RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 ZNF330Q9Y3S2 320 aaPredicted RBP13.34□□□□□ -0.27
PFDN5-216ENST00000552341 COL5A3P25940 1745 aaPredicted RBP13.34□□□□□ -0.27
PFDN5-216ENST00000552341 PALLDQ8WX93 1383 aa13.33□□□□□ -0.28
PFDN5-216ENST00000552341 HLFQ16534 295 aa13.33□□□□□ -0.28
PFDN5-216ENST00000552341 KIF6Q6ZMV9 814 aa13.33□□□□□ -0.28
PFDN5-216ENST00000552341 SLC4A3P48751 1232 aa13.32□□□□□ -0.28
PFDN5-216ENST00000552341 EIF5P55010 431 aaKnown RBP13.32□□□□□ -0.28
PFDN5-216ENST00000552341 OS9Q13438 667 aaPredicted RBP13.32□□□□□ -0.28
PFDN5-216ENST00000552341 LMBR1LQ6UX01 489 aa13.32□□□□□ -0.28
PFDN5-216ENST00000552341 KIF2CQ99661 725 aa13.32□□□□□ -0.28
PFDN5-216ENST00000552341 ATP6V1AP38606 617 aa13.32□□□□□ -0.28
PFDN5-216ENST00000552341 G3BP1Q13283 466 aaKnown RBP eCLIP13.32□□□□□ -0.28
PFDN5-216ENST00000552341 CLASRPQ8N2M8 674 aaKnown RBP13.32□□□□□ -0.28
PFDN5-216ENST00000552341 TTC41PQ6P2S7 1318 aa13.31□□□□□ -0.28
PFDN5-216ENST00000552341 ERVV-1B6SEH8 477 aa13.31□□□□□ -0.28
PFDN5-216ENST00000552341 ONECUT3O60422 494 aaPredicted RBP13.31□□□□□ -0.28
PFDN5-216ENST00000552341 CRKLP46109 303 aaKnown RBP13.31□□□□□ -0.28
PFDN5-216ENST00000552341 RTL5Q5HYW3 569 aaPredicted RBP13.31□□□□□ -0.28
PFDN5-216ENST00000552341 PTF1AQ7RTS3 328 aa13.31□□□□□ -0.28
PFDN5-216ENST00000552341 EAF2Q96CJ1 260 aaPredicted RBP13.31□□□□□ -0.28
PFDN5-216ENST00000552341 GJD4Q96KN9 370 aaPredicted RBP13.31□□□□□ -0.28
PFDN5-216ENST00000552341 SIL1Q9H173 461 aa13.31□□□□□ -0.28
PFDN5-216ENST00000552341 CCDC87Q9NVE4 849 aa13.31□□□□□ -0.28
PFDN5-216ENST00000552341 ATRNO75882 1429 aa13.31□□□□□ -0.28
PFDN5-216ENST00000552341 AK9Q5TCS8 1911 aa13.31□□□□□ -0.28
PFDN5-216ENST00000552341 AFF2P51816 1311 aa13.31□□□□□ -0.28
PFDN5-216ENST00000552341 SMARCC1Q92922 1105 aaPredicted RBP13.31□□□□□ -0.28
PFDN5-216ENST00000552341 NHSQ6T4R5 1651 aa13.3□□□□□ -0.28
PFDN5-216ENST00000552341 A0A0G2JS52 829 aa13.3□□□□□ -0.28
PFDN5-216ENST00000552341 PCCAP05165 728 aaPredicted RBP13.3□□□□□ -0.28
PFDN5-216ENST00000552341 NLRP10Q86W26 655 aa13.3□□□□□ -0.28
PFDN5-216ENST00000552341 USP26Q9BXU7 913 aa13.3□□□□□ -0.28
PFDN5-216ENST00000552341 BTAF1O14981 1849 aa13.3□□□□□ -0.28
PFDN5-216ENST00000552341 PRKCSHP14314 528 aaPredicted RBP13.29□□□□□ -0.28
PFDN5-216ENST00000552341 DZIP3Q86Y13 1208 aaKnown RBP13.29□□□□□ -0.28
PFDN5-216ENST00000552341 ZBTB38Q8NAP3 1195 aaPredicted RBP13.29□□□□□ -0.28
PFDN5-216ENST00000552341 PLA2G12BQ9BX93 195 aa13.29□□□□□ -0.28
PFDN5-216ENST00000552341 TBC1D2BQ9UPU7 963 aa13.29□□□□□ -0.28
PFDN5-216ENST00000552341 CHMLP26374 656 aa13.29□□□□□ -0.28
PFDN5-216ENST00000552341 HSP90AB3PQ58FF7 597 aa13.29□□□□□ -0.28
PFDN5-216ENST00000552341 MEX3CQ5U5Q3 659 aaKnown RBP13.29□□□□□ -0.28
PFDN5-216ENST00000552341 FAM89AQ96GI7 184 aa13.29□□□□□ -0.28
PFDN5-216ENST00000552341 SBF2Q86WG5 1849 aa13.28□□□□□ -0.28
PFDN5-216ENST00000552341 TRIM6-TRIM34B2RNG4 842 aa13.28□□□□□ -0.28
PFDN5-216ENST00000552341 EIF5BO60841 1220 aaKnown RBP13.28□□□□□ -0.28
PFDN5-216ENST00000552341 CASC1Q6TDU7 716 aa13.28□□□□□ -0.28
PFDN5-216ENST00000552341 ATG9AQ7Z3C6 839 aa13.28□□□□□ -0.28
PFDN5-216ENST00000552341 AACSQ86V21 672 aa13.28□□□□□ -0.28
PFDN5-216ENST00000552341 ZNF34Q8IZ26 560 aa13.28□□□□□ -0.28
PFDN5-216ENST00000552341 SYNE4Q8N205 404 aa13.28□□□□□ -0.28
PFDN5-216ENST00000552341 TBC1D2Q9BYX2 928 aa13.28□□□□□ -0.28
PFDN5-216ENST00000552341 ECHDC1Q9NTX5 307 aa13.28□□□□□ -0.28
PFDN5-216ENST00000552341 UBN2Q6ZU65 1347 aa13.28□□□□□ -0.28
PFDN5-216ENST00000552341 CDHR2Q9BYE9 1310 aa13.28□□□□□ -0.28
PFDN5-216ENST00000552341 GLRX3O76003 335 aaKnown RBP13.27□□□□□ -0.28
PFDN5-216ENST00000552341 IFIT2P09913 472 aaKnown RBP13.27□□□□□ -0.28
PFDN5-216ENST00000552341 RILPL2Q969X0 211 aa13.27□□□□□ -0.28
PFDN5-216ENST00000552341 ARXQ96QS3 562 aa13.27□□□□□ -0.28
PFDN5-216ENST00000552341 TLR7Q9NYK1 1049 aaKnown RBP13.27□□□□□ -0.28
PFDN5-216ENST00000552341 ERC2O15083 957 aa13.27□□□□□ -0.29
PFDN5-216ENST00000552341 CSF1RP07333 972 aa13.27□□□□□ -0.29
PFDN5-216ENST00000552341 GPTP24298 496 aa13.27□□□□□ -0.29
PFDN5-216ENST00000552341 TFCP2Q12800 502 aa13.27□□□□□ -0.29
PFDN5-216ENST00000552341 FAM182BQ5T319 152 aa13.27□□□□□ -0.29
PFDN5-216ENST00000552341 ESYT1Q9BSJ8 1104 aa13.27□□□□□ -0.29
PFDN5-216ENST00000552341 CCDC8Q9H0W5 538 aaPredicted RBP13.27□□□□□ -0.29
PFDN5-216ENST00000552341 CAMTA2O94983 1202 aa13.26□□□□□ -0.29
PFDN5-216ENST00000552341 MAP4K4O95819 1239 aaPredicted RBP13.26□□□□□ -0.29
PFDN5-216ENST00000552341 LINC00116Q8NCU8 138 aa13.26□□□□□ -0.29
PFDN5-216ENST00000552341 TRPC5Q9UL62 973 aaPredicted RBP13.26□□□□□ -0.29
PFDN5-216ENST00000552341 MYH3P11055 1940 aa13.26□□□□□ -0.29
PFDN5-216ENST00000552341 BECN1Q14457 450 aa13.25□□□□□ -0.29
PFDN5-216ENST00000552341 IL25Q9H293 177 aa13.25□□□□□ -0.29
PFDN5-216ENST00000552341 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
PFDN5-216ENST00000552341 EP400Q96L91 3159 aa13.25□□□□□ -0.29
PFDN5-216ENST00000552341 REC8O95072 547 aa13.25□□□□□ -0.29
PFDN5-216ENST00000552341 TNNI3KQ59H18 835 aa13.25□□□□□ -0.29
PFDN5-216ENST00000552341 CHMP3Q9Y3E7 222 aa13.25□□□□□ -0.29
PFDN5-216ENST00000552341 FPGT-TNNI3KV9GXZ4 949 aa13.25□□□□□ -0.29
PFDN5-216ENST00000552341 LY75O60449 1722 aa13.25□□□□□ -0.29
PFDN5-216ENST00000552341 KCNQ4P56696 695 aa13.24□□□□□ -0.29
PFDN5-216ENST00000552341 CNTROBQ8N137 903 aa13.24□□□□□ -0.29
PFDN5-216ENST00000552341 GPATCH3Q96I76 525 aa13.24□□□□□ -0.29
PFDN5-216ENST00000552341 ZNF594Q96JF6 807 aaPredicted RBP13.24□□□□□ -0.29
PFDN5-216ENST00000552341 DAXXQ9UER7 740 aaPredicted RBP13.24□□□□□ -0.29
PFDN5-216ENST00000552341 DBNLQ9UJU6 430 aaKnown RBP13.24□□□□□ -0.29
PFDN5-216ENST00000552341 EYA2O00167 538 aa13.23□□□□□ -0.29
PFDN5-216ENST00000552341 CIAO1O76071 339 aa13.23□□□□□ -0.29
PFDN5-216ENST00000552341 LRRC24Q50LG9 513 aa13.23□□□□□ -0.29
PFDN5-216ENST00000552341 TTLL11Q8NHH1 800 aa13.23□□□□□ -0.29
PFDN5-216ENST00000552341 SNX21Q969T3 373 aa13.23□□□□□ -0.29
PFDN5-216ENST00000552341 CNTNAP4Q9C0A0 1308 aa13.23□□□□□ -0.29
PFDN5-216ENST00000552341 IL15P40933 162 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-216ENST00000552341 SEPT12Q8IYM1 358 aa13.23□□□□□ -0.29
PFDN5-216ENST00000552341 PUS3Q9BZE2 481 aaKnown RBP13.23□□□□□ -0.29
PFDN5-216ENST00000552341 TRMT112Q9UI30 125 aaKnown RBP13.23□□□□□ -0.29
PFDN5-216ENST00000552341 TAF1LQ8IZX4 1826 aa13.22□□□□□ -0.29
PFDN5-216ENST00000552341 IRS4O14654 1257 aaPredicted RBP13.22□□□□□ -0.29
PFDN5-216ENST00000552341 QTRT2Q9H974 415 aaKnown RBP13.22□□□□□ -0.29
PFDN5-216ENST00000552341 GPR108Q9NPR9 543 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms