RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 ANKRD1Q15327 319 aa16.35■□□□□ 0.21
SLC38A1-204ENST00000546893 CYP46A1Q9Y6A2 500 aa16.35■□□□□ 0.21
SLC38A1-204ENST00000546893 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.35■□□□□ 0.21
SLC38A1-204ENST00000546893 IFIT2P09913 472 aaKnown RBP16.35■□□□□ 0.21
SLC38A1-204ENST00000546893 LTV1Q96GA3 475 aaPredicted RBP16.35■□□□□ 0.21
SLC38A1-204ENST00000546893 ZSWIM6Q9HCJ5 1215 aa16.35■□□□□ 0.21
SLC38A1-204ENST00000546893 F13A1P00488 732 aa16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 TPM3P06753 285 aa16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 SLFN14P0C7P3 912 aa16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 EIF2S2P20042 333 aaKnown RBP16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 AK2P54819 239 aa16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 NBPF6Q5VWK0 638 aa16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 ZNF530Q6P9A1 599 aaPredicted RBP16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 ANKLE2Q86XL3 938 aa16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 LINS1Q8NG48 757 aa16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 NBPF4Q96M43 638 aa16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 C9orf78Q9NZ63 289 aaPredicted RBP16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 TULP2O00295 520 aa16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 PDCP20941 246 aa16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 GABPB1Q06547 395 aaPredicted RBP16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 RNF20Q5VTR2 975 aa16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 TICAM2Q86XR7 235 aa16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 ANKRD7Q92527 254 aa16.34■□□□□ 0.21
SLC38A1-204ENST00000546893 CCDC171Q6TFL3 1326 aa16.33■□□□□ 0.21
SLC38A1-204ENST00000546893 RNMTO43148 476 aaKnown RBP16.33■□□□□ 0.2
SLC38A1-204ENST00000546893 ABCC6O95255 1503 aa16.33■□□□□ 0.2
SLC38A1-204ENST00000546893 PDRG1Q9NUG6 133 aa16.33■□□□□ 0.2
SLC38A1-204ENST00000546893 NSFL1CQ9UNZ2 370 aaKnown RBP16.33■□□□□ 0.2
SLC38A1-204ENST00000546893 RFX7Q2KHR2 1363 aa16.32■□□□□ 0.2
SLC38A1-204ENST00000546893 SYT1P21579 422 aa16.32■□□□□ 0.2
SLC38A1-204ENST00000546893 RUFY3Q7L099 469 aa16.32■□□□□ 0.2
SLC38A1-204ENST00000546893 TIGD1Q96MW7 591 aa16.32■□□□□ 0.2
SLC38A1-204ENST00000546893 FEZ1Q99689 392 aa16.32■□□□□ 0.2
SLC38A1-204ENST00000546893 GIGYF1O75420 1035 aaPredicted RBP16.31■□□□□ 0.2
SLC38A1-204ENST00000546893 MST1RQ04912 1400 aa16.31■□□□□ 0.2
SLC38A1-204ENST00000546893 PSME1Q06323 249 aa16.31■□□□□ 0.2
SLC38A1-204ENST00000546893 CWC27Q6UX04 472 aaKnown RBP16.31■□□□□ 0.2
SLC38A1-204ENST00000546893 OGFRQ9NZT2 677 aa16.31■□□□□ 0.2
SLC38A1-204ENST00000546893 HMG20BQ9P0W2 317 aa16.31■□□□□ 0.2
SLC38A1-204ENST00000546893 PTMAP06454 111 aaKnown RBP16.31■□□□□ 0.2
SLC38A1-204ENST00000546893 CASTP20810 708 aaKnown RBP16.31■□□□□ 0.2
SLC38A1-204ENST00000546893 MRC1P22897 1456 aa16.31■□□□□ 0.2
SLC38A1-204ENST00000546893 FOXD4L5Q5VV16 416 aaPredicted RBP16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 NUTM2GQ5VZR2 741 aa16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 C14orf37Q86TY3 774 aa16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 FOXD4L4Q8WXT5 416 aaPredicted RBP16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 PIBF1Q8WXW3 757 aa16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 TRIM34Q9BYJ4 488 aa16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 IL25Q9H293 177 aa16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 LGR6Q9HBX8 967 aa16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 SIPA1L3O60292 1781 aaPredicted RBP16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 CCDC66A2RUB6 948 aa16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 G3BP1Q13283 466 aaKnown RBP eCLIP16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 NECTIN1Q15223 517 aa16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 NOL8Q76FK4 1167 aaKnown RBP16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 DDX21Q9NR30 783 aaKnown RBP eCLIP16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 MAP3K2Q9Y2U5 619 aa16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 ELP1O95163 1332 aa16.3■□□□□ 0.2
SLC38A1-204ENST00000546893 GRM8O00222 908 aa16.29■□□□□ 0.2
SLC38A1-204ENST00000546893 MMP14P50281 582 aa16.29■□□□□ 0.2
SLC38A1-204ENST00000546893 RASEFQ8IZ41 740 aa16.29■□□□□ 0.2
SLC38A1-204ENST00000546893 ZBTB9Q96C00 473 aa16.29■□□□□ 0.2
SLC38A1-204ENST00000546893 COL15A1P39059 1388 aa16.29■□□□□ 0.2
SLC38A1-204ENST00000546893 NOLC1Q14978 699 aaKnown RBP eCLIP16.29■□□□□ 0.2
SLC38A1-204ENST00000546893 TSGA10IPQ3SY00 556 aa16.29■□□□□ 0.2
SLC38A1-204ENST00000546893 ARHGEF25Q86VW2 580 aa16.29■□□□□ 0.2
SLC38A1-204ENST00000546893 USHBP1Q8N6Y0 703 aa16.29■□□□□ 0.2
SLC38A1-204ENST00000546893 MAP4K1Q92918 833 aa16.29■□□□□ 0.2
SLC38A1-204ENST00000546893 KRT32Q14532 448 aa16.28■□□□□ 0.2
SLC38A1-204ENST00000546893 JAKMIP1Q96N16 626 aaKnown RBP16.28■□□□□ 0.2
SLC38A1-204ENST00000546893 LARP1Q6PKG0 1096 aaKnown RBP16.28■□□□□ 0.2
SLC38A1-204ENST00000546893 JCADQ9P266 1359 aa16.27■□□□□ 0.2
SLC38A1-204ENST00000546893 KIF1AQ12756 1690 aa16.27■□□□□ 0.19
SLC38A1-204ENST00000546893 GADD45BO75293 160 aaPredicted RBP16.27■□□□□ 0.19
SLC38A1-204ENST00000546893 GJB2P29033 226 aa16.27■□□□□ 0.19
SLC38A1-204ENST00000546893 NEXNQ0ZGT2 675 aa16.27■□□□□ 0.19
SLC38A1-204ENST00000546893 AACSQ86V21 672 aa16.27■□□□□ 0.19
SLC38A1-204ENST00000546893 C17orf53Q8N3J3 647 aaPredicted RBP16.27■□□□□ 0.19
SLC38A1-204ENST00000546893 MTMR6Q9Y217 621 aa16.27■□□□□ 0.19
SLC38A1-204ENST00000546893 KDM4FA0A1W2PPD8 638 aa16.26■□□□□ 0.19
SLC38A1-204ENST00000546893 MAP4K4O95819 1239 aaPredicted RBP16.26■□□□□ 0.19
SLC38A1-204ENST00000546893 RNF214Q8ND24 703 aa16.26■□□□□ 0.19
SLC38A1-204ENST00000546893 CHMP4CQ96CF2 233 aa16.26■□□□□ 0.19
SLC38A1-204ENST00000546893 USP25Q9UHP3 1055 aa16.26■□□□□ 0.19
SLC38A1-204ENST00000546893 CNPY2Q9Y2B0 182 aa16.26■□□□□ 0.19
SLC38A1-204ENST00000546893 KRT85P78386 507 aa16.25■□□□□ 0.19
SLC38A1-204ENST00000546893 PRPF40BQ6NWY9 871 aaKnown RBP16.25■□□□□ 0.19
SLC38A1-204ENST00000546893 SPG7Q9UQ90 795 aa16.25■□□□□ 0.19
SLC38A1-204ENST00000546893 GOLGA6L6A8MZA4 724 aa16.25■□□□□ 0.19
SLC38A1-204ENST00000546893 CREB3L3Q68CJ9 461 aa16.25■□□□□ 0.19
SLC38A1-204ENST00000546893 SCAND2PQ9GZW5 306 aaPredicted RBP16.25■□□□□ 0.19
SLC38A1-204ENST00000546893 GCP02774 474 aa16.24■□□□□ 0.19
SLC38A1-204ENST00000546893 PSEN1P49768 467 aa16.24■□□□□ 0.19
SLC38A1-204ENST00000546893 TERF2Q15554 542 aa16.24■□□□□ 0.19
SLC38A1-204ENST00000546893 SPTLC3Q9NUV7 552 aa16.24■□□□□ 0.19
SLC38A1-204ENST00000546893 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.24■□□□□ 0.196e-8■□□□□ 9.1
SLC38A1-204ENST00000546893 RBM8AQ9Y5S9 174 aaKnown RBP16.24■□□□□ 0.19
SLC38A1-204ENST00000546893 CTIFO43310 598 aaKnown RBP16.24■□□□□ 0.19
SLC38A1-204ENST00000546893 KDM4AO75164 1064 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms