RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 PDE1AP54750 535 aa18.71■□□□□ 0.59
CLPTM1-202ENST00000541297 MYH14Q7Z406 1995 aaKnown RBP18.71■□□□□ 0.59
CLPTM1-202ENST00000541297 RAB11FIP3O75154 756 aa18.71■□□□□ 0.59
CLPTM1-202ENST00000541297 KCNQ4P56696 695 aa18.71■□□□□ 0.59
CLPTM1-202ENST00000541297 HLFQ16534 295 aa18.71■□□□□ 0.59
CLPTM1-202ENST00000541297 SIL1Q9H173 461 aa18.71■□□□□ 0.59
CLPTM1-202ENST00000541297 CASP7P55210 303 aa18.7■□□□□ 0.58
CLPTM1-202ENST00000541297 NUTM1Q86Y26 1132 aa18.7■□□□□ 0.58
CLPTM1-202ENST00000541297 CHMP5Q9NZZ3 219 aa18.7■□□□□ 0.58
CLPTM1-202ENST00000541297 TBC1D2BQ9UPU7 963 aa18.7■□□□□ 0.58
CLPTM1-202ENST00000541297 MAP3K15Q6ZN16 1313 aa18.7■□□□□ 0.58
CLPTM1-202ENST00000541297 TCIRG1Q13488 830 aa18.7■□□□□ 0.58
CLPTM1-202ENST00000541297 KIF1BPQ96EK5 621 aa18.7■□□□□ 0.58
CLPTM1-202ENST00000541297 TRAK2O60296 914 aa18.69■□□□□ 0.58
CLPTM1-202ENST00000541297 MX1P20591 662 aa18.69■□□□□ 0.58
CLPTM1-202ENST00000541297 CRKLP46109 303 aaKnown RBP18.69■□□□□ 0.58
CLPTM1-202ENST00000541297 CCDC191Q8NCU4 936 aa18.69■□□□□ 0.58
CLPTM1-202ENST00000541297 TRPC5Q9UL62 973 aaPredicted RBP18.69■□□□□ 0.58
CLPTM1-202ENST00000541297 NUP98P52948 1817 aa18.69■□□□□ 0.58
CLPTM1-202ENST00000541297 SALL3Q9BXA9 1300 aa18.68■□□□□ 0.58
CLPTM1-202ENST00000541297 H7C1W4 665 aa18.68■□□□□ 0.58
CLPTM1-202ENST00000541297 GPTP24298 496 aa18.68■□□□□ 0.58
CLPTM1-202ENST00000541297 INTS5Q6P9B9 1019 aaKnown RBP18.68■□□□□ 0.58
CLPTM1-202ENST00000541297 ATRNO75882 1429 aa18.68■□□□□ 0.58
CLPTM1-202ENST00000541297 HSP90AB4PQ58FF6 505 aa18.68■□□□□ 0.58
CLPTM1-202ENST00000541297 ISCA1Q9BUE6 129 aa18.68■□□□□ 0.58
CLPTM1-202ENST00000541297 QTRT2Q9H974 415 aaKnown RBP18.68■□□□□ 0.58
CLPTM1-202ENST00000541297 CHMP3Q9Y3E7 222 aa18.68■□□□□ 0.58
CLPTM1-202ENST00000541297 BTAF1O14981 1849 aa18.68■□□□□ 0.58
CLPTM1-202ENST00000541297 IL6STP40189 918 aaPredicted RBP18.67■□□□□ 0.58
CLPTM1-202ENST00000541297 TBC1D9Q6ZT07 1266 aa18.67■□□□□ 0.58
CLPTM1-202ENST00000541297 DZIP3Q86Y13 1208 aaKnown RBP18.67■□□□□ 0.58
CLPTM1-202ENST00000541297 SMARCC1Q92922 1105 aaPredicted RBP18.67■□□□□ 0.58
CLPTM1-202ENST00000541297 CCDC87Q9NVE4 849 aa18.67■□□□□ 0.58
CLPTM1-202ENST00000541297 SDSP20132 328 aa18.67■□□□□ 0.58
CLPTM1-202ENST00000541297 GIGYF2Q6Y7W6 1299 aaKnown RBP18.67■□□□□ 0.58
CLPTM1-202ENST00000541297 LMBR1LQ6UX01 489 aa18.66■□□□□ 0.58
CLPTM1-202ENST00000541297 SEPT12Q8IYM1 358 aa18.66■□□□□ 0.58
CLPTM1-202ENST00000541297 OSBPL3Q9H4L5 887 aa18.66■□□□□ 0.58
CLPTM1-202ENST00000541297 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.66■□□□□ 0.58
CLPTM1-202ENST00000541297 ANKRD36CQ5JPF3 1778 aa18.66■□□□□ 0.58
CLPTM1-202ENST00000541297 G3BP1Q13283 466 aaKnown RBP eCLIP18.65■□□□□ 0.58
CLPTM1-202ENST00000541297 COL5A3P25940 1745 aaPredicted RBP18.65■□□□□ 0.58
CLPTM1-202ENST00000541297 FOXO4P98177 505 aa18.65■□□□□ 0.58
CLPTM1-202ENST00000541297 RABL6Q3YEC7 729 aaPredicted RBP18.65■□□□□ 0.58
CLPTM1-202ENST00000541297 FAM89AQ96GI7 184 aa18.65■□□□□ 0.58
CLPTM1-202ENST00000541297 TUBGCP6Q96RT7 1819 aa18.65■□□□□ 0.58
CLPTM1-202ENST00000541297 CDC45O75419 566 aa18.65■□□□□ 0.58
CLPTM1-202ENST00000541297 SBF2Q86WG5 1849 aa18.64■□□□□ 0.57
CLPTM1-202ENST00000541297 NHSQ6T4R5 1651 aa18.64■□□□□ 0.57
CLPTM1-202ENST00000541297 SASH1O94885 1247 aa18.64■□□□□ 0.57
CLPTM1-202ENST00000541297 EIF5P55010 431 aaKnown RBP18.64■□□□□ 0.57
CLPTM1-202ENST00000541297 SYNE4Q8N205 404 aa18.63■□□□□ 0.57
CLPTM1-202ENST00000541297 LINC00116Q8NCU8 138 aa18.63■□□□□ 0.57
CLPTM1-202ENST00000541297 COL15A1P39059 1388 aa18.63■□□□□ 0.57
CLPTM1-202ENST00000541297 RFX5P48382 616 aaPredicted RBP18.63■□□□□ 0.57
CLPTM1-202ENST00000541297 PTPN12Q05209 780 aaKnown RBP18.63■□□□□ 0.57
CLPTM1-202ENST00000541297 ERC1Q8IUD2 1116 aa18.63■□□□□ 0.57
CLPTM1-202ENST00000541297 HSCBQ8IWL3 235 aa18.63■□□□□ 0.57
CLPTM1-202ENST00000541297 CLASRPQ8N2M8 674 aaKnown RBP18.63■□□□□ 0.57
CLPTM1-202ENST00000541297 CICQ96RK0 1608 aaPredicted RBP18.62■□□□□ 0.57
CLPTM1-202ENST00000541297 ONECUT3O60422 494 aaPredicted RBP18.62■□□□□ 0.57
CLPTM1-202ENST00000541297 CLCN1P35523 988 aa18.62■□□□□ 0.57
CLPTM1-202ENST00000541297 TRIM6-TRIM34B2RNG4 842 aa18.62■□□□□ 0.57
CLPTM1-202ENST00000541297 MRE11P49959 708 aa18.62■□□□□ 0.57
CLPTM1-202ENST00000541297 NLRP10Q86W26 655 aa18.62■□□□□ 0.57
CLPTM1-202ENST00000541297 NAP1L5Q96NT1 182 aaPredicted RBP18.62■□□□□ 0.57
CLPTM1-202ENST00000541297 STAP2Q9UGK3 403 aa18.62■□□□□ 0.57
CLPTM1-202ENST00000541297 RREB1Q92766 1687 aa18.62■□□□□ 0.57
CLPTM1-202ENST00000541297 MAP4K4O95819 1239 aaPredicted RBP18.61■□□□□ 0.57
CLPTM1-202ENST00000541297 TRIM28Q13263 835 aaKnown RBP18.61■□□□□ 0.57
CLPTM1-202ENST00000541297 RILPL2Q969X0 211 aa18.61■□□□□ 0.57
CLPTM1-202ENST00000541297 CCDC85AQ96PX6 553 aaPredicted RBP18.61■□□□□ 0.57
CLPTM1-202ENST00000541297 SMIM5Q71RC9 77 aa18.61■□□□□ 0.57
CLPTM1-202ENST00000541297 AK9Q5TCS8 1911 aa18.61■□□□□ 0.57
CLPTM1-202ENST00000541297 HSP90AB3PQ58FF7 597 aa18.6■□□□□ 0.57
CLPTM1-202ENST00000541297 AACSQ86V21 672 aa18.6■□□□□ 0.57
CLPTM1-202ENST00000541297 COPRSQ9NQ92 184 aa18.6■□□□□ 0.57
CLPTM1-202ENST00000541297 BRWD3Q6RI45 1802 aa18.6■□□□□ 0.57
CLPTM1-202ENST00000541297 ERVV-1B6SEH8 477 aa18.6■□□□□ 0.57
CLPTM1-202ENST00000541297 ZBTB38Q8NAP3 1195 aaPredicted RBP18.6■□□□□ 0.57
CLPTM1-202ENST00000541297 UBN2Q6ZU65 1347 aa18.59■□□□□ 0.57
CLPTM1-202ENST00000541297 FAM177BA6PVY3 158 aa18.59■□□□□ 0.57
CLPTM1-202ENST00000541297 PCCAP05165 728 aaPredicted RBP18.59■□□□□ 0.57
CLPTM1-202ENST00000541297 IFIT2P09913 472 aaKnown RBP18.59■□□□□ 0.57
CLPTM1-202ENST00000541297 CCDC8Q9H0W5 538 aaPredicted RBP18.59■□□□□ 0.57
CLPTM1-202ENST00000541297 GRPEL1Q9HAV7 217 aa18.59■□□□□ 0.57
CLPTM1-202ENST00000541297 ZNF831Q5JPB2 1677 aa18.59■□□□□ 0.57
CLPTM1-202ENST00000541297 DDX11L8A8MPP1 907 aa18.58■□□□□ 0.57
CLPTM1-202ENST00000541297 PI4K2BQ8TCG2 481 aa18.58■□□□□ 0.57
CLPTM1-202ENST00000541297 EAF2Q96CJ1 260 aaPredicted RBP18.58■□□□□ 0.57
CLPTM1-202ENST00000541297 ZNF594Q96JF6 807 aaPredicted RBP18.58■□□□□ 0.57
CLPTM1-202ENST00000541297 TRMT112Q9UI30 125 aaKnown RBP18.58■□□□□ 0.56
CLPTM1-202ENST00000541297 TLR7Q9NYK1 1049 aaKnown RBP18.58■□□□□ 0.56
CLPTM1-202ENST00000541297 CAMTA2O94983 1202 aa18.57■□□□□ 0.56
CLPTM1-202ENST00000541297 MYH3P11055 1940 aa18.57■□□□□ 0.56
CLPTM1-202ENST00000541297 DDIT3P35638 169 aa18.57■□□□□ 0.56
CLPTM1-202ENST00000541297 TFCP2Q12800 502 aa18.57■□□□□ 0.56
CLPTM1-202ENST00000541297 CCNL1Q9UK58 526 aaPredicted RBP18.57■□□□□ 0.56
CLPTM1-202ENST00000541297 AOX1Q06278 1338 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms