RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 SNRPA1P09661 255 aaKnown RBP21.43■■□□□ 1.02
DDX55-212ENST00000544738 ALDH1B1P30837 517 aa21.43■■□□□ 1.02
DDX55-212ENST00000544738 EPS15P42566 896 aa21.43■■□□□ 1.02
DDX55-212ENST00000544738 DCTN1Q14203 1278 aa21.43■■□□□ 1.02
DDX55-212ENST00000544738 TAF7Q15545 349 aaPredicted RBP21.43■■□□□ 1.02
DDX55-212ENST00000544738 ADAMTSL1Q8N6G6 1762 aa21.43■■□□□ 1.02
DDX55-212ENST00000544738 MAP2K2P36507 400 aa21.42■■□□□ 1.02
DDX55-212ENST00000544738 CLEC4GQ6UXB4 293 aa21.42■■□□□ 1.02
DDX55-212ENST00000544738 PLEKHF1Q96S99 279 aa21.42■■□□□ 1.02
DDX55-212ENST00000544738 ZNF652Q9Y2D9 606 aa21.42■■□□□ 1.02
DDX55-212ENST00000544738 SCN7AQ01118 1682 aa21.41■■□□□ 1.02
DDX55-212ENST00000544738 NIP7Q9Y221 180 aaKnown RBP eCLIP21.41■■□□□ 1.02
DDX55-212ENST00000544738 USP16Q9Y5T5 823 aa21.41■■□□□ 1.02
DDX55-212ENST00000544738 TLL2Q9Y6L7 1015 aa21.41■■□□□ 1.02
DDX55-212ENST00000544738 GTF2E1P29083 439 aaPredicted RBP21.4■■□□□ 1.02
DDX55-212ENST00000544738 DDX10Q13206 875 aaKnown RBP21.4■■□□□ 1.02
DDX55-212ENST00000544738 PNISRQ8TF01 805 aaKnown RBP21.4■■□□□ 1.02
DDX55-212ENST00000544738 TNRC18O15417 2968 aaPredicted RBP21.4■■□□□ 1.02
DDX55-212ENST00000544738 MAPK8IP3Q9UPT6 1336 aa21.39■■□□□ 1.01
DDX55-212ENST00000544738 DGKZQ13574 1117 aa21.39■■□□□ 1.01
DDX55-212ENST00000544738 NFE2L2Q16236 605 aa21.39■■□□□ 1.01
DDX55-212ENST00000544738 SCNN1DP51172 638 aa21.38■■□□□ 1.01
DDX55-212ENST00000544738 USP50Q70EL3 339 aaPredicted RBP21.38■■□□□ 1.01
DDX55-212ENST00000544738 PSMD1Q99460 953 aa21.38■■□□□ 1.01
DDX55-212ENST00000544738 ARFGEF2Q9Y6D5 1785 aa21.38■■□□□ 1.01
DDX55-212ENST00000544738 CA12O43570 354 aa21.37■■□□□ 1.01
DDX55-212ENST00000544738 LARGE2Q8N3Y3 721 aa21.37■■□□□ 1.01
DDX55-212ENST00000544738 PDE4DIPQ5VU43 2346 aa21.37■■□□□ 1.01
DDX55-212ENST00000544738 PRAMEF22A3QJZ6 481 aa21.36■■□□□ 1.01
DDX55-212ENST00000544738 CELF2O95319 508 aaKnown RBP21.35■■□□□ 1.01
DDX55-212ENST00000544738 MYBBP1AQ9BQG0 1328 aaKnown RBP21.34■■□□□ 1.01
DDX55-212ENST00000544738 CASP8AP2Q9UKL3 1982 aa21.34■■□□□ 1.01
DDX55-212ENST00000544738 SAPCD2Q86UD0 394 aa21.34■■□□□ 1.01
DDX55-212ENST00000544738 MIS18AQ9NYP9 233 aa21.34■■□□□ 1.01
DDX55-212ENST00000544738 DLG5Q8TDM6 1919 aa21.33■■□□□ 1.01
DDX55-212ENST00000544738 TCERG1O14776 1098 aaKnown RBP21.33■■□□□ 1.01
DDX55-212ENST00000544738 CC2D2BQ6DHV5 1058 aa21.33■■□□□ 1.01
DDX55-212ENST00000544738 RGL2O15211 777 aa21.32■■□□□ 1
DDX55-212ENST00000544738 CIAPIN1Q6FI81 312 aa21.32■■□□□ 1
DDX55-212ENST00000544738 ZNF408Q9H9D4 720 aa21.32■■□□□ 1
DDX55-212ENST00000544738 BRPF1P55201 1214 aaPredicted RBP21.31■■□□□ 1
DDX55-212ENST00000544738 HLFQ16534 295 aa21.31■■□□□ 1
DDX55-212ENST00000544738 NIM1KQ8IY84 436 aa21.31■■□□□ 1
DDX55-212ENST00000544738 ADARB2Q9NS39 739 aaKnown RBP21.31■■□□□ 1
DDX55-212ENST00000544738 THSD7BQ9C0I4 1608 aa21.3■■□□□ 1
DDX55-212ENST00000544738 NBPF26B4DH59 902 aa21.3■■□□□ 1
DDX55-212ENST00000544738 NBPF10Q6P3W6 841 aaKnown RBP21.3■■□□□ 1
DDX55-212ENST00000544738 NUTM1Q86Y26 1132 aa21.3■■□□□ 1
DDX55-212ENST00000544738 NBPF15Q8N660 670 aa21.3■■□□□ 1
DDX55-212ENST00000544738 RPGRQ92834 1020 aaKnown RBP21.3■■□□□ 1
DDX55-212ENST00000544738 GLIS2Q9BZE0 524 aaPredicted RBP21.3■■□□□ 1
DDX55-212ENST00000544738 LTBP1Q14766 1721 aa21.29■■□□□ 1
DDX55-212ENST00000544738 COL4A5P29400 1685 aa21.29■■□□□ 1
DDX55-212ENST00000544738 RIPK4P57078 832 aa21.29■■□□□ 1
DDX55-212ENST00000544738 EIF4A1P60842 406 aaKnown RBP21.29■■□□□ 1
DDX55-212ENST00000544738 THUMPD2Q9BTF0 503 aaKnown RBP21.29■■□□□ 1
DDX55-212ENST00000544738 LMOD3Q0VAK6 560 aa21.28■■□□□ 1
DDX55-212ENST00000544738 CRY2Q49AN0 593 aa21.28■■□□□ 1
DDX55-212ENST00000544738 GPRC5DQ9NZD1 345 aa21.28■■□□□ 1
DDX55-212ENST00000544738 BCORQ6W2J9 1755 aa21.28■■□□□ 1
DDX55-212ENST00000544738 PPIP5K2O43314 1243 aa21.27■■□□□ 1
DDX55-212ENST00000544738 SOX10P56693 466 aa21.27■■□□□ 1
DDX55-212ENST00000544738 GRIPAP1Q4V328 841 aa21.27■■□□□ 1
DDX55-212ENST00000544738 SLC51AQ86UW1 340 aa21.27■■□□□ 1
DDX55-212ENST00000544738 NGEFQ8N5V2 710 aa21.27■■□□□ 1
DDX55-212ENST00000544738 HHIPL1Q96JK4 782 aa21.27■■□□□ 1
DDX55-212ENST00000544738 NYXQ9GZU5 481 aa21.27■■□□□ 1
DDX55-212ENST00000544738 KDM3BQ7LBC6 1761 aa21.27■■□□□ 1
DDX55-212ENST00000544738 SNED1Q8TER0 1413 aa21.27■■□□□ 1
DDX55-212ENST00000544738 TRPM7Q96QT4 1865 aa21.26■□□□□ 0.99
DDX55-212ENST00000544738 ZIC5Q96T25 663 aa21.26■□□□□ 0.99
DDX55-212ENST00000544738 BABAM1Q9NWV8 329 aa21.26■□□□□ 0.99
DDX55-212ENST00000544738 TMPOP42166 694 aaKnown RBP21.25■□□□□ 0.99
DDX55-212ENST00000544738 WDR43Q15061 677 aaKnown RBP eCLIP21.25■□□□□ 0.99
DDX55-212ENST00000544738 AOC3Q16853 763 aa21.25■□□□□ 0.99
DDX55-212ENST00000544738 ABCC12Q96J65 1359 aa21.24■□□□□ 0.99
DDX55-212ENST00000544738 LAMB4A4D0S4 1761 aa21.24■□□□□ 0.99
DDX55-212ENST00000544738 PPEF1O14829 653 aaPredicted RBP21.24■□□□□ 0.99
DDX55-212ENST00000544738 HOXA10P31260 410 aaPredicted RBP21.24■□□□□ 0.99
DDX55-212ENST00000544738 GMPSP49915 693 aaPredicted RBP21.24■□□□□ 0.99
DDX55-212ENST00000544738 CXCL9Q07325 125 aa21.24■□□□□ 0.99
DDX55-212ENST00000544738 RBM17Q96I25 401 aaKnown RBP21.24■□□□□ 0.99
DDX55-212ENST00000544738 TMX4Q9H1E5 349 aaPredicted RBP21.24■□□□□ 0.99
DDX55-212ENST00000544738 TSPYL4Q9UJ04 414 aa21.24■□□□□ 0.99
DDX55-212ENST00000544738 NOGQ13253 232 aa21.23■□□□□ 0.99
DDX55-212ENST00000544738 ERVV-1B6SEH8 477 aa21.22■□□□□ 0.99
DDX55-212ENST00000544738 RUNDC1Q96C34 613 aa21.22■□□□□ 0.99
DDX55-212ENST00000544738 PRKRIP1Q9H875 184 aaPredicted RBP21.22■□□□□ 0.99
DDX55-212ENST00000544738 ZNRF3Q9ULT6 936 aa21.22■□□□□ 0.99
DDX55-212ENST00000544738 RRP7AQ9Y3A4 280 aaKnown RBP21.22■□□□□ 0.99
DDX55-212ENST00000544738 ERBB4Q15303 1308 aa21.22■□□□□ 0.99
DDX55-212ENST00000544738 GPTP24298 496 aa21.21■□□□□ 0.99
DDX55-212ENST00000544738 HUNKP57058 714 aa21.21■□□□□ 0.99
DDX55-212ENST00000544738 CDC37L1Q7L3B6 337 aa21.21■□□□□ 0.99
DDX55-212ENST00000544738 CRAMP1Q96RY5 1269 aa21.21■□□□□ 0.99
DDX55-212ENST00000544738 BCL2L13Q9BXK5 485 aa21.21■□□□□ 0.99
DDX55-212ENST00000544738 PGAP2Q9UHJ9 254 aa21.21■□□□□ 0.99
DDX55-212ENST00000544738 HIRAP54198 1017 aaPredicted RBP21.2■□□□□ 0.98
DDX55-212ENST00000544738 USP48Q86UV5 1035 aa21.2■□□□□ 0.98
DDX55-212ENST00000544738 NEUROD2Q15784 382 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms