RBP9.89□□□□□ -0.83
PCNX4-210ENST00000555740 INTS3Q68E01 1043 aaKnown RBP9.89□□□□□ -0.83
PCNX4-210ENST00000555740 G2E3Q7L622 706 aa9.89□□□□□ -0.83
PCNX4-210ENST00000555740 USP16Q9Y5T5 823 aa9.89□□□□□ -0.83
PCNX4-210ENST00000555740 PROSER3Q2NL68 480 aa9.89□□□□□ -0.83
PCNX4-210ENST00000555740 DNAJC10Q8IXB1 793 aa9.89□□□□□ -0.83
PCNX4-210ENST00000555740 UPF1Q92900 1129 aaKnown RBP eCLIP9.89□□□□□ -0.83
PCNX4-210ENST00000555740 CCDC102AQ96A19 550 aa9.89□□□□□ -0.83
PCNX4-210ENST00000555740 SYTL4Q96C24 671 aaPredicted RBP9.89□□□□□ -0.83
PCNX4-210ENST00000555740 BMP2KQ9NSY1 1161 aaPredicted RBP9.89□□□□□ -0.83
PCNX4-210ENST00000555740 NBPF26B4DH59 902 aa9.88□□□□□ -0.83
PCNX4-210ENST00000555740 STARD3NLO95772 234 aa9.88□□□□□ -0.83
PCNX4-210ENST00000555740 NBPF14Q5TI25 921 aa9.88□□□□□ -0.83
PCNX4-210ENST00000555740 NBPF10Q6P3W6 841 aaKnown RBP9.88□□□□□ -0.83
PCNX4-210ENST00000555740 MICALL2Q8IY33 904 aa9.88□□□□□ -0.83
PCNX4-210ENST00000555740 NBPF15Q8N660 670 aa9.88□□□□□ -0.83
PCNX4-210ENST00000555740 FRAT1Q92837 279 aaPredicted RBP9.88□□□□□ -0.83
PCNX4-210ENST00000555740 CRBNQ96SW2 442 aa9.88□□□□□ -0.83
PCNX4-210ENST00000555740 ZMYND15Q9H091 742 aa9.88□□□□□ -0.83
PCNX4-210ENST00000555740 PODXL2Q9NZ53 605 aa9.88□□□□□ -0.83
PCNX4-210ENST00000555740 TNNQ9UQP3 1299 aa9.88□□□□□ -0.83
PCNX4-210ENST00000555740 PTCD1O75127 700 aaKnown RBP9.88□□□□□ -0.83
PCNX4-210ENST00000555740 EIF2S2P20042 333 aaKnown RBP9.88□□□□□ -0.83
PCNX4-210ENST00000555740 ITPK1Q13572 414 aa9.88□□□□□ -0.83
PCNX4-210ENST00000555740 TCERG1O14776 1098 aaKnown RBP9.87□□□□□ -0.83
PCNX4-210ENST00000555740 HMGB2P26583 209 aaKnown RBP9.87□□□□□ -0.83
PCNX4-210ENST00000555740 PTF1AQ7RTS3 328 aa9.87□□□□□ -0.83
PCNX4-210ENST00000555740 PARP9Q8IXQ6 854 aa9.87□□□□□ -0.83
PCNX4-210ENST00000555740 FTSJ3Q8IY81 847 aaKnown RBP9.87□□□□□ -0.83
PCNX4-210ENST00000555740 PANK1Q8TE04 598 aa9.87□□□□□ -0.83
PCNX4-210ENST00000555740 GALR2O43603 387 aaPredicted RBP9.87□□□□□ -0.83
PCNX4-210ENST00000555740 CCT4P50991 539 aaKnown RBP9.87□□□□□ -0.83
PCNX4-210ENST00000555740 RC3H1Q5TC82 1133 aaKnown RBP9.87□□□□□ -0.83
PCNX4-210ENST00000555740 TMEM57Q8N5G2 664 aa9.87□□□□□ -0.83
PCNX4-210ENST00000555740 C2orf72A6NCS6 295 aa9.86□□□□□ -0.83
PCNX4-210ENST00000555740 SLC27A3Q5K4L6 730 aa9.86□□□□□ -0.83
PCNX4-210ENST00000555740 DDX12PQ92771 950 aa9.86□□□□□ -0.83
PCNX4-210ENST00000555740 PHAXQ9H814 394 aaKnown RBP9.86□□□□□ -0.83
PCNX4-210ENST00000555740 DDX19BQ9UMR2 479 aa9.86□□□□□ -0.83
PCNX4-210ENST00000555740 DDX58O95786 925 aaKnown RBP9.86□□□□□ -0.83
PCNX4-210ENST00000555740 IL6STP40189 918 aaPredicted RBP9.86□□□□□ -0.83
PCNX4-210ENST00000555740 INTS5Q6P9B9 1019 aaKnown RBP9.86□□□□□ -0.83
PCNX4-210ENST00000555740 KSR2Q6VAB6 950 aa9.86□□□□□ -0.83
PCNX4-210ENST00000555740 EXOC6Q8TAG9 804 aa9.86□□□□□ -0.83
PCNX4-210ENST00000555740 NECTIN2Q92692 538 aa9.86□□□□□ -0.83
PCNX4-210ENST00000555740 CHMP4BQ9H444 224 aaKnown RBP9.86□□□□□ -0.83
PCNX4-210ENST00000555740 CCDC87Q9NVE4 849 aa9.86□□□□□ -0.83
PCNX4-210ENST00000555740 COL15A1P39059 1388 aa9.86□□□□□ -0.83
PCNX4-210ENST00000555740 CASZ1Q86V15 1759 aa9.85□□□□□ -0.83
PCNX4-210ENST00000555740 PLSCR1O15162 318 aa9.85□□□□□ -0.83
PCNX4-210ENST00000555740 FKBP5Q13451 457 aaPredicted RBP9.85□□□□□ -0.83
PCNX4-210ENST00000555740 FAM182BQ5T319 152 aa9.85□□□□□ -0.83
PCNX4-210ENST00000555740 PDCD7Q8N8D1 485 aaKnown RBP9.85□□□□□ -0.83
PCNX4-210ENST00000555740 LINC00116Q8NCU8 138 aa9.85□□□□□ -0.83
PCNX4-210ENST00000555740 ATP6V1AP38606 617 aa9.85□□□□□ -0.83
PCNX4-210ENST00000555740 PLPP6Q8IY26 295 aa9.85□□□□□ -0.83
PCNX4-210ENST00000555740 XAGE3Q8WTP9 111 aa9.85□□□□□ -0.83
PCNX4-210ENST00000555740 DNAAF4Q8WXU2 420 aa9.85□□□□□ -0.83
PCNX4-210ENST00000555740 ALDH1L1O75891 902 aa9.84□□□□□ -0.83
PCNX4-210ENST00000555740 A1BGP04217 495 aa9.84□□□□□ -0.83
PCNX4-210ENST00000555740 CRKLP46109 303 aaKnown RBP9.84□□□□□ -0.83
PCNX4-210ENST00000555740 IRX6P78412 446 aaPredicted RBP9.84□□□□□ -0.83
PCNX4-210ENST00000555740 PLBD2Q8NHP8 589 aa9.84□□□□□ -0.83
PCNX4-210ENST00000555740 PPP4R2Q9NY27 417 aa9.84□□□□□ -0.83
PCNX4-210ENST00000555740 ZBTB1Q9Y2K1 713 aa9.84□□□□□ -0.83
PCNX4-210ENST00000555740 COG6Q9Y2V7 657 aa9.84□□□□□ -0.83
PCNX4-210ENST00000555740 ANXA1P04083 346 aa9.84□□□□□ -0.83
PCNX4-210ENST00000555740 EIF5P55010 431 aaKnown RBP9.84□□□□□ -0.83
PCNX4-210ENST00000555740 BEND3Q5T5X7 828 aa9.84□□□□□ -0.83
PCNX4-210ENST00000555740 UTYO14607 1347 aa9.83□□□□□ -0.84
PCNX4-210ENST00000555740 MYH3P11055 1940 aa9.83□□□□□ -0.84
PCNX4-210ENST00000555740 FOXK1P85037 733 aa9.83□□□□□ -0.84
PCNX4-210ENST00000555740 CLUAP1Q96AJ1 413 aa9.83□□□□□ -0.84
PCNX4-210ENST00000555740 ZBTB40Q9NUA8 1239 aa9.83□□□□□ -0.84
PCNX4-210ENST00000555740 CCNL1Q9UK58 526 aaPredicted RBP9.83□□□□□ -0.84
PCNX4-210ENST00000555740 DDX60Q8IY21 1712 aaKnown RBP9.83□□□□□ -0.84
PCNX4-210ENST00000555740 TRIM37O94972 964 aa9.83□□□□□ -0.84
PCNX4-210ENST00000555740 COPS6Q7L5N1 327 aa9.83□□□□□ -0.84
PCNX4-210ENST00000555740 ITPRIPQ8IWB1 547 aa9.83□□□□□ -0.84
PCNX4-210ENST00000555740 METTL22Q9BUU2 404 aaPredicted RBP9.83□□□□□ -0.84
PCNX4-210ENST00000555740 MAP3K15Q6ZN16 1313 aa9.82□□□□□ -0.84
PCNX4-210ENST00000555740 PI4KAP2A4QPH2 592 aa9.82□□□□□ -0.84
PCNX4-210ENST00000555740 ERVV-1B6SEH8 477 aa9.82□□□□□ -0.84
PCNX4-210ENST00000555740 ZBTB7BO15156 539 aaPredicted RBP9.82□□□□□ -0.84
PCNX4-210ENST00000555740 PI4KAP1Q8N8J0 262 aa9.82□□□□□ -0.84
PCNX4-210ENST00000555740 LINS1Q8NG48 757 aa9.82□□□□□ -0.84
PCNX4-210ENST00000555740 MAP3K2Q9Y2U5 619 aa9.82□□□□□ -0.84
PCNX4-210ENST00000555740 A0A087WZG4 1122 aa9.82□□□□□ -0.84
PCNX4-210ENST00000555740 F6X3S4 739 aa9.82□□□□□ -0.84
PCNX4-210ENST00000555740 MYL6BP14649 208 aa9.82□□□□□ -0.84
PCNX4-210ENST00000555740 REPIN1Q9BWE0 567 aaKnown RBP9.82□□□□□ -0.84
PCNX4-210ENST00000555740 NRXN2Q9P2S2 1712 aa9.82□□□□□ -0.84
PCNX4-210ENST00000555740 LRP5O75197 1615 aa9.81□□□□□ -0.84
PCNX4-210ENST00000555740 OSBPP22059 807 aa9.81□□□□□ -0.84
PCNX4-210ENST00000555740 TMEM92Q6UXU6 159 aa9.81□□□□□ -0.84
PCNX4-210ENST00000555740 ANKRD13DQ6ZTN6 518 aa9.81□□□□□ -0.84
PCNX4-210ENST00000555740 SRCIN1Q9C0H9 1055 aa9.81□□□□□ -0.84
PCNX4-210ENST00000555740 TRIM28Q13263 835 aaKnown RBP9.81□□□□□ -0.84
PCNX4-210ENST00000555740 KIF6Q6ZMV9 814 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms