RNA–Protein interactions for RNA: ENST00000543226.1

AC003002.1-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC003002.1, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003002.1-201ENST00000543226 COL4A5P29400 1685 aa12.46□□□□□ -0.41
AC003002.1-201ENST00000543226 HSPA5P11021 654 aaKnown RBP12.46□□□□□ -0.41
AC003002.1-201ENST00000543226 ALDH1B1P30837 517 aa12.46□□□□□ -0.41
AC003002.1-201ENST00000543226 OLFM4Q6UX06 510 aa12.46□□□□□ -0.41
AC003002.1-201ENST00000543226 TPTE2Q6XPS3 522 aa12.46□□□□□ -0.41
AC003002.1-201ENST00000543226 SYNE4Q8N205 404 aa12.46□□□□□ -0.41
AC003002.1-201ENST00000543226 GPR101Q96P66 508 aaPredicted RBP12.46□□□□□ -0.41
AC003002.1-201ENST00000543226 CA12O43570 354 aa12.45□□□□□ -0.42
AC003002.1-201ENST00000543226 LMOD1P29536 600 aaPredicted RBP12.45□□□□□ -0.42
AC003002.1-201ENST00000543226 MAP2K2P36507 400 aa12.45□□□□□ -0.42
AC003002.1-201ENST00000543226 CYP4F22Q6NT55 531 aa12.45□□□□□ -0.42
AC003002.1-201ENST00000543226 JDP2Q8WYK2 163 aa12.45□□□□□ -0.42
AC003002.1-201ENST00000543226 TLL2Q9Y6L7 1015 aa12.45□□□□□ -0.42
AC003002.1-201ENST00000543226 SCNN1DP51172 638 aa12.44□□□□□ -0.42
AC003002.1-201ENST00000543226 EIF6P56537 245 aaKnown RBP12.44□□□□□ -0.42
AC003002.1-201ENST00000543226 CRY2Q49AN0 593 aa12.44□□□□□ -0.42
AC003002.1-201ENST00000543226 CST9Q5W186 159 aa12.44□□□□□ -0.42
AC003002.1-201ENST00000543226 CC2D2BQ6DHV5 1058 aa12.44□□□□□ -0.42
AC003002.1-201ENST00000543226 NIP7Q9Y221 180 aaKnown RBP eCLIP12.44□□□□□ -0.42
AC003002.1-201ENST00000543226 USP16Q9Y5T5 823 aa12.44□□□□□ -0.42
AC003002.1-201ENST00000543226 CASP8AP2Q9UKL3 1982 aa12.43□□□□□ -0.42
AC003002.1-201ENST00000543226 CLSPNQ9HAW4 1339 aa12.43□□□□□ -0.42
AC003002.1-201ENST00000543226 BTBD11A6QL63 1104 aa12.43□□□□□ -0.42
AC003002.1-201ENST00000543226 GRIPAP1Q4V328 841 aa12.43□□□□□ -0.42
AC003002.1-201ENST00000543226 USP50Q70EL3 339 aaPredicted RBP12.43□□□□□ -0.42
AC003002.1-201ENST00000543226 RIC1Q4ADV7 1423 aa12.43□□□□□ -0.42
AC003002.1-201ENST00000543226 LAMB4A4D0S4 1761 aa12.43□□□□□ -0.42
AC003002.1-201ENST00000543226 SPDYE2BA6NHP3 402 aa12.42□□□□□ -0.42
AC003002.1-201ENST00000543226 KCNQ3O43525 872 aa12.42□□□□□ -0.42
AC003002.1-201ENST00000543226 SPDYE6P0CI01 402 aa12.42□□□□□ -0.42
AC003002.1-201ENST00000543226 SPDYE2Q495Y8 402 aa12.42□□□□□ -0.42
AC003002.1-201ENST00000543226 PAXIP1Q6ZW49 1069 aaPredicted RBP12.42□□□□□ -0.42
AC003002.1-201ENST00000543226 HHIPL1Q96JK4 782 aa12.42□□□□□ -0.42
AC003002.1-201ENST00000543226 GJA3Q9Y6H8 435 aa12.42□□□□□ -0.42
AC003002.1-201ENST00000543226 NUP98P52948 1817 aa12.41□□□□□ -0.42
AC003002.1-201ENST00000543226 C19orf67A6NJJ6 358 aa12.41□□□□□ -0.42
AC003002.1-201ENST00000543226 SNRPA1P09661 255 aaKnown RBP12.41□□□□□ -0.42
AC003002.1-201ENST00000543226 EPS15P42566 896 aa12.41□□□□□ -0.42
AC003002.1-201ENST00000543226 PIP4K2AP48426 406 aaPredicted RBP12.41□□□□□ -0.42
AC003002.1-201ENST00000543226 BRPF1P55201 1214 aaPredicted RBP12.41□□□□□ -0.42
AC003002.1-201ENST00000543226 FMR1Q06787 632 aaKnown RBP eCLIP12.41□□□□□ -0.42
AC003002.1-201ENST00000543226 SAPCD2Q86UD0 394 aa12.41□□□□□ -0.42
AC003002.1-201ENST00000543226 MCOLN1Q9GZU1 580 aa12.41□□□□□ -0.42
AC003002.1-201ENST00000543226 ABCC12Q96J65 1359 aa12.41□□□□□ -0.42
AC003002.1-201ENST00000543226 PRAMEF22A3QJZ6 481 aa12.4□□□□□ -0.42
AC003002.1-201ENST00000543226 TRAF5O00463 557 aa12.4□□□□□ -0.42
AC003002.1-201ENST00000543226 GRM1Q13255 1194 aa12.4□□□□□ -0.42
AC003002.1-201ENST00000543226 TSKSQ9UJT2 592 aa12.4□□□□□ -0.42
AC003002.1-201ENST00000543226 IBTKQ9P2D0 1353 aaPredicted RBP12.4□□□□□ -0.42
AC003002.1-201ENST00000543226 KIF7Q2M1P5 1343 aa12.39□□□□□ -0.43
AC003002.1-201ENST00000543226 NBPF26B4DH59 902 aa12.39□□□□□ -0.43
AC003002.1-201ENST00000543226 AOC2O75106 756 aa12.39□□□□□ -0.43
AC003002.1-201ENST00000543226 GTF2E1P29083 439 aaPredicted RBP12.39□□□□□ -0.43
AC003002.1-201ENST00000543226 HOXA10P31260 410 aaPredicted RBP12.39□□□□□ -0.43
AC003002.1-201ENST00000543226 NBPF10Q6P3W6 841 aaKnown RBP12.39□□□□□ -0.43
AC003002.1-201ENST00000543226 LARGE2Q8N3Y3 721 aa12.39□□□□□ -0.43
AC003002.1-201ENST00000543226 NBPF15Q8N660 670 aa12.39□□□□□ -0.43
AC003002.1-201ENST00000543226 NYXQ9GZU5 481 aa12.39□□□□□ -0.43
AC003002.1-201ENST00000543226 ADARB2Q9NS39 739 aaKnown RBP12.39□□□□□ -0.43
AC003002.1-201ENST00000543226 U2SURPO15042 1029 aaKnown RBP12.38□□□□□ -0.43
AC003002.1-201ENST00000543226 PER1O15534 1290 aaPredicted RBP12.38□□□□□ -0.43
AC003002.1-201ENST00000543226 GABBR2O75899 941 aa12.38□□□□□ -0.43
AC003002.1-201ENST00000543226 HLFQ16534 295 aa12.38□□□□□ -0.43
AC003002.1-201ENST00000543226 GPRC5DQ9NZD1 345 aa12.38□□□□□ -0.43
AC003002.1-201ENST00000543226 NPC1L1Q9UHC9 1359 aa12.38□□□□□ -0.43
AC003002.1-201ENST00000543226 FAM177BA6PVY3 158 aa12.37□□□□□ -0.43
AC003002.1-201ENST00000543226 ZBTB22O15209 634 aa12.37□□□□□ -0.43
AC003002.1-201ENST00000543226 NIM1KQ8IY84 436 aa12.37□□□□□ -0.43
AC003002.1-201ENST00000543226 CFAP44Q96MT7 982 aa12.37□□□□□ -0.43
AC003002.1-201ENST00000543226 VPS33BQ9H267 617 aa12.37□□□□□ -0.43
AC003002.1-201ENST00000543226 CDHR2Q9BYE9 1310 aa12.37□□□□□ -0.43
AC003002.1-201ENST00000543226 ERVV-1B6SEH8 477 aa12.36□□□□□ -0.43
AC003002.1-201ENST00000543226 CELF2O95319 508 aaKnown RBP12.36□□□□□ -0.43
AC003002.1-201ENST00000543226 LHX8Q68G74 356 aa12.36□□□□□ -0.43
AC003002.1-201ENST00000543226 RPGRQ92834 1020 aaKnown RBP12.36□□□□□ -0.43
AC003002.1-201ENST00000543226 PHACTR3Q96KR7 559 aa12.36□□□□□ -0.43
AC003002.1-201ENST00000543226 CRAMP1Q96RY5 1269 aa12.36□□□□□ -0.43
AC003002.1-201ENST00000543226 PGAP2Q9UHJ9 254 aa12.36□□□□□ -0.43
AC003002.1-201ENST00000543226 PPEF1O14829 653 aaPredicted RBP12.35□□□□□ -0.43
AC003002.1-201ENST00000543226 DGKZQ13574 1117 aa12.35□□□□□ -0.43
AC003002.1-201ENST00000543226 CC2D1BQ5T0F9 858 aaKnown RBP12.35□□□□□ -0.43
AC003002.1-201ENST00000543226 NUTM1Q86Y26 1132 aa12.35□□□□□ -0.43
AC003002.1-201ENST00000543226 ZC3H15Q8WU90 426 aaKnown RBP12.35□□□□□ -0.43
AC003002.1-201ENST00000543226 RSPH6AQ9H0K4 717 aa12.35□□□□□ -0.43
AC003002.1-201ENST00000543226 KDM3BQ7LBC6 1761 aa12.34□□□□□ -0.43
AC003002.1-201ENST00000543226 PPIP5K2O43314 1243 aa12.34□□□□□ -0.43
AC003002.1-201ENST00000543226 PRKAR2BP31323 418 aa12.34□□□□□ -0.43
AC003002.1-201ENST00000543226 NOGQ13253 232 aa12.34□□□□□ -0.43
AC003002.1-201ENST00000543226 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
AC003002.1-201ENST00000543226 RTF1Q92541 710 aaKnown RBP12.34□□□□□ -0.43
AC003002.1-201ENST00000543226 RBM17Q96I25 401 aaKnown RBP12.34□□□□□ -0.43
AC003002.1-201ENST00000543226 MAP3K15Q6ZN16 1313 aa12.34□□□□□ -0.43
AC003002.1-201ENST00000543226 CXCL9Q07325 125 aa12.33□□□□□ -0.44
AC003002.1-201ENST00000543226 AOC3Q16853 763 aa12.33□□□□□ -0.44
AC003002.1-201ENST00000543226 CIAPIN1Q6FI81 312 aa12.33□□□□□ -0.44
AC003002.1-201ENST00000543226 MCM10Q7L590 875 aa12.33□□□□□ -0.44
AC003002.1-201ENST00000543226 GLIS2Q9BZE0 524 aaPredicted RBP12.33□□□□□ -0.44
AC003002.1-201ENST00000543226 ZNRF3Q9ULT6 936 aa12.33□□□□□ -0.44
AC003002.1-201ENST00000543226 UBN2Q6ZU65 1347 aa12.33□□□□□ -0.44
AC003002.1-201ENST00000543226 HTATSF1O43719 755 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms