RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 PXDNLA1KZ92 1463 aa16.57■□□□□ 0.24
RAB5C-206ENST00000550406 IBTKQ9P2D0 1353 aaPredicted RBP16.57■□□□□ 0.24
RAB5C-206ENST00000550406 ABCC4O15439 1325 aa16.57■□□□□ 0.24
RAB5C-206ENST00000550406 IPO8O15397 1037 aaKnown RBP16.57■□□□□ 0.24
RAB5C-206ENST00000550406 ERFEQ4G0M1 354 aa16.57■□□□□ 0.24
RAB5C-206ENST00000550406 NBPF5PQ86XG9 351 aaPredicted RBP16.57■□□□□ 0.24
RAB5C-206ENST00000550406 NUTM1Q86Y26 1132 aa16.57■□□□□ 0.24
RAB5C-206ENST00000550406 CCDC191Q8NCU4 936 aa16.57■□□□□ 0.24
RAB5C-206ENST00000550406 JARID2Q92833 1246 aaPredicted RBP16.57■□□□□ 0.24
RAB5C-206ENST00000550406 UTP14AQ9BVJ6 771 aaKnown RBP16.57■□□□□ 0.24
RAB5C-206ENST00000550406 TNRC6CQ9HCJ0 1690 aaKnown RBP16.56■□□□□ 0.24
RAB5C-206ENST00000550406 RLBP1P12271 317 aa16.56■□□□□ 0.24
RAB5C-206ENST00000550406 NEXNQ0ZGT2 675 aa16.56■□□□□ 0.24
RAB5C-206ENST00000550406 GCKRQ14397 625 aa16.56■□□□□ 0.24
RAB5C-206ENST00000550406 PPP1R42Q7Z4L9 355 aa16.56■□□□□ 0.24
RAB5C-206ENST00000550406 CLUAP1Q96AJ1 413 aa16.56■□□□□ 0.24
RAB5C-206ENST00000550406 CWC25Q9NXE8 425 aaPredicted RBP16.56■□□□□ 0.24
RAB5C-206ENST00000550406 C10orf71Q711Q0 1435 aa16.55■□□□□ 0.24
RAB5C-206ENST00000550406 ABCC12Q96J65 1359 aa16.55■□□□□ 0.24
RAB5C-206ENST00000550406 ALDH1L1O75891 902 aa16.55■□□□□ 0.24
RAB5C-206ENST00000550406 CASP7P55210 303 aa16.55■□□□□ 0.24
RAB5C-206ENST00000550406 INTS3Q68E01 1043 aaKnown RBP16.55■□□□□ 0.24
RAB5C-206ENST00000550406 TPTE2Q6XPS3 522 aa16.55■□□□□ 0.24
RAB5C-206ENST00000550406 CNBD1Q8NA66 436 aa16.55■□□□□ 0.24
RAB5C-206ENST00000550406 SRCIN1Q9C0H9 1055 aa16.55■□□□□ 0.24
RAB5C-206ENST00000550406 TRMT112Q9UI30 125 aaKnown RBP16.55■□□□□ 0.24
RAB5C-206ENST00000550406 H7C1W4 665 aa16.54■□□□□ 0.24
RAB5C-206ENST00000550406 SLC10A5Q5PT55 438 aa16.54■□□□□ 0.24
RAB5C-206ENST00000550406 FAM89AQ96GI7 184 aa16.54■□□□□ 0.24
RAB5C-206ENST00000550406 NYXQ9GZU5 481 aa16.54■□□□□ 0.24
RAB5C-206ENST00000550406 MYH3P11055 1940 aa16.54■□□□□ 0.24
RAB5C-206ENST00000550406 COL11A2P13942 1736 aaPredicted RBP16.53■□□□□ 0.24
RAB5C-206ENST00000550406 RNF123Q5XPI4 1314 aa16.53■□□□□ 0.24
RAB5C-206ENST00000550406 PCCAP05165 728 aaPredicted RBP16.53■□□□□ 0.24
RAB5C-206ENST00000550406 RTL5Q5HYW3 569 aaPredicted RBP16.53■□□□□ 0.24
RAB5C-206ENST00000550406 C20orf194Q5TEA3 1177 aa16.53■□□□□ 0.24
RAB5C-206ENST00000550406 C3orf67Q6ZVT6 689 aa16.53■□□□□ 0.24
RAB5C-206ENST00000550406 TMEM57Q8N5G2 664 aa16.53■□□□□ 0.24
RAB5C-206ENST00000550406 ZBTB38Q8NAP3 1195 aaPredicted RBP16.53■□□□□ 0.24
RAB5C-206ENST00000550406 PANK1Q8TE04 598 aa16.53■□□□□ 0.24
RAB5C-206ENST00000550406 TAF1P21675 1872 aa16.52■□□□□ 0.24
RAB5C-206ENST00000550406 SH3TC1Q8TE82 1336 aa16.52■□□□□ 0.24
RAB5C-206ENST00000550406 DLEC1Q9Y238 1755 aa16.52■□□□□ 0.24
RAB5C-206ENST00000550406 HCLS1P14317 486 aaPredicted RBP16.52■□□□□ 0.24
RAB5C-206ENST00000550406 CCT4P50991 539 aaKnown RBP16.52■□□□□ 0.24
RAB5C-206ENST00000550406 DZIP1LQ8IYY4 767 aaKnown RBP16.52■□□□□ 0.24
RAB5C-206ENST00000550406 USP44Q9H0E7 712 aa16.52■□□□□ 0.24
RAB5C-206ENST00000550406 BRCA1P38398 1863 aaKnown RBP16.52■□□□□ 0.23
RAB5C-206ENST00000550406 KLRG2A4D1S0 409 aaPredicted RBP16.51■□□□□ 0.23
RAB5C-206ENST00000550406 BRIP1Q9BX63 1249 aa16.51■□□□□ 0.23
RAB5C-206ENST00000550406 FHDC1Q9C0D6 1143 aaPredicted RBP16.51■□□□□ 0.23
RAB5C-206ENST00000550406 CD2APQ9Y5K6 639 aa16.51■□□□□ 0.23
RAB5C-206ENST00000550406 RIC1Q4ADV7 1423 aa16.51■□□□□ 0.23
RAB5C-206ENST00000550406 UTYO14607 1347 aa16.5■□□□□ 0.23
RAB5C-206ENST00000550406 CDHR2Q9BYE9 1310 aa16.5■□□□□ 0.23
RAB5C-206ENST00000550406 NBPF7P0C2Y1 421 aaPredicted RBP16.5■□□□□ 0.23
RAB5C-206ENST00000550406 GTF2E1P29083 439 aaPredicted RBP16.5■□□□□ 0.23
RAB5C-206ENST00000550406 RRP1P56182 461 aaKnown RBP16.5■□□□□ 0.23
RAB5C-206ENST00000550406 ST5P78524 1137 aa16.5■□□□□ 0.23
RAB5C-206ENST00000550406 UBE3BQ7Z3V4 1068 aa16.5■□□□□ 0.23
RAB5C-206ENST00000550406 NLGN2Q8NFZ4 835 aa16.5■□□□□ 0.23
RAB5C-206ENST00000550406 GRM8O00222 908 aa16.49■□□□□ 0.23
RAB5C-206ENST00000550406 IRS4O14654 1257 aaPredicted RBP16.49■□□□□ 0.23
RAB5C-206ENST00000550406 KCNA3P22001 575 aa16.49■□□□□ 0.23
RAB5C-206ENST00000550406 CACNA1SQ13698 1873 aa16.49■□□□□ 0.23
RAB5C-206ENST00000550406 KAZALD1Q96I82 304 aa16.49■□□□□ 0.23
RAB5C-206ENST00000550406 SYT17Q9BSW7 474 aa16.49■□□□□ 0.23
RAB5C-206ENST00000550406 PPP1R1BQ9UD71 204 aaPredicted RBP16.49■□□□□ 0.23
RAB5C-206ENST00000550406 NPHP1O15259 732 aa16.48■□□□□ 0.23
RAB5C-206ENST00000550406 DPEP1P16444 411 aa16.48■□□□□ 0.23
RAB5C-206ENST00000550406 CHRNA5P30532 468 aa16.48■□□□□ 0.23
RAB5C-206ENST00000550406 KLHL34Q8N239 644 aa16.48■□□□□ 0.23
RAB5C-206ENST00000550406 SUPT16HQ9Y5B9 1047 aaKnown RBP16.48■□□□□ 0.23
RAB5C-206ENST00000550406 COL4A1P02462 1669 aa16.47■□□□□ 0.23
RAB5C-206ENST00000550406 A0A0G2JLW4 131 aa16.47■□□□□ 0.23
RAB5C-206ENST00000550406 TGFB2P61812 414 aa16.47■□□□□ 0.23
RAB5C-206ENST00000550406 PDE3AQ14432 1141 aa16.47■□□□□ 0.23
RAB5C-206ENST00000550406 EPHA10Q5JZY3 1008 aa16.47■□□□□ 0.23
RAB5C-206ENST00000550406 FTSJ3Q8IY81 847 aaKnown RBP16.47■□□□□ 0.23
RAB5C-206ENST00000550406 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.47■□□□□ 0.23
RAB5C-206ENST00000550406 MEIS3Q99687 375 aa16.47■□□□□ 0.23
RAB5C-206ENST00000550406 PLA2G12BQ9BX93 195 aa16.47■□□□□ 0.23
RAB5C-206ENST00000550406 C9orf78Q9NZ63 289 aaPredicted RBP16.47■□□□□ 0.23
RAB5C-206ENST00000550406 PDE8AO60658 829 aa16.46■□□□□ 0.23
RAB5C-206ENST00000550406 PDE6BP35913 854 aa16.46■□□□□ 0.23
RAB5C-206ENST00000550406 FOXO4P98177 505 aa16.46■□□□□ 0.23
RAB5C-206ENST00000550406 CRY2Q49AN0 593 aa16.46■□□□□ 0.23
RAB5C-206ENST00000550406 C2CD5Q86YS7 1000 aa16.46■□□□□ 0.23
RAB5C-206ENST00000550406 SUCLG2Q96I99 432 aa16.46■□□□□ 0.23
RAB5C-206ENST00000550406 COG6Q9Y2V7 657 aa16.46■□□□□ 0.23
RAB5C-206ENST00000550406 SLX4Q8IY92 1834 aa16.45■□□□□ 0.22
RAB5C-206ENST00000550406 ZBTB7BO15156 539 aaPredicted RBP16.45■□□□□ 0.22
RAB5C-206ENST00000550406 SRGNP10124 158 aa16.45■□□□□ 0.22
RAB5C-206ENST00000550406 MS4A1P11836 297 aa16.45■□□□□ 0.22
RAB5C-206ENST00000550406 SF3B3Q15393 1217 aaKnown RBP16.45■□□□□ 0.22
RAB5C-206ENST00000550406 NLRP3Q96P20 1036 aa16.45■□□□□ 0.22
RAB5C-206ENST00000550406 MVPQ14764 893 aaKnown RBP16.44■□□□□ 0.22
RAB5C-206ENST00000550406 ITPRIPQ8IWB1 547 aa16.44■□□□□ 0.22
RAB5C-206ENST00000550406 TTLL11Q8NHH1 800 aa16.44■□□□□ 0.22
RAB5C-206ENST00000550406 H0YIN7 160 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms