RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 ERC2O15083 957 aa10.11□□□□□ -0.79
RAB5B-210ENST00000553116 REC8O95072 547 aa10.11□□□□□ -0.79
RAB5B-210ENST00000553116 TCIRG1Q13488 830 aa10.11□□□□□ -0.79
RAB5B-210ENST00000553116 STAP2Q9UGK3 403 aa10.11□□□□□ -0.79
RAB5B-210ENST00000553116 AOX1Q06278 1338 aa10.11□□□□□ -0.79
RAB5B-210ENST00000553116 MAP3K15Q6ZN16 1313 aa10.11□□□□□ -0.79
RAB5B-210ENST00000553116 PALLDQ8WX93 1383 aa10.11□□□□□ -0.79
RAB5B-210ENST00000553116 LOC102724428A0A0B4J2F2 783 aa10.1□□□□□ -0.79
RAB5B-210ENST00000553116 KCNQ2O43526 872 aa10.1□□□□□ -0.79
RAB5B-210ENST00000553116 SIK1P57059 783 aa10.1□□□□□ -0.79
RAB5B-210ENST00000553116 TBC1D2BQ9UPU7 963 aa10.1□□□□□ -0.79
RAB5B-210ENST00000553116 DZIP3Q86Y13 1208 aaKnown RBP10.1□□□□□ -0.79
RAB5B-210ENST00000553116 HSCBQ8IWL3 235 aa10.1□□□□□ -0.79
RAB5B-210ENST00000553116 CCDC8Q9H0W5 538 aaPredicted RBP10.1□□□□□ -0.79
RAB5B-210ENST00000553116 H7C1W4 665 aa10.1□□□□□ -0.79
RAB5B-210ENST00000553116 HSP90AB3PQ58FF7 597 aa10.1□□□□□ -0.79
RAB5B-210ENST00000553116 CNTROBQ8N137 903 aa10.1□□□□□ -0.79
RAB5B-210ENST00000553116 FNBP4Q8N3X1 1017 aaPredicted RBP10.1□□□□□ -0.79
RAB5B-210ENST00000553116 SMARCC1Q92922 1105 aaPredicted RBP10.1□□□□□ -0.79
RAB5B-210ENST00000553116 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.09□□□□□ -0.79
RAB5B-210ENST00000553116 GLRX3O76003 335 aaKnown RBP10.09□□□□□ -0.79
RAB5B-210ENST00000553116 CCDC85AQ96PX6 553 aaPredicted RBP10.09□□□□□ -0.79
RAB5B-210ENST00000553116 TJP1Q07157 1748 aa10.09□□□□□ -0.79
RAB5B-210ENST00000553116 SASH1O94885 1247 aa10.09□□□□□ -0.79
RAB5B-210ENST00000553116 IL6STP40189 918 aaPredicted RBP10.09□□□□□ -0.79
RAB5B-210ENST00000553116 RBM25P49756 843 aaKnown RBP10.09□□□□□ -0.79
RAB5B-210ENST00000553116 TAF7LQ5H9L4 462 aa10.09□□□□□ -0.79
RAB5B-210ENST00000553116 GIGYF2Q6Y7W6 1299 aaKnown RBP10.09□□□□□ -0.79
RAB5B-210ENST00000553116 FAM89AQ96GI7 184 aa10.09□□□□□ -0.79
RAB5B-210ENST00000553116 ECHDC1Q9NTX5 307 aa10.09□□□□□ -0.79
RAB5B-210ENST00000553116 CCDC87Q9NVE4 849 aa10.09□□□□□ -0.79
RAB5B-210ENST00000553116 TTC41PQ6P2S7 1318 aa10.09□□□□□ -0.79
RAB5B-210ENST00000553116 CRKLP46109 303 aaKnown RBP10.09□□□□□ -0.79
RAB5B-210ENST00000553116 CASP7P55210 303 aa10.09□□□□□ -0.79
RAB5B-210ENST00000553116 HLFQ16534 295 aa10.09□□□□□ -0.79
RAB5B-210ENST00000553116 RABL6Q3YEC7 729 aaPredicted RBP10.09□□□□□ -0.79
RAB5B-210ENST00000553116 SPRYD3Q8NCJ5 442 aa10.09□□□□□ -0.79
RAB5B-210ENST00000553116 ISCA1Q9BUE6 129 aa10.09□□□□□ -0.79
RAB5B-210ENST00000553116 SLKQ9H2G2 1235 aaPredicted RBP10.09□□□□□ -0.79
RAB5B-210ENST00000553116 PTPN12Q05209 780 aaKnown RBP10.08□□□□□ -0.8
RAB5B-210ENST00000553116 COPRSQ9NQ92 184 aa10.08□□□□□ -0.8
RAB5B-210ENST00000553116 AFF2P51816 1311 aa10.08□□□□□ -0.8
RAB5B-210ENST00000553116 FAM182BQ5T319 152 aa10.08□□□□□ -0.8
RAB5B-210ENST00000553116 PI4K2BQ8TCG2 481 aa10.08□□□□□ -0.8
RAB5B-210ENST00000553116 TBC1D2Q9BYX2 928 aa10.08□□□□□ -0.8
RAB5B-210ENST00000553116 ANO2Q9NQ90 1003 aa10.08□□□□□ -0.8
RAB5B-210ENST00000553116 FAM177BA6PVY3 158 aa10.07□□□□□ -0.8
RAB5B-210ENST00000553116 CCDC57Q2TAC2 916 aa10.07□□□□□ -0.8
RAB5B-210ENST00000553116 EAF2Q96CJ1 260 aaPredicted RBP10.07□□□□□ -0.8
RAB5B-210ENST00000553116 TUBGCP6Q96RT7 1819 aa10.07□□□□□ -0.8
RAB5B-210ENST00000553116 COL15A1P39059 1388 aa10.07□□□□□ -0.8
RAB5B-210ENST00000553116 FOXO4P98177 505 aa10.07□□□□□ -0.8
RAB5B-210ENST00000553116 TFCP2Q12800 502 aa10.07□□□□□ -0.8
RAB5B-210ENST00000553116 TRMT112Q9UI30 125 aaKnown RBP10.07□□□□□ -0.8
RAB5B-210ENST00000553116 CHMLP26374 656 aa10.07□□□□□ -0.8
RAB5B-210ENST00000553116 ITPK1Q13572 414 aa10.07□□□□□ -0.8
RAB5B-210ENST00000553116 ESYT1Q9BSJ8 1104 aa10.07□□□□□ -0.8
RAB5B-210ENST00000553116 DIAPH3Q9NSV4 1193 aa10.07□□□□□ -0.8
RAB5B-210ENST00000553116 NUP98P52948 1817 aa10.06□□□□□ -0.8
RAB5B-210ENST00000553116 PCCAP05165 728 aaPredicted RBP10.06□□□□□ -0.8
RAB5B-210ENST00000553116 HSP90AA1P07900 732 aaKnown RBP10.06□□□□□ -0.8
RAB5B-210ENST00000553116 MCCP23508 829 aa10.06□□□□□ -0.8
RAB5B-210ENST00000553116 RFX5P48382 616 aaPredicted RBP10.06□□□□□ -0.8
RAB5B-210ENST00000553116 ZBTB38Q8NAP3 1195 aaPredicted RBP10.06□□□□□ -0.8
RAB5B-210ENST00000553116 TLR7Q9NYK1 1049 aaKnown RBP10.06□□□□□ -0.8
RAB5B-210ENST00000553116 NLRP10Q86W26 655 aa10.06□□□□□ -0.8
RAB5B-210ENST00000553116 ZNF594Q96JF6 807 aaPredicted RBP10.06□□□□□ -0.8
RAB5B-210ENST00000553116 GJD4Q96KN9 370 aaPredicted RBP10.06□□□□□ -0.8
RAB5B-210ENST00000553116 NEUROD6Q96NK8 337 aa10.06□□□□□ -0.8
RAB5B-210ENST00000553116 USP26Q9BXU7 913 aa10.06□□□□□ -0.8
RAB5B-210ENST00000553116 KCNQ4P56696 695 aa10.05□□□□□ -0.8
RAB5B-210ENST00000553116 TRIM28Q13263 835 aaKnown RBP10.05□□□□□ -0.8
RAB5B-210ENST00000553116 BOLA2Q9H3K6 86 aa10.05□□□□□ -0.8
RAB5B-210ENST00000553116 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.05□□□□□ -0.8
RAB5B-210ENST00000553116 ANKRD36CQ5JPF3 1778 aa10.05□□□□□ -0.8
RAB5B-210ENST00000553116 TNNI3KQ59H18 835 aa10.05□□□□□ -0.8
RAB5B-210ENST00000553116 FPGT-TNNI3KV9GXZ4 949 aa10.05□□□□□ -0.8
RAB5B-210ENST00000553116 ERVV-1B6SEH8 477 aa10.05□□□□□ -0.8
RAB5B-210ENST00000553116 IFIT5Q13325 482 aaKnown RBP10.05□□□□□ -0.8
RAB5B-210ENST00000553116 INTS5Q6P9B9 1019 aaKnown RBP10.05□□□□□ -0.8
RAB5B-210ENST00000553116 CWC27Q6UX04 472 aaKnown RBP10.05□□□□□ -0.8
RAB5B-210ENST00000553116 TRPC5Q9UL62 973 aaPredicted RBP10.05□□□□□ -0.8
RAB5B-210ENST00000553116 USP42Q9H9J4 1324 aaKnown RBP10.04□□□□□ -0.8
RAB5B-210ENST00000553116 IRS4O14654 1257 aaPredicted RBP10.04□□□□□ -0.8
RAB5B-210ENST00000553116 EIF5P55010 431 aaKnown RBP10.04□□□□□ -0.8
RAB5B-210ENST00000553116 KIAA1211Q6ZU35 1233 aa10.04□□□□□ -0.8
RAB5B-210ENST00000553116 SYNE4Q8N205 404 aa10.04□□□□□ -0.8
RAB5B-210ENST00000553116 UBE2Q2Q8WVN8 375 aa10.04□□□□□ -0.8
RAB5B-210ENST00000553116 IL15P40933 162 aaPredicted RBP10.04□□□□□ -0.8
RAB5B-210ENST00000553116 FSD1Q9BTV5 496 aa10.04□□□□□ -0.8
RAB5B-210ENST00000553116 MYH14Q7Z406 1995 aaKnown RBP10.04□□□□□ -0.8
RAB5B-210ENST00000553116 EYA2O00167 538 aa10.04□□□□□ -0.8
RAB5B-210ENST00000553116 RUFY2Q8WXA3 655 aa10.04□□□□□ -0.8
RAB5B-210ENST00000553116 EVI5LQ96CN4 794 aa10.04□□□□□ -0.8
RAB5B-210ENST00000553116 RABEP1Q15276 862 aa10.03□□□□□ -0.8
RAB5B-210ENST00000553116 LRRC24Q50LG9 513 aa10.03□□□□□ -0.8
RAB5B-210ENST00000553116 DNAJC2Q99543 621 aaKnown RBP10.03□□□□□ -0.8
RAB5B-210ENST00000553116 ZNF652Q9Y2D9 606 aa10.03□□□□□ -0.8
RAB5B-210ENST00000553116 PTF1AQ7RTS3 328 aa10.03□□□□□ -0.8
RAB5B-210ENST00000553116 DBNDD2Q9BQY9 259 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms