RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 NMRK2Q9NPI5 230 aa18.37■□□□□ 0.53
LTBR-209ENST00000541102 SBF1O95248 1867 aa18.37■□□□□ 0.53
LTBR-209ENST00000541102 KIF3CO14782 793 aa18.36■□□□□ 0.53
LTBR-209ENST00000541102 SOGA3Q5TF21 947 aa18.36■□□□□ 0.53
LTBR-209ENST00000541102 NLRP10Q86W26 655 aa18.36■□□□□ 0.53
LTBR-209ENST00000541102 WDR63Q8IWG1 891 aa18.36■□□□□ 0.53
LTBR-209ENST00000541102 PLBD2Q8NHP8 589 aa18.36■□□□□ 0.53
LTBR-209ENST00000541102 TAOK3Q9H2K8 898 aa18.36■□□□□ 0.53
LTBR-209ENST00000541102 IBTKQ9P2D0 1353 aaPredicted RBP18.35■□□□□ 0.53
LTBR-209ENST00000541102 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
LTBR-209ENST00000541102 OLFM4Q6UX06 510 aa18.35■□□□□ 0.53
LTBR-209ENST00000541102 C3orf67Q6ZVT6 689 aa18.35■□□□□ 0.53
LTBR-209ENST00000541102 C7orf43Q8WVR3 580 aa18.35■□□□□ 0.53
LTBR-209ENST00000541102 CACNA1SQ13698 1873 aa18.35■□□□□ 0.53
LTBR-209ENST00000541102 IL16Q14005 1332 aa18.34■□□□□ 0.53
LTBR-209ENST00000541102 KDM2BQ8NHM5 1336 aa18.34■□□□□ 0.53
LTBR-209ENST00000541102 CRY2Q49AN0 593 aa18.34■□□□□ 0.53
LTBR-209ENST00000541102 CCDC93Q567U6 631 aa18.34■□□□□ 0.53
LTBR-209ENST00000541102 SYNE4Q8N205 404 aa18.34■□□□□ 0.53
LTBR-209ENST00000541102 TSPYL6Q8N831 410 aa18.34■□□□□ 0.53
LTBR-209ENST00000541102 CDCA7LQ96GN5 454 aa18.34■□□□□ 0.53
LTBR-209ENST00000541102 NLRP3Q96P20 1036 aa18.34■□□□□ 0.53
LTBR-209ENST00000541102 PHAXQ9H814 394 aaKnown RBP18.34■□□□□ 0.53
LTBR-209ENST00000541102 TRMT112Q9UI30 125 aaKnown RBP18.34■□□□□ 0.53
LTBR-209ENST00000541102 ATP5J2-PTCD1G3V325 749 aa18.33■□□□□ 0.52
LTBR-209ENST00000541102 TCERG1O14776 1098 aaKnown RBP18.33■□□□□ 0.52
LTBR-209ENST00000541102 SLC10A5Q5PT55 438 aa18.33■□□□□ 0.52
LTBR-209ENST00000541102 RBM17Q96I25 401 aaKnown RBP18.33■□□□□ 0.52
LTBR-209ENST00000541102 RRAGCQ9HB90 399 aa18.33■□□□□ 0.52
LTBR-209ENST00000541102 TNRC6CQ9HCJ0 1690 aaKnown RBP18.33■□□□□ 0.52
LTBR-209ENST00000541102 FANCIQ9NVI1 1328 aa18.32■□□□□ 0.52
LTBR-209ENST00000541102 HCLS1P14317 486 aaPredicted RBP18.32■□□□□ 0.52
LTBR-209ENST00000541102 HOXA10P31260 410 aaPredicted RBP18.32■□□□□ 0.52
LTBR-209ENST00000541102 GOLGA2Q08379 1002 aa18.32■□□□□ 0.52
LTBR-209ENST00000541102 CCDC30Q5VVM6 783 aa18.32■□□□□ 0.52
LTBR-209ENST00000541102 RIC3Q7Z5B4 369 aa18.32■□□□□ 0.52
LTBR-209ENST00000541102 CCDC88AQ3V6T2 1871 aa18.32■□□□□ 0.52
LTBR-209ENST00000541102 LTBP3Q9NS15 1303 aa18.31■□□□□ 0.52
LTBR-209ENST00000541102 CHMP4AQ9BY43 222 aa18.31■□□□□ 0.52
LTBR-209ENST00000541102 ZC3H4Q9UPT8 1303 aaKnown RBP18.3■□□□□ 0.52
LTBR-209ENST00000541102 C16orf71Q8IYS4 520 aaPredicted RBP18.3■□□□□ 0.52
LTBR-209ENST00000541102 RTKN2Q8IZC4 609 aa18.3■□□□□ 0.52
LTBR-209ENST00000541102 CRAMP1Q96RY5 1269 aa18.3■□□□□ 0.52
LTBR-209ENST00000541102 ISCA1Q9BUE6 129 aa18.3■□□□□ 0.52
LTBR-209ENST00000541102 FER1L6Q2WGJ9 1857 aa18.3■□□□□ 0.52
LTBR-209ENST00000541102 RNF123Q5XPI4 1314 aa18.29■□□□□ 0.52
LTBR-209ENST00000541102 SH3TC1Q8TE82 1336 aa18.29■□□□□ 0.52
LTBR-209ENST00000541102 GLTPD2A6NH11 291 aa18.29■□□□□ 0.52
LTBR-209ENST00000541102 FKBP4Q02790 459 aaKnown RBP eCLIP18.29■□□□□ 0.52
LTBR-209ENST00000541102 TWISTNBQ3B726 338 aaPredicted RBP18.29■□□□□ 0.52
LTBR-209ENST00000541102 ZNF277Q9NRM2 450 aaPredicted RBP18.29■□□□□ 0.52
LTBR-209ENST00000541102 RIC1Q4ADV7 1423 aa18.29■□□□□ 0.52
LTBR-209ENST00000541102 ARFGEF2Q9Y6D5 1785 aa18.28■□□□□ 0.52
LTBR-209ENST00000541102 TOMM70O94826 608 aa18.28■□□□□ 0.52
LTBR-209ENST00000541102 SLFN5Q08AF3 891 aa18.28■□□□□ 0.52
LTBR-209ENST00000541102 RTL5Q5HYW3 569 aaPredicted RBP18.28■□□□□ 0.52
LTBR-209ENST00000541102 DPY19L2Q6NUT2 758 aa18.28■□□□□ 0.52
LTBR-209ENST00000541102 FAM89AQ96GI7 184 aa18.28■□□□□ 0.52
LTBR-209ENST00000541102 ANKRD36CQ5JPF3 1778 aa18.27■□□□□ 0.52
LTBR-209ENST00000541102 PPEF1O14829 653 aaPredicted RBP18.27■□□□□ 0.52
LTBR-209ENST00000541102 MYD88Q99836 296 aa18.27■□□□□ 0.52
LTBR-209ENST00000541102 STK31Q9BXU1 1019 aa18.27■□□□□ 0.52
LTBR-209ENST00000541102 DDX58O95786 925 aaKnown RBP18.26■□□□□ 0.51
LTBR-209ENST00000541102 EXOSC9Q06265 439 aaKnown RBP18.26■□□□□ 0.51
LTBR-209ENST00000541102 CC2D2BQ6DHV5 1058 aa18.26■□□□□ 0.51
LTBR-209ENST00000541102 SLC51AQ86UW1 340 aa18.26■□□□□ 0.51
LTBR-209ENST00000541102 TMX4Q9H1E5 349 aaPredicted RBP18.26■□□□□ 0.51
LTBR-209ENST00000541102 TRIM28Q13263 835 aaKnown RBP18.25■□□□□ 0.51
LTBR-209ENST00000541102 DDX46Q7L014 1031 aaKnown RBP18.25■□□□□ 0.51
LTBR-209ENST00000541102 TRMT2AQ8IZ69 625 aaKnown RBP18.25■□□□□ 0.51
LTBR-209ENST00000541102 ABCC4O15439 1325 aa18.24■□□□□ 0.51
LTBR-209ENST00000541102 SLC4A2P04920 1241 aa18.24■□□□□ 0.51
LTBR-209ENST00000541102 VEGFAP15692 232 aaPredicted RBP18.24■□□□□ 0.51
LTBR-209ENST00000541102 IARSP41252 1262 aaKnown RBP18.24■□□□□ 0.51
LTBR-209ENST00000541102 MYH16Q9H6N6 1097 aa18.24■□□□□ 0.51
LTBR-209ENST00000541102 MAP3K2Q9Y2U5 619 aa18.24■□□□□ 0.51
LTBR-209ENST00000541102 TIAM2Q8IVF5 1701 aa18.23■□□□□ 0.51
LTBR-209ENST00000541102 E9PSI1 815 aa18.23■□□□□ 0.51
LTBR-209ENST00000541102 IRS4O14654 1257 aaPredicted RBP18.23■□□□□ 0.51
LTBR-209ENST00000541102 DDNO94850 711 aaPredicted RBP18.23■□□□□ 0.51
LTBR-209ENST00000541102 HSPA6P17066 643 aa18.23■□□□□ 0.51
LTBR-209ENST00000541102 G2E3Q7L622 706 aa18.23■□□□□ 0.51
LTBR-209ENST00000541102 JARID2Q92833 1246 aaPredicted RBP18.23■□□□□ 0.51
LTBR-209ENST00000541102 PSMD1Q99460 953 aa18.23■□□□□ 0.51
LTBR-209ENST00000541102 METTL22Q9BUU2 404 aaPredicted RBP18.23■□□□□ 0.51
LTBR-209ENST00000541102 ZBED9Q6R2W3 1325 aa18.23■□□□□ 0.51
LTBR-209ENST00000541102 DICER1Q9UPY3 1922 aaKnown RBP18.22■□□□□ 0.51
LTBR-209ENST00000541102 PI4KAP2A4QPH2 592 aa18.22■□□□□ 0.51
LTBR-209ENST00000541102 BBOX1O75936 387 aa18.22■□□□□ 0.51
LTBR-209ENST00000541102 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
LTBR-209ENST00000541102 PI4KAP1Q8N8J0 262 aa18.22■□□□□ 0.51
LTBR-209ENST00000541102 RBM46Q8TBY0 533 aaKnown RBP18.22■□□□□ 0.51
LTBR-209ENST00000541102 ATP6V0A2Q9Y487 856 aa18.22■□□□□ 0.51
LTBR-209ENST00000541102 VAMP4O75379 141 aa18.21■□□□□ 0.51
LTBR-209ENST00000541102 GRAPQ13588 217 aa18.21■□□□□ 0.51
LTBR-209ENST00000541102 GRIPAP1Q4V328 841 aa18.21■□□□□ 0.51
LTBR-209ENST00000541102 ZBTB38Q8NAP3 1195 aaPredicted RBP18.21■□□□□ 0.51
LTBR-209ENST00000541102 CCDC191Q8NCU4 936 aa18.21■□□□□ 0.51
LTBR-209ENST00000541102 GRAPLQ8TC17 118 aaPredicted RBP18.21■□□□□ 0.51
LTBR-209ENST00000541102 JDP2Q8WYK2 163 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms