RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 NEXNQ0ZGT2 675 aa34.84■■■■□ 3.17
CCM2-218ENST00000541586 NFIXQ14938 502 aa34.84■■■■□ 3.17
CCM2-218ENST00000541586 NUP98P52948 1817 aa34.82■■■■□ 3.16
CCM2-218ENST00000541586 MMP10P09238 476 aa34.81■■■■□ 3.16
CCM2-218ENST00000541586 TM4SF1P30408 202 aa34.81■■■■□ 3.16
CCM2-218ENST00000541586 BEND3Q5T5X7 828 aa34.81■■■■□ 3.16
CCM2-218ENST00000541586 SRCIN1Q9C0H9 1055 aa34.81■■■■□ 3.16
CCM2-218ENST00000541586 BCORQ6W2J9 1755 aa34.81■■■■□ 3.16
CCM2-218ENST00000541586 CASZ1Q86V15 1759 aa34.81■■■■□ 3.16
CCM2-218ENST00000541586 ZNF34Q8IZ26 560 aa34.81■■■■□ 3.16
CCM2-218ENST00000541586 ATP10DQ9P241 1426 aa34.81■■■■□ 3.16
CCM2-218ENST00000541586 SCN7AQ01118 1682 aa34.8■■■■□ 3.16
CCM2-218ENST00000541586 RGL2O15211 777 aa34.8■■■■□ 3.16
CCM2-218ENST00000541586 CWF19L2Q2TBE0 894 aaKnown RBP34.79■■■■□ 3.16
CCM2-218ENST00000541586 PARP3Q9Y6F1 533 aa34.78■■■■□ 3.16
CCM2-218ENST00000541586 ARFGEF2Q9Y6D5 1785 aa34.78■■■■□ 3.16
CCM2-218ENST00000541586 UBN2Q6ZU65 1347 aa34.78■■■■□ 3.16
CCM2-218ENST00000541586 IGKV5-2P06315 115 aa34.78■■■■□ 3.16
CCM2-218ENST00000541586 SKAP1Q86WV1 359 aa34.78■■■■□ 3.16
CCM2-218ENST00000541586 ISCA1Q9BUE6 129 aa34.77■■■■□ 3.16
CCM2-218ENST00000541586 DDR1Q08345 913 aa34.76■■■■□ 3.16
CCM2-218ENST00000541586 NLRP10Q86W26 655 aa34.76■■■■□ 3.16
CCM2-218ENST00000541586 SIRT2Q8IXJ6 389 aa34.76■■■■□ 3.16
CCM2-218ENST00000541586 NPHP1O15259 732 aa34.75■■■■□ 3.15
CCM2-218ENST00000541586 GNAI3P08754 354 aa34.75■■■■□ 3.15
CCM2-218ENST00000541586 POLD1P28340 1107 aa34.75■■■■□ 3.15
CCM2-218ENST00000541586 SUSD4Q5VX71 490 aa34.75■■■■□ 3.15
CCM2-218ENST00000541586 POLRMTO00411 1230 aaKnown RBP34.75■■■■□ 3.15
CCM2-218ENST00000541586 LINS1Q8NG48 757 aa34.75■■■■□ 3.15
CCM2-218ENST00000541586 USP44Q9H0E7 712 aa34.75■■■■□ 3.15
CCM2-218ENST00000541586 SPON1Q9HCB6 807 aa34.75■■■■□ 3.15
CCM2-218ENST00000541586 SERPINB2P05120 415 aa34.74■■■■□ 3.15
CCM2-218ENST00000541586 NBPF5PQ86XG9 351 aaPredicted RBP34.74■■■■□ 3.15
CCM2-218ENST00000541586 NEURL1BA8MQ27 555 aa34.73■■■■□ 3.15
CCM2-218ENST00000541586 PARP10Q53GL7 1025 aa34.73■■■■□ 3.15
CCM2-218ENST00000541586 RTL5Q5HYW3 569 aaPredicted RBP34.72■■■■□ 3.15
CCM2-218ENST00000541586 PPP1R42Q7Z4L9 355 aa34.72■■■■□ 3.15
CCM2-218ENST00000541586 CWC25Q9NXE8 425 aaPredicted RBP34.72■■■■□ 3.15
CCM2-218ENST00000541586 CARMIL3Q8ND23 1372 aa34.72■■■■□ 3.15
CCM2-218ENST00000541586 GTF2E1P29083 439 aaPredicted RBP34.72■■■■□ 3.15
CCM2-218ENST00000541586 TRIM28Q13263 835 aaKnown RBP34.72■■■■□ 3.15
CCM2-218ENST00000541586 CCDC191Q8NCU4 936 aa34.72■■■■□ 3.15
CCM2-218ENST00000541586 GNAI2P04899 355 aa34.71■■■■□ 3.15
CCM2-218ENST00000541586 CEP85Q6P2H3 762 aa34.71■■■■□ 3.15
CCM2-218ENST00000541586 RPAP2Q8IXW5 612 aaPredicted RBP34.71■■■■□ 3.15
CCM2-218ENST00000541586 CCDC24Q8N4L8 307 aa34.71■■■■□ 3.15
CCM2-218ENST00000541586 ANKRD44Q8N8A2 993 aa34.71■■■■□ 3.15
CCM2-218ENST00000541586 TRMT112Q9UI30 125 aaKnown RBP34.71■■■■□ 3.15
CCM2-218ENST00000541586 ALDH1L1O75891 902 aa34.7■■■■□ 3.15
CCM2-218ENST00000541586 JARID2Q92833 1246 aaPredicted RBP34.7■■■■□ 3.15
CCM2-218ENST00000541586 UTP14AQ9BVJ6 771 aaKnown RBP34.7■■■■□ 3.15
CCM2-218ENST00000541586 TPTE2Q6XPS3 522 aa34.69■■■■□ 3.14
CCM2-218ENST00000541586 NUTM1Q86Y26 1132 aa34.69■■■■□ 3.14
CCM2-218ENST00000541586 SMC5Q8IY18 1101 aa34.69■■■■□ 3.14
CCM2-218ENST00000541586 PTGER2P43116 358 aa34.69■■■■□ 3.14
CCM2-218ENST00000541586 SRCAPQ6ZRS2 3230 aa34.68■■■■□ 3.14
CCM2-218ENST00000541586 UBTFL1P0CB47 393 aaPredicted RBP34.67■■■■□ 3.14
CCM2-218ENST00000541586 GCKRQ14397 625 aa34.67■■■■□ 3.14
CCM2-218ENST00000541586 FAM89AQ96GI7 184 aa34.67■■■■□ 3.14
CCM2-218ENST00000541586 NYXQ9GZU5 481 aa34.67■■■■□ 3.14
CCM2-218ENST00000541586 SYNE4Q8N205 404 aa34.67■■■■□ 3.14
CCM2-218ENST00000541586 CNBD1Q8NA66 436 aa34.67■■■■□ 3.14
CCM2-218ENST00000541586 PDZRN3Q9UPQ7 1066 aa34.67■■■■□ 3.14
CCM2-218ENST00000541586 SGIP1Q9BQI5 828 aa34.66■■■■□ 3.14
CCM2-218ENST00000541586 NTSR2O95665 410 aa34.65■■■■□ 3.14
CCM2-218ENST00000541586 C9orf78Q9NZ63 289 aaPredicted RBP34.65■■■■□ 3.14
CCM2-218ENST00000541586 ANKRD36CQ5JPF3 1778 aa34.65■■■■□ 3.14
CCM2-218ENST00000541586 NBPF7P0C2Y1 421 aaPredicted RBP34.64■■■■□ 3.14
CCM2-218ENST00000541586 ERFEQ4G0M1 354 aa34.64■■■■□ 3.14
CCM2-218ENST00000541586 PRR5LQ6MZQ0 368 aa34.64■■■■□ 3.14
CCM2-218ENST00000541586 LRRFIP2Q9Y608 721 aaKnown RBP34.64■■■■□ 3.14
CCM2-218ENST00000541586 PPP1R1BQ9UD71 204 aaPredicted RBP34.63■■■■□ 3.13
CCM2-218ENST00000541586 ZBTB38Q8NAP3 1195 aaPredicted RBP34.62■■■■□ 3.13
CCM2-218ENST00000541586 GCC1Q96CN9 775 aa34.62■■■■□ 3.13
CCM2-218ENST00000541586 KLHL34Q8N239 644 aa34.61■■■■□ 3.13
CCM2-218ENST00000541586 AFDNP55196 1824 aaKnown RBP34.61■■■■□ 3.13
CCM2-218ENST00000541586 SH3TC1Q8TE82 1336 aa34.61■■■■□ 3.13
CCM2-218ENST00000541586 RGS3P49796 1198 aa34.61■■■■□ 3.13
CCM2-218ENST00000541586 ST5P78524 1137 aa34.61■■■■□ 3.13
CCM2-218ENST00000541586 UBE3BQ7Z3V4 1068 aa34.61■■■■□ 3.13
CCM2-218ENST00000541586 IBTKQ9P2D0 1353 aaPredicted RBP34.6■■■■□ 3.13
CCM2-218ENST00000541586 PCCAP05165 728 aaPredicted RBP34.59■■■■□ 3.13
CCM2-218ENST00000541586 GRM8O00222 908 aa34.58■■■■□ 3.13
CCM2-218ENST00000541586 HCLS1P14317 486 aaPredicted RBP34.58■■■■□ 3.13
CCM2-218ENST00000541586 H7C1W4 665 aa34.57■■■■□ 3.12
CCM2-218ENST00000541586 HMMRO75330 724 aa34.57■■■■□ 3.12
CCM2-218ENST00000541586 DCTPP1Q9H773 170 aa34.57■■■■□ 3.12
CCM2-218ENST00000541586 UTYO14607 1347 aa34.56■■■■□ 3.12
CCM2-218ENST00000541586 IRS4O14654 1257 aaPredicted RBP34.55■■■■□ 3.12
CCM2-218ENST00000541586 ATP8B2P98198 1209 aa34.55■■■■□ 3.12
CCM2-218ENST00000541586 NUCB1Q02818 461 aa34.55■■■■□ 3.12
CCM2-218ENST00000541586 COL24A1Q17RW2 1714 aa34.55■■■■□ 3.12
CCM2-218ENST00000541586 TSHZ2Q9NRE2 1034 aa34.55■■■■□ 3.12
CCM2-218ENST00000541586 ABCC12Q96J65 1359 aa34.53■■■■□ 3.12
CCM2-218ENST00000541586 PNMA6EA0A0J9YXQ4 647 aa34.52■■■■□ 3.12
CCM2-218ENST00000541586 CASP7P55210 303 aa34.51■■■■□ 3.12
CCM2-218ENST00000541586 HDAC5Q9UQL6 1122 aa34.51■■■■□ 3.12
CCM2-218ENST00000541586 ANKRD45Q5TZF3 282 aa34.5■■■■□ 3.11
CCM2-218ENST00000541586 BRIP1Q9BX63 1249 aa34.5■■■■□ 3.11
CCM2-218ENST00000541586 SLC10A5Q5PT55 438 aa34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 265.9 ms