RNA–Protein interactions for RNA: ENST00000548473.1

AC007540.1-201, humanhuman

TSL 3 BASIC

Gene AC007540.1, Length 507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007540.1-201ENST00000548473 C9orf131Q5VYM1 1079 aa15.41■□□□□ 0.06
AC007540.1-201ENST00000548473 PRPF40BQ6NWY9 871 aaKnown RBP15.41■□□□□ 0.06
AC007540.1-201ENST00000548473 STK31Q9BXU1 1019 aa15.41■□□□□ 0.06
AC007540.1-201ENST00000548473 DLEC1Q9Y238 1755 aa15.41■□□□□ 0.06
AC007540.1-201ENST00000548473 MIER1Q8N108 512 aa15.4■□□□□ 0.06
AC007540.1-201ENST00000548473 SYNE4Q8N205 404 aa15.4■□□□□ 0.06
AC007540.1-201ENST00000548473 ISCA1Q9BUE6 129 aa15.4■□□□□ 0.06
AC007540.1-201ENST00000548473 MYH16Q9H6N6 1097 aa15.4■□□□□ 0.06
AC007540.1-201ENST00000548473 TRMT112Q9UI30 125 aaKnown RBP15.4■□□□□ 0.06
AC007540.1-201ENST00000548473 VAMP4O75379 141 aa15.39■□□□□ 0.05
AC007540.1-201ENST00000548473 SLC4A2P04920 1241 aa15.39■□□□□ 0.05
AC007540.1-201ENST00000548473 SLC10A5Q5PT55 438 aa15.39■□□□□ 0.05
AC007540.1-201ENST00000548473 C3orf67Q6ZVT6 689 aa15.39■□□□□ 0.05
AC007540.1-201ENST00000548473 ZNF526Q8TF50 670 aaPredicted RBP15.39■□□□□ 0.05
AC007540.1-201ENST00000548473 RNF181Q9P0P0 153 aa15.39■□□□□ 0.05
AC007540.1-201ENST00000548473 ZNF521Q96K83 1311 aa15.39■□□□□ 0.05
AC007540.1-201ENST00000548473 DDX58O95786 925 aaKnown RBP15.38■□□□□ 0.05
AC007540.1-201ENST00000548473 HCLS1P14317 486 aaPredicted RBP15.38■□□□□ 0.05
AC007540.1-201ENST00000548473 ALDH1B1P30837 517 aa15.38■□□□□ 0.05
AC007540.1-201ENST00000548473 CRY2Q49AN0 593 aa15.38■□□□□ 0.05
AC007540.1-201ENST00000548473 G2E3Q7L622 706 aa15.38■□□□□ 0.05
AC007540.1-201ENST00000548473 RPGRQ92834 1020 aaKnown RBP15.38■□□□□ 0.05
AC007540.1-201ENST00000548473 NLRP3Q96P20 1036 aa15.38■□□□□ 0.05
AC007540.1-201ENST00000548473 MYD88Q99836 296 aa15.38■□□□□ 0.05
AC007540.1-201ENST00000548473 ADCY9O60503 1353 aa15.37■□□□□ 0.05
AC007540.1-201ENST00000548473 NFKBIEO00221 500 aa15.37■□□□□ 0.05
AC007540.1-201ENST00000548473 TRIM28Q13263 835 aaKnown RBP15.37■□□□□ 0.05
AC007540.1-201ENST00000548473 C7orf43Q8WVR3 580 aa15.37■□□□□ 0.05
AC007540.1-201ENST00000548473 SLX4Q8IY92 1834 aa15.37■□□□□ 0.05
AC007540.1-201ENST00000548473 RNF123Q5XPI4 1314 aa15.37■□□□□ 0.05
AC007540.1-201ENST00000548473 SH3TC1Q8TE82 1336 aa15.37■□□□□ 0.05
AC007540.1-201ENST00000548473 TNRC6CQ9HCJ0 1690 aaKnown RBP15.36■□□□□ 0.05
AC007540.1-201ENST00000548473 PRELPP51888 382 aa15.36■□□□□ 0.05
AC007540.1-201ENST00000548473 RTL5Q5HYW3 569 aaPredicted RBP15.36■□□□□ 0.05
AC007540.1-201ENST00000548473 OLFM4Q6UX06 510 aa15.36■□□□□ 0.05
AC007540.1-201ENST00000548473 FAM89AQ96GI7 184 aa15.36■□□□□ 0.05
AC007540.1-201ENST00000548473 RBM17Q96I25 401 aaKnown RBP15.36■□□□□ 0.05
AC007540.1-201ENST00000548473 MAP3K2Q9Y2U5 619 aa15.36■□□□□ 0.05
AC007540.1-201ENST00000548473 RIC1Q4ADV7 1423 aa15.35■□□□□ 0.05
AC007540.1-201ENST00000548473 ANKRD36CQ5JPF3 1778 aa15.35■□□□□ 0.05
AC007540.1-201ENST00000548473 PI4KAP2A4QPH2 592 aa15.35■□□□□ 0.05
AC007540.1-201ENST00000548473 LMNB1P20700 586 aa15.35■□□□□ 0.05
AC007540.1-201ENST00000548473 HOXA10P31260 410 aaPredicted RBP15.35■□□□□ 0.05
AC007540.1-201ENST00000548473 KSR2Q6VAB6 950 aa15.35■□□□□ 0.05
AC007540.1-201ENST00000548473 PI4KAP1Q8N8J0 262 aa15.35■□□□□ 0.05
AC007540.1-201ENST00000548473 METTL22Q9BUU2 404 aaPredicted RBP15.35■□□□□ 0.05
AC007540.1-201ENST00000548473 GPBP1L1Q9HC44 474 aaPredicted RBP15.35■□□□□ 0.05
AC007540.1-201ENST00000548473 CCDC93Q567U6 631 aa15.34■□□□□ 0.05
AC007540.1-201ENST00000548473 SOGA3Q5TF21 947 aa15.34■□□□□ 0.05
AC007540.1-201ENST00000548473 CRAMP1Q96RY5 1269 aa15.34■□□□□ 0.05
AC007540.1-201ENST00000548473 CACNA1SQ13698 1873 aa15.33■□□□□ 0.05
AC007540.1-201ENST00000548473 FLIIQ13045 1269 aa15.33■□□□□ 0.04
AC007540.1-201ENST00000548473 JARID2Q92833 1246 aaPredicted RBP15.33■□□□□ 0.04
AC007540.1-201ENST00000548473 TAOK3Q9H2K8 898 aa15.33■□□□□ 0.04
AC007540.1-201ENST00000548473 ARFGEF2Q9Y6D5 1785 aa15.32■□□□□ 0.04
AC007540.1-201ENST00000548473 E9PSI1 815 aa15.32■□□□□ 0.04
AC007540.1-201ENST00000548473 IRS4O14654 1257 aaPredicted RBP15.32■□□□□ 0.04
AC007540.1-201ENST00000548473 SLFN5Q08AF3 891 aa15.32■□□□□ 0.04
AC007540.1-201ENST00000548473 FKBP5Q13451 457 aaPredicted RBP15.32■□□□□ 0.04
AC007540.1-201ENST00000548473 CCDC191Q8NCU4 936 aa15.32■□□□□ 0.04
AC007540.1-201ENST00000548473 CDCA7LQ96GN5 454 aa15.32■□□□□ 0.04
AC007540.1-201ENST00000548473 CWC25Q9NXE8 425 aaPredicted RBP15.32■□□□□ 0.04
AC007540.1-201ENST00000548473 IGKV5-2P06315 115 aa15.31■□□□□ 0.04
AC007540.1-201ENST00000548473 NEXNQ0ZGT2 675 aa15.31■□□□□ 0.04
AC007540.1-201ENST00000548473 DDX46Q7L014 1031 aaKnown RBP15.31■□□□□ 0.04
AC007540.1-201ENST00000548473 SLC51AQ86UW1 340 aa15.31■□□□□ 0.04
AC007540.1-201ENST00000548473 RTKN2Q8IZC4 609 aa15.31■□□□□ 0.04
AC007540.1-201ENST00000548473 ZBTB38Q8NAP3 1195 aaPredicted RBP15.31■□□□□ 0.04
AC007540.1-201ENST00000548473 SBF1O95248 1867 aa15.31■□□□□ 0.04
AC007540.1-201ENST00000548473 PPEF1O14829 653 aaPredicted RBP15.3■□□□□ 0.04
AC007540.1-201ENST00000548473 ABCC4O15439 1325 aa15.3■□□□□ 0.04
AC007540.1-201ENST00000548473 PCCAP05165 728 aaPredicted RBP15.3■□□□□ 0.04
AC007540.1-201ENST00000548473 FKBP4Q02790 459 aaKnown RBP eCLIP15.3■□□□□ 0.04
AC007540.1-201ENST00000548473 CWF19L2Q2TBE0 894 aaKnown RBP15.3■□□□□ 0.04
AC007540.1-201ENST00000548473 LTBP3Q9NS15 1303 aa15.3■□□□□ 0.04
AC007540.1-201ENST00000548473 DNAAF4Q8WXU2 420 aa15.29■□□□□ 0.04
AC007540.1-201ENST00000548473 ZNF277Q9NRM2 450 aaPredicted RBP15.29■□□□□ 0.04
AC007540.1-201ENST00000548473 FER1L6Q2WGJ9 1857 aa15.29■□□□□ 0.04
AC007540.1-201ENST00000548473 NEURL1BA8MQ27 555 aa15.28■□□□□ 0.04
AC007540.1-201ENST00000548473 BBOX1O75936 387 aa15.28■□□□□ 0.04
AC007540.1-201ENST00000548473 SF3B3Q15393 1217 aaKnown RBP15.28■□□□□ 0.04
AC007540.1-201ENST00000548473 CC2D2BQ6DHV5 1058 aa15.28■□□□□ 0.04
AC007540.1-201ENST00000548473 NMRK2Q9NPI5 230 aa15.28■□□□□ 0.04
AC007540.1-201ENST00000548473 CCDC88AQ3V6T2 1871 aa15.27■□□□□ 0.04
AC007540.1-201ENST00000548473 KDM2BQ8NHM5 1336 aa15.27■□□□□ 0.04
AC007540.1-201ENST00000548473 ZC3H4Q9UPT8 1303 aaKnown RBP15.27■□□□□ 0.04
AC007540.1-201ENST00000548473 F6X3S4 739 aa15.27■□□□□ 0.04
AC007540.1-201ENST00000548473 HSP90B1P14625 803 aaKnown RBP15.27■□□□□ 0.04
AC007540.1-201ENST00000548473 GRAPQ13588 217 aa15.27■□□□□ 0.04
AC007540.1-201ENST00000548473 GRAPLQ8TC17 118 aaPredicted RBP15.27■□□□□ 0.04
AC007540.1-201ENST00000548473 TMX4Q9H1E5 349 aaPredicted RBP15.27■□□□□ 0.04
AC007540.1-201ENST00000548473 ATP6V0A2Q9Y487 856 aa15.27■□□□□ 0.04
AC007540.1-201ENST00000548473 KIF3CO14782 793 aa15.26■□□□□ 0.03
AC007540.1-201ENST00000548473 PDE8AO60658 829 aa15.26■□□□□ 0.03
AC007540.1-201ENST00000548473 C1QTNF8P60827 252 aa15.26■□□□□ 0.03
AC007540.1-201ENST00000548473 TRMT2AQ8IZ69 625 aaKnown RBP15.26■□□□□ 0.03
AC007540.1-201ENST00000548473 CCDC85AQ96PX6 553 aaPredicted RBP15.26■□□□□ 0.03
AC007540.1-201ENST00000548473 PSMD1Q99460 953 aa15.26■□□□□ 0.03
AC007540.1-201ENST00000548473 RRAGCQ9HB90 399 aa15.26■□□□□ 0.03
AC007540.1-201ENST00000548473 LAMB2P55268 1798 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms