RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 MRPL50Q8N5N7 158 aaKnown RBP22.08■■□□□ 1.12
HDAC7-227ENST00000548080 PI4KAP1Q8N8J0 262 aa22.08■■□□□ 1.12
HDAC7-227ENST00000548080 COL11A2P13942 1736 aaPredicted RBP22.07■■□□□ 1.12
HDAC7-227ENST00000548080 TNRC6CQ9HCJ0 1690 aaKnown RBP22.07■■□□□ 1.12
HDAC7-227ENST00000548080 NTSR2O95665 410 aa22.07■■□□□ 1.12
HDAC7-227ENST00000548080 DDX58O95786 925 aaKnown RBP22.07■■□□□ 1.12
HDAC7-227ENST00000548080 GTF2E1P29083 439 aaPredicted RBP22.07■■□□□ 1.12
HDAC7-227ENST00000548080 FKBP5Q13451 457 aaPredicted RBP22.07■■□□□ 1.12
HDAC7-227ENST00000548080 ERFEQ4G0M1 354 aa22.07■■□□□ 1.12
HDAC7-227ENST00000548080 HSP90AB3PQ58FF7 597 aa22.07■■□□□ 1.12
HDAC7-227ENST00000548080 ZKSCAN2Q63HK3 967 aa22.07■■□□□ 1.12
HDAC7-227ENST00000548080 KIF16BQ96L93 1317 aa22.07■■□□□ 1.12
HDAC7-227ENST00000548080 TPTE2Q6XPS3 522 aa22.06■■□□□ 1.12
HDAC7-227ENST00000548080 SYNE4Q8N205 404 aa22.06■■□□□ 1.12
HDAC7-227ENST00000548080 PPP4R2Q9NY27 417 aa22.06■■□□□ 1.12
HDAC7-227ENST00000548080 GOLGB1Q14789 3259 aaKnown RBP22.06■■□□□ 1.12
HDAC7-227ENST00000548080 IPO8O15397 1037 aaKnown RBP22.05■■□□□ 1.12
HDAC7-227ENST00000548080 TGFB2P61812 414 aa22.05■■□□□ 1.12
HDAC7-227ENST00000548080 KSR2Q6VAB6 950 aa22.05■■□□□ 1.12
HDAC7-227ENST00000548080 EXOC6Q8TAG9 804 aa22.05■■□□□ 1.12
HDAC7-227ENST00000548080 CRBNQ96SW2 442 aa22.05■■□□□ 1.12
HDAC7-227ENST00000548080 ISCA1Q9BUE6 129 aa22.05■■□□□ 1.12
HDAC7-227ENST00000548080 NOB1Q9ULX3 412 aaKnown RBP22.05■■□□□ 1.12
HDAC7-227ENST00000548080 F6X3S4 739 aa22.04■■□□□ 1.12
HDAC7-227ENST00000548080 MS4A1P11836 297 aa22.04■■□□□ 1.12
HDAC7-227ENST00000548080 YBX3P16989 372 aaKnown RBP eCLIP22.04■■□□□ 1.12
HDAC7-227ENST00000548080 KCNA3P22001 575 aa22.04■■□□□ 1.12
HDAC7-227ENST00000548080 GPR162Q16538 588 aa22.04■■□□□ 1.12
HDAC7-227ENST00000548080 PARP10Q53GL7 1025 aa22.04■■□□□ 1.12
HDAC7-227ENST00000548080 RTL5Q5HYW3 569 aaPredicted RBP22.04■■□□□ 1.12
HDAC7-227ENST00000548080 C2CD5Q86YS7 1000 aa22.04■■□□□ 1.12
HDAC7-227ENST00000548080 NYXQ9GZU5 481 aa22.04■■□□□ 1.12
HDAC7-227ENST00000548080 BRCA1P38398 1863 aaKnown RBP22.04■■□□□ 1.12
HDAC7-227ENST00000548080 PPP1R42Q7Z4L9 355 aa22.03■■□□□ 1.12
HDAC7-227ENST00000548080 METTL22Q9BUU2 404 aaPredicted RBP22.03■■□□□ 1.12
HDAC7-227ENST00000548080 UTP14AQ9BVJ6 771 aaKnown RBP22.03■■□□□ 1.12
HDAC7-227ENST00000548080 BRIP1Q9BX63 1249 aa22.03■■□□□ 1.12
HDAC7-227ENST00000548080 JARID2Q92833 1246 aaPredicted RBP22.03■■□□□ 1.12
HDAC7-227ENST00000548080 TRMT112Q9UI30 125 aaKnown RBP22.03■■□□□ 1.12
HDAC7-227ENST00000548080 CACNA1SQ13698 1873 aa22.02■■□□□ 1.12
HDAC7-227ENST00000548080 DLEC1Q9Y238 1755 aa22.02■■□□□ 1.12
HDAC7-227ENST00000548080 IBTKQ9P2D0 1353 aaPredicted RBP22.01■■□□□ 1.11
HDAC7-227ENST00000548080 IGKV5-2P06315 115 aa22.01■■□□□ 1.11
HDAC7-227ENST00000548080 CWF19L2Q2TBE0 894 aaKnown RBP22.01■■□□□ 1.11
HDAC7-227ENST00000548080 ATF7IPQ6VMQ6 1270 aa22.01■■□□□ 1.11
HDAC7-227ENST00000548080 C3orf67Q6ZVT6 689 aa22.01■■□□□ 1.11
HDAC7-227ENST00000548080 ARHGAP45Q92619 1136 aa22.01■■□□□ 1.11
HDAC7-227ENST00000548080 H0YIN7 160 aa22■■□□□ 1.11
HDAC7-227ENST00000548080 HCLS1P14317 486 aaPredicted RBP22■■□□□ 1.11
HDAC7-227ENST00000548080 PDE6BP35913 854 aa22■■□□□ 1.11
HDAC7-227ENST00000548080 PANK1Q8TE04 598 aa22■■□□□ 1.11
HDAC7-227ENST00000548080 DNAAF4Q8WXU2 420 aa22■■□□□ 1.11
HDAC7-227ENST00000548080 ZNF622Q969S3 477 aaKnown RBP eCLIP22■■□□□ 1.11
HDAC7-227ENST00000548080 FAM89AQ96GI7 184 aa22■■□□□ 1.11
HDAC7-227ENST00000548080 BCS1LQ9Y276 419 aa22■■□□□ 1.11
HDAC7-227ENST00000548080 DZIP1LQ8IYY4 767 aaKnown RBP21.99■■□□□ 1.11
HDAC7-227ENST00000548080 TNNQ9UQP3 1299 aa21.99■■□□□ 1.11
HDAC7-227ENST00000548080 TRIM27P14373 513 aa21.98■■□□□ 1.11
HDAC7-227ENST00000548080 PIM2Q9P1W9 311 aa21.98■■□□□ 1.11
HDAC7-227ENST00000548080 LAMB2P55268 1798 aa21.98■■□□□ 1.11
HDAC7-227ENST00000548080 UTRNP46939 3433 aa21.97■■□□□ 1.11
HDAC7-227ENST00000548080 NEXNQ0ZGT2 675 aa21.97■■□□□ 1.11
HDAC7-227ENST00000548080 FTSJ3Q8IY81 847 aaKnown RBP21.97■■□□□ 1.11
HDAC7-227ENST00000548080 CLUAP1Q96AJ1 413 aa21.97■■□□□ 1.11
HDAC7-227ENST00000548080 DDX60Q8IY21 1712 aaKnown RBP21.97■■□□□ 1.11
HDAC7-227ENST00000548080 SH3TC1Q8TE82 1336 aa21.97■■□□□ 1.11
HDAC7-227ENST00000548080 DCAF8L1A6NGE4 600 aa21.96■■□□□ 1.11
HDAC7-227ENST00000548080 RLBP1P12271 317 aa21.96■■□□□ 1.11
HDAC7-227ENST00000548080 TRIM28Q13263 835 aaKnown RBP21.96■■□□□ 1.11
HDAC7-227ENST00000548080 SLC4A10Q6U841 1118 aa21.96■■□□□ 1.11
HDAC7-227ENST00000548080 CWC25Q9NXE8 425 aaPredicted RBP21.96■■□□□ 1.11
HDAC7-227ENST00000548080 ZNF219Q9P2Y4 722 aaPredicted RBP21.96■■□□□ 1.11
HDAC7-227ENST00000548080 NEURL1BA8MQ27 555 aa21.96■■□□□ 1.11
HDAC7-227ENST00000548080 SRGNP10124 158 aa21.96■■□□□ 1.11
HDAC7-227ENST00000548080 CCDC191Q8NCU4 936 aa21.96■■□□□ 1.11
HDAC7-227ENST00000548080 API5Q9BZZ5 524 aaKnown RBP21.96■■□□□ 1.11
HDAC7-227ENST00000548080 COG6Q9Y2V7 657 aa21.96■■□□□ 1.11
HDAC7-227ENST00000548080 DALRD3Q5D0E6 543 aaKnown RBP21.95■■□□□ 1.1
HDAC7-227ENST00000548080 SLX4Q8IY92 1834 aa21.94■■□□□ 1.1
HDAC7-227ENST00000548080 KLRG2A4D1S0 409 aaPredicted RBP21.93■■□□□ 1.1
HDAC7-227ENST00000548080 TTLL6Q8N841 843 aa21.93■■□□□ 1.1
HDAC7-227ENST00000548080 MASTLQ96GX5 879 aa21.93■■□□□ 1.1
HDAC7-227ENST00000548080 RIC1Q4ADV7 1423 aa21.93■■□□□ 1.1
HDAC7-227ENST00000548080 PTPRCP08575 1304 aa21.93■■□□□ 1.1
HDAC7-227ENST00000548080 ARFGEF1Q9Y6D6 1849 aa21.92■■□□□ 1.1
HDAC7-227ENST00000548080 IRS4O14654 1257 aaPredicted RBP21.92■■□□□ 1.1
HDAC7-227ENST00000548080 SLC10A5Q5PT55 438 aa21.92■■□□□ 1.1
HDAC7-227ENST00000548080 BEND3Q5T5X7 828 aa21.92■■□□□ 1.1
HDAC7-227ENST00000548080 ZBTB38Q8NAP3 1195 aaPredicted RBP21.92■■□□□ 1.1
HDAC7-227ENST00000548080 TAF1P21675 1872 aa21.91■■□□□ 1.1
HDAC7-227ENST00000548080 PCCAP05165 728 aaPredicted RBP21.91■■□□□ 1.1
HDAC7-227ENST00000548080 NPR1P16066 1061 aa21.91■■□□□ 1.1
HDAC7-227ENST00000548080 MVPQ14764 893 aaKnown RBP21.91■■□□□ 1.1
HDAC7-227ENST00000548080 SLC51AQ86UW1 340 aa21.91■■□□□ 1.1
HDAC7-227ENST00000548080 LINS1Q8NG48 757 aa21.91■■□□□ 1.1
HDAC7-227ENST00000548080 NLRP3Q96P20 1036 aa21.91■■□□□ 1.1
HDAC7-227ENST00000548080 GCKRQ14397 625 aa21.9■■□□□ 1.1
HDAC7-227ENST00000548080 CRY2Q49AN0 593 aa21.9■■□□□ 1.1
HDAC7-227ENST00000548080 STYK1Q6J9G0 422 aa21.9■■□□□ 1.1
HDAC7-227ENST00000548080 B4GALNT3Q6L9W6 998 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms