RNA–Protein interactions for RNA: ENST00000553835.5

PSMC1-203, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 3

Gene PSMC1, Length 390 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-203ENST00000553835 COL15A1P39059 1388 aa12.65□□□□□ -0.38
PSMC1-203ENST00000553835 KLRG2A4D1S0 409 aaPredicted RBP12.64□□□□□ -0.39
PSMC1-203ENST00000553835 HIRAP54198 1017 aaPredicted RBP12.64□□□□□ -0.39
PSMC1-203ENST00000553835 LRCH3Q96II8 777 aa12.64□□□□□ -0.39
PSMC1-203ENST00000553835 CACNA1AO00555 2505 aa12.63□□□□□ -0.39
PSMC1-203ENST00000553835 PTCD1O75127 700 aaKnown RBP12.63□□□□□ -0.39
PSMC1-203ENST00000553835 TBC1D8O95759 1140 aa12.63□□□□□ -0.39
PSMC1-203ENST00000553835 OLFM4Q6UX06 510 aa12.63□□□□□ -0.39
PSMC1-203ENST00000553835 ANKRD13DQ6ZTN6 518 aa12.63□□□□□ -0.39
PSMC1-203ENST00000553835 SLC12A5Q9H2X9 1139 aa12.63□□□□□ -0.39
PSMC1-203ENST00000553835 GBA2Q9HCG7 927 aaPredicted RBP12.63□□□□□ -0.39
PSMC1-203ENST00000553835 PUS7Q96PZ0 661 aaKnown RBP12.62□□□□□ -0.39
PSMC1-203ENST00000553835 FLT4P35916 1363 aa12.61□□□□□ -0.39
PSMC1-203ENST00000553835 CYP19A1P11511 503 aaPredicted RBP12.61□□□□□ -0.39
PSMC1-203ENST00000553835 CDCA8Q53HL2 280 aa12.61□□□□□ -0.39
PSMC1-203ENST00000553835 TBC1D9BQ66K14 1250 aa12.61□□□□□ -0.39
PSMC1-203ENST00000553835 CCDC24Q8N4L8 307 aa12.61□□□□□ -0.39
PSMC1-203ENST00000553835 FAM122AQ96E09 287 aa12.61□□□□□ -0.39
PSMC1-203ENST00000553835 SNX27Q96L92 541 aa12.61□□□□□ -0.39
PSMC1-203ENST00000553835 FKTNO75072 461 aa12.6□□□□□ -0.39
PSMC1-203ENST00000553835 TERF2IPQ9NYB0 399 aa12.6□□□□□ -0.39
PSMC1-203ENST00000553835 RAPGEFL1Q9UHV5 662 aa12.6□□□□□ -0.39
PSMC1-203ENST00000553835 NPR1P16066 1061 aa12.59□□□□□ -0.39
PSMC1-203ENST00000553835 TM4SF4P48230 202 aa12.59□□□□□ -0.39
PSMC1-203ENST00000553835 DLK2Q6UY11 383 aa12.59□□□□□ -0.39
PSMC1-203ENST00000553835 USP48Q86UV5 1035 aa12.59□□□□□ -0.39
PSMC1-203ENST00000553835 RASAL3Q86YV0 1011 aa12.59□□□□□ -0.39
PSMC1-203ENST00000553835 DNAJC10Q8IXB1 793 aa12.59□□□□□ -0.39
PSMC1-203ENST00000553835 C2orf69Q8N8R5 385 aa12.59□□□□□ -0.39
PSMC1-203ENST00000553835 POLR3GLQ9BT43 218 aa12.59□□□□□ -0.39
PSMC1-203ENST00000553835 CDHR2Q9BYE9 1310 aa12.59□□□□□ -0.39
PSMC1-203ENST00000553835 EYSQ5T1H1 3165 aa12.59□□□□□ -0.39
PSMC1-203ENST00000553835 LAMB4A4D0S4 1761 aa12.58□□□□□ -0.39
PSMC1-203ENST00000553835 OTOP1Q7RTM1 612 aa12.58□□□□□ -0.4
PSMC1-203ENST00000553835 TMC1Q8TDI8 760 aa12.58□□□□□ -0.4
PSMC1-203ENST00000553835 MTMR10Q9NXD2 777 aa12.58□□□□□ -0.4
PSMC1-203ENST00000553835 ZBTB1Q9Y2K1 713 aa12.58□□□□□ -0.4
PSMC1-203ENST00000553835 MRC1P22897 1456 aa12.58□□□□□ -0.4
PSMC1-203ENST00000553835 HSP90AB1P08238 724 aaKnown RBP12.57□□□□□ -0.4
PSMC1-203ENST00000553835 DEFB123Q8N688 67 aa12.57□□□□□ -0.4
PSMC1-203ENST00000553835 SYNGAP1Q96PV0 1343 aa12.57□□□□□ -0.4
PSMC1-203ENST00000553835 EIF5P55010 431 aaKnown RBP12.56□□□□□ -0.4
PSMC1-203ENST00000553835 CABP4P57796 275 aa12.56□□□□□ -0.4
PSMC1-203ENST00000553835 CNBD1Q8NA66 436 aa12.56□□□□□ -0.4
PSMC1-203ENST00000553835 R3HDMLQ9H3Y0 253 aa12.56□□□□□ -0.4
PSMC1-203ENST00000553835 PTPN22Q9Y2R2 807 aa12.56□□□□□ -0.4
PSMC1-203ENST00000553835 ANKRD26Q9UPS8 1709 aa12.55□□□□□ -0.4
PSMC1-203ENST00000553835 TRPM4Q8TD43 1214 aa12.55□□□□□ -0.4
PSMC1-203ENST00000553835 ZNF333Q96JL9 665 aa12.55□□□□□ -0.4
PSMC1-203ENST00000553835 PIEZO1Q92508 2521 aa12.55□□□□□ -0.4
PSMC1-203ENST00000553835 KIF7Q2M1P5 1343 aa12.55□□□□□ -0.4
PSMC1-203ENST00000553835 ST5P78524 1137 aa12.54□□□□□ -0.4
PSMC1-203ENST00000553835 EYA1Q99502 592 aa12.54□□□□□ -0.4
PSMC1-203ENST00000553835 TRIM17Q9Y577 477 aa12.54□□□□□ -0.4
PSMC1-203ENST00000553835 LAMA2P24043 3122 aaKnown RBP12.54□□□□□ -0.4
PSMC1-203ENST00000553835 GMPSP49915 693 aaPredicted RBP12.53□□□□□ -0.4
PSMC1-203ENST00000553835 CXCL9Q07325 125 aa12.53□□□□□ -0.4
PSMC1-203ENST00000553835 CC2D2BQ6DHV5 1058 aa12.53□□□□□ -0.4
PSMC1-203ENST00000553835 NFATC2IPQ8NCF5 419 aa12.53□□□□□ -0.4
PSMC1-203ENST00000553835 TMEM106CQ9BVX2 250 aa12.53□□□□□ -0.4
PSMC1-203ENST00000553835 SCN7AQ01118 1682 aa12.53□□□□□ -0.4
PSMC1-203ENST00000553835 WASHC2AQ641Q2 1341 aa12.53□□□□□ -0.4
PSMC1-203ENST00000553835 NPC1L1Q9UHC9 1359 aa12.53□□□□□ -0.4
PSMC1-203ENST00000553835 PRUNE2Q8WUY3 3088 aa12.53□□□□□ -0.4
PSMC1-203ENST00000553835 GRIPAP1Q4V328 841 aa12.52□□□□□ -0.41
PSMC1-203ENST00000553835 Q7L0L9 218 aa12.52□□□□□ -0.41
PSMC1-203ENST00000553835 LARGE2Q8N3Y3 721 aa12.52□□□□□ -0.41
PSMC1-203ENST00000553835 A0A087WZG4 1122 aa12.51□□□□□ -0.41
PSMC1-203ENST00000553835 ZNF316A6NFI3 1004 aaPredicted RBP12.51□□□□□ -0.41
PSMC1-203ENST00000553835 FYB1O15117 783 aa12.51□□□□□ -0.41
PSMC1-203ENST00000553835 KRT26Q7Z3Y9 468 aa12.51□□□□□ -0.41
PSMC1-203ENST00000553835 ALDH1B1P30837 517 aa12.5□□□□□ -0.41
PSMC1-203ENST00000553835 UBE2Q1Q7Z7E8 422 aa12.5□□□□□ -0.41
PSMC1-203ENST00000553835 SETDB2Q96T68 719 aa12.5□□□□□ -0.41
PSMC1-203ENST00000553835 VPS33BQ9H267 617 aa12.5□□□□□ -0.41
PSMC1-203ENST00000553835 PANK3Q9H999 370 aa12.5□□□□□ -0.41
PSMC1-203ENST00000553835 ZBTB7BO15156 539 aaPredicted RBP12.49□□□□□ -0.41
PSMC1-203ENST00000553835 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
PSMC1-203ENST00000553835 ARIH1Q9Y4X5 557 aaPredicted RBP12.49□□□□□ -0.41
PSMC1-203ENST00000553835 FKBP1BP68106 108 aa12.48□□□□□ -0.41
PSMC1-203ENST00000553835 VSIG10Q8N0Z9 540 aa12.48□□□□□ -0.41
PSMC1-203ENST00000553835 CARD14Q9BXL6 1004 aa12.48□□□□□ -0.41
PSMC1-203ENST00000553835 ZNF609O15014 1411 aa12.47□□□□□ -0.41
PSMC1-203ENST00000553835 WTIPA6NIX2 430 aaPredicted RBP12.47□□□□□ -0.41
PSMC1-203ENST00000553835 ADM5C9JUS6 153 aa12.47□□□□□ -0.41
PSMC1-203ENST00000553835 DPF3Q92784 378 aa12.47□□□□□ -0.41
PSMC1-203ENST00000553835 CNOT7Q9UIV1 285 aaKnown RBP12.47□□□□□ -0.41
PSMC1-203ENST00000553835 ZNRF3Q9ULT6 936 aa12.47□□□□□ -0.41
PSMC1-203ENST00000553835 SHTN1A0MZ66 631 aa12.46□□□□□ -0.41
PSMC1-203ENST00000553835 LRIT3Q3SXY7 679 aa12.46□□□□□ -0.41
PSMC1-203ENST00000553835 CAMTA2O94983 1202 aa12.45□□□□□ -0.42
PSMC1-203ENST00000553835 BMP8BP34820 402 aa12.45□□□□□ -0.42
PSMC1-203ENST00000553835 MTHFSP49914 203 aa12.45□□□□□ -0.42
PSMC1-203ENST00000553835 DDX10Q13206 875 aaKnown RBP12.45□□□□□ -0.42
PSMC1-203ENST00000553835 CRY2Q49AN0 593 aa12.45□□□□□ -0.42
PSMC1-203ENST00000553835 EMILIN1Q9Y6C2 1016 aa12.45□□□□□ -0.42
PSMC1-203ENST00000553835 KDM3BQ7LBC6 1761 aa12.45□□□□□ -0.42
PSMC1-203ENST00000553835 RPTORQ8N122 1335 aa12.44□□□□□ -0.42
PSMC1-203ENST00000553835 POLR2AP24928 1970 aaKnown RBP12.44□□□□□ -0.42
PSMC1-203ENST00000553835 CANXP27824 592 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms