RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 ST5P78524 1137 aa22.24■■□□□ 1.15
CDK4-208ENST00000551706 TPTE2Q6XPS3 522 aa22.24■■□□□ 1.15
CDK4-208ENST00000551706 DDX58O95786 925 aaKnown RBP22.23■■□□□ 1.15
CDK4-208ENST00000551706 PRR5LQ6MZQ0 368 aa22.23■■□□□ 1.15
CDK4-208ENST00000551706 ZNF34Q8IZ26 560 aa22.23■■□□□ 1.15
CDK4-208ENST00000551706 NYXQ9GZU5 481 aa22.23■■□□□ 1.15
CDK4-208ENST00000551706 CREBZFQ9NS37 354 aa22.23■■□□□ 1.15
CDK4-208ENST00000551706 MKRN1Q9UHC7 482 aaKnown RBP22.23■■□□□ 1.15
CDK4-208ENST00000551706 PDZRN3Q9UPQ7 1066 aa22.23■■□□□ 1.15
CDK4-208ENST00000551706 TIAM2Q8IVF5 1701 aa22.23■■□□□ 1.15
CDK4-208ENST00000551706 HNRNPUQ00839 825 aaKnown RBP eCLIP22.22■■□□□ 1.15
CDK4-208ENST00000551706 PARP10Q53GL7 1025 aa22.22■■□□□ 1.15
CDK4-208ENST00000551706 BRIP1Q9BX63 1249 aa22.22■■□□□ 1.15
CDK4-208ENST00000551706 PRDM10Q9NQV6 1147 aa22.22■■□□□ 1.15
CDK4-208ENST00000551706 IBTKQ9P2D0 1353 aaPredicted RBP22.22■■□□□ 1.15
CDK4-208ENST00000551706 POTECB2RU33 542 aa22.21■■□□□ 1.15
CDK4-208ENST00000551706 FOXN1O15353 648 aa22.21■■□□□ 1.15
CDK4-208ENST00000551706 GPTP24298 496 aa22.21■■□□□ 1.15
CDK4-208ENST00000551706 TCIRG1Q13488 830 aa22.21■■□□□ 1.15
CDK4-208ENST00000551706 PHAXQ9H814 394 aaKnown RBP22.21■■□□□ 1.15
CDK4-208ENST00000551706 AFDNP55196 1824 aaKnown RBP22.2■■□□□ 1.14
CDK4-208ENST00000551706 SLC4A2P04920 1241 aa22.2■■□□□ 1.14
CDK4-208ENST00000551706 GTF2E1P29083 439 aaPredicted RBP22.2■■□□□ 1.14
CDK4-208ENST00000551706 PDE6BP35913 854 aa22.2■■□□□ 1.14
CDK4-208ENST00000551706 DPY19L2Q6NUT2 758 aa22.2■■□□□ 1.14
CDK4-208ENST00000551706 PPP1R42Q7Z4L9 355 aa22.2■■□□□ 1.14
CDK4-208ENST00000551706 RIC3Q7Z5B4 369 aa22.2■■□□□ 1.14
CDK4-208ENST00000551706 TRMT2AQ8IZ69 625 aaKnown RBP22.2■■□□□ 1.14
CDK4-208ENST00000551706 CDCA7LQ96GN5 454 aa22.2■■□□□ 1.14
CDK4-208ENST00000551706 UBN2Q6ZU65 1347 aa22.19■■□□□ 1.14
CDK4-208ENST00000551706 NUP98P52948 1817 aa22.19■■□□□ 1.14
CDK4-208ENST00000551706 CCDC88AQ3V6T2 1871 aa22.19■■□□□ 1.14
CDK4-208ENST00000551706 FAM177BA6PVY3 158 aa22.18■■□□□ 1.14
CDK4-208ENST00000551706 TCERG1O14776 1098 aaKnown RBP22.18■■□□□ 1.14
CDK4-208ENST00000551706 ZNF428Q96B54 188 aa22.18■■□□□ 1.14
CDK4-208ENST00000551706 RNF123Q5XPI4 1314 aa22.17■■□□□ 1.14
CDK4-208ENST00000551706 H0YIN7 160 aa22.17■■□□□ 1.14
CDK4-208ENST00000551706 TTLL6Q8N841 843 aa22.17■■□□□ 1.14
CDK4-208ENST00000551706 CT47B1P0C2W7 299 aaPredicted RBP22.16■■□□□ 1.14
CDK4-208ENST00000551706 SUSD4Q5VX71 490 aa22.16■■□□□ 1.14
CDK4-208ENST00000551706 CHADLQ6NUI6 762 aa22.16■■□□□ 1.14
CDK4-208ENST00000551706 NLRP10Q86W26 655 aa22.16■■□□□ 1.14
CDK4-208ENST00000551706 C2CD5Q86YS7 1000 aa22.16■■□□□ 1.14
CDK4-208ENST00000551706 UTP14AQ9BVJ6 771 aaKnown RBP22.16■■□□□ 1.14
CDK4-208ENST00000551706 DLEC1Q9Y238 1755 aa22.15■■□□□ 1.14
CDK4-208ENST00000551706 NFKBIEO00221 500 aa22.15■■□□□ 1.14
CDK4-208ENST00000551706 CTCFP49711 727 aaPredicted RBP22.15■■□□□ 1.14
CDK4-208ENST00000551706 FLIIQ13045 1269 aa22.15■■□□□ 1.14
CDK4-208ENST00000551706 KSR2Q6VAB6 950 aa22.15■■□□□ 1.14
CDK4-208ENST00000551706 CCDC24Q8N4L8 307 aa22.15■■□□□ 1.14
CDK4-208ENST00000551706 AIDAQ96BJ3 306 aa22.15■■□□□ 1.14
CDK4-208ENST00000551706 ISCA1Q9BUE6 129 aa22.15■■□□□ 1.14
CDK4-208ENST00000551706 CNTNAP1P78357 1384 aa22.14■■□□□ 1.14
CDK4-208ENST00000551706 NTSR2O95665 410 aa22.14■■□□□ 1.13
CDK4-208ENST00000551706 TRIM28Q13263 835 aaKnown RBP22.14■■□□□ 1.13
CDK4-208ENST00000551706 ZBED9Q6R2W3 1325 aa22.13■■□□□ 1.13
CDK4-208ENST00000551706 G2E3Q7L622 706 aa22.13■■□□□ 1.13
CDK4-208ENST00000551706 METTL22Q9BUU2 404 aaPredicted RBP22.13■■□□□ 1.13
CDK4-208ENST00000551706 MAP3K2Q9Y2U5 619 aa22.13■■□□□ 1.13
CDK4-208ENST00000551706 KLRG2A4D1S0 409 aaPredicted RBP22.12■■□□□ 1.13
CDK4-208ENST00000551706 PI4KAP2A4QPH2 592 aa22.12■■□□□ 1.13
CDK4-208ENST00000551706 FKBP5Q13451 457 aaPredicted RBP22.12■■□□□ 1.13
CDK4-208ENST00000551706 ERFEQ4G0M1 354 aa22.12■■□□□ 1.13
CDK4-208ENST00000551706 NUTM1Q86Y26 1132 aa22.12■■□□□ 1.13
CDK4-208ENST00000551706 PI4KAP1Q8N8J0 262 aa22.12■■□□□ 1.13
CDK4-208ENST00000551706 RIC1Q4ADV7 1423 aa22.12■■□□□ 1.13
CDK4-208ENST00000551706 ATP5J2-PTCD1G3V325 749 aa22.11■■□□□ 1.13
CDK4-208ENST00000551706 FAM161AQ3B820 660 aa22.11■■□□□ 1.13
CDK4-208ENST00000551706 MYD88Q99836 296 aa22.11■■□□□ 1.13
CDK4-208ENST00000551706 PCDH10Q9P2E7 1040 aa22.11■■□□□ 1.13
CDK4-208ENST00000551706 TRMT112Q9UI30 125 aaKnown RBP22.11■■□□□ 1.13
CDK4-208ENST00000551706 ANKRD36CQ5JPF3 1778 aa22.11■■□□□ 1.13
CDK4-208ENST00000551706 SH3TC1Q8TE82 1336 aa22.1■■□□□ 1.13
CDK4-208ENST00000551706 NEXNQ0ZGT2 675 aa22.1■■□□□ 1.13
CDK4-208ENST00000551706 CCDC191Q8NCU4 936 aa22.1■■□□□ 1.13
CDK4-208ENST00000551706 ABCC12Q96J65 1359 aa22.1■■□□□ 1.13
CDK4-208ENST00000551706 ARFGEF2Q9Y6D5 1785 aa22.1■■□□□ 1.13
CDK4-208ENST00000551706 CACNA1FO60840 1977 aa22.09■■□□□ 1.13
CDK4-208ENST00000551706 POTEIP0CG38 1075 aa22.09■■□□□ 1.13
CDK4-208ENST00000551706 POTEJP0CG39 1038 aa22.09■■□□□ 1.13
CDK4-208ENST00000551706 SRGNP10124 158 aa22.09■■□□□ 1.13
CDK4-208ENST00000551706 ALDH1L2Q3SY69 923 aa22.09■■□□□ 1.13
CDK4-208ENST00000551706 SLC10A5Q5PT55 438 aa22.09■■□□□ 1.13
CDK4-208ENST00000551706 STYK1Q6J9G0 422 aa22.09■■□□□ 1.13
CDK4-208ENST00000551706 MASTLQ96GX5 879 aa22.09■■□□□ 1.13
CDK4-208ENST00000551706 NPR1P16066 1061 aa22.08■■□□□ 1.13
CDK4-208ENST00000551706 LBX1P52954 281 aa22.08■■□□□ 1.13
CDK4-208ENST00000551706 CNKSR1Q969H4 720 aa22.08■■□□□ 1.13
CDK4-208ENST00000551706 ZNF622Q969S3 477 aaKnown RBP eCLIP22.08■■□□□ 1.13
CDK4-208ENST00000551706 ANKRD31Q8N7Z5 1873 aa22.08■■□□□ 1.13
CDK4-208ENST00000551706 VEGFBP49765 207 aa22.07■■□□□ 1.12
CDK4-208ENST00000551706 ABHD8Q96I13 439 aa22.07■■□□□ 1.12
CDK4-208ENST00000551706 NLRP3Q96P20 1036 aa22.07■■□□□ 1.12
CDK4-208ENST00000551706 CWC25Q9NXE8 425 aaPredicted RBP22.07■■□□□ 1.12
CDK4-208ENST00000551706 DICER1Q9UPY3 1922 aaKnown RBP22.07■■□□□ 1.12
CDK4-208ENST00000551706 PASKQ96RG2 1323 aa22.06■■□□□ 1.12
CDK4-208ENST00000551706 HSP90B1P14625 803 aaKnown RBP22.06■■□□□ 1.12
CDK4-208ENST00000551706 CRY2Q49AN0 593 aa22.06■■□□□ 1.12
CDK4-208ENST00000551706 DNAAF4Q8WXU2 420 aa22.06■■□□□ 1.12
CDK4-208ENST00000551706 SSH1Q8WYL5 1049 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms