RNA–Protein interactions for RNA: ENST00000541013.2

GOLGA3-206, Transcript of golgin A3, humanhuman

TSL 3

Gene GOLGA3, Length 498 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA3-206ENST00000541013 PLBD2Q8NHP8 589 aa20.32■□□□□ 0.84
GOLGA3-206ENST00000541013 C7orf43Q8WVR3 580 aa20.32■□□□□ 0.84
GOLGA3-206ENST00000541013 ZC3H4Q9UPT8 1303 aaKnown RBP20.31■□□□□ 0.84
GOLGA3-206ENST00000541013 NTSR2O95665 410 aa20.31■□□□□ 0.84
GOLGA3-206ENST00000541013 LMNB1P20700 586 aa20.31■□□□□ 0.84
GOLGA3-206ENST00000541013 ST5P78524 1137 aa20.31■□□□□ 0.84
GOLGA3-206ENST00000541013 SLFN5Q08AF3 891 aa20.31■□□□□ 0.84
GOLGA3-206ENST00000541013 TCIRG1Q13488 830 aa20.31■□□□□ 0.84
GOLGA3-206ENST00000541013 TPTE2Q6XPS3 522 aa20.31■□□□□ 0.84
GOLGA3-206ENST00000541013 ZNF622Q969S3 477 aaKnown RBP eCLIP20.31■□□□□ 0.847e-11■■■□□ 15.9
GOLGA3-206ENST00000541013 SLX4Q8IY92 1834 aa20.31■□□□□ 0.84
GOLGA3-206ENST00000541013 FER1L6Q2WGJ9 1857 aa20.3■□□□□ 0.84
GOLGA3-206ENST00000541013 ATP5J2-PTCD1G3V325 749 aa20.3■□□□□ 0.84
GOLGA3-206ENST00000541013 NLRP10Q86W26 655 aa20.3■□□□□ 0.84
GOLGA3-206ENST00000541013 SYNE4Q8N205 404 aa20.3■□□□□ 0.84
GOLGA3-206ENST00000541013 MASTLQ96GX5 879 aa20.3■□□□□ 0.84
GOLGA3-206ENST00000541013 CACNA1SQ13698 1873 aa20.3■□□□□ 0.84
GOLGA3-206ENST00000541013 TOMM70O94826 608 aa20.29■□□□□ 0.84
GOLGA3-206ENST00000541013 SLC4A2P04920 1241 aa20.29■□□□□ 0.84
GOLGA3-206ENST00000541013 CNKSR1Q969H4 720 aa20.29■□□□□ 0.84
GOLGA3-206ENST00000541013 E9PSI1 815 aa20.28■□□□□ 0.84
GOLGA3-206ENST00000541013 C21orf2O43822 256 aa20.28■□□□□ 0.84
GOLGA3-206ENST00000541013 HSPA6P17066 643 aa20.28■□□□□ 0.84
GOLGA3-206ENST00000541013 C3orf67Q6ZVT6 689 aa20.28■□□□□ 0.84
GOLGA3-206ENST00000541013 ISCA1Q9BUE6 129 aa20.28■□□□□ 0.84
GOLGA3-206ENST00000541013 STK31Q9BXU1 1019 aa20.28■□□□□ 0.84
GOLGA3-206ENST00000541013 IBTKQ9P2D0 1353 aaPredicted RBP20.28■□□□□ 0.84
GOLGA3-206ENST00000541013 CCDC88AQ3V6T2 1871 aa20.28■□□□□ 0.84
GOLGA3-206ENST00000541013 LTBP3Q9NS15 1303 aa20.27■□□□□ 0.84
GOLGA3-206ENST00000541013 GTF2E1P29083 439 aaPredicted RBP20.27■□□□□ 0.84
GOLGA3-206ENST00000541013 HSP90AB3PQ58FF7 597 aa20.27■□□□□ 0.84
GOLGA3-206ENST00000541013 RIC3Q7Z5B4 369 aa20.27■□□□□ 0.84
GOLGA3-206ENST00000541013 NYXQ9GZU5 481 aa20.27■□□□□ 0.84
GOLGA3-206ENST00000541013 PARP10Q53GL7 1025 aa20.26■□□□□ 0.83
GOLGA3-206ENST00000541013 PRPF40BQ6NWY9 871 aaKnown RBP20.26■□□□□ 0.83
GOLGA3-206ENST00000541013 TRMT2AQ8IZ69 625 aaKnown RBP20.26■□□□□ 0.83
GOLGA3-206ENST00000541013 UTP14AQ9BVJ6 771 aaKnown RBP20.26■□□□□ 0.83
GOLGA3-206ENST00000541013 PI4KAP2A4QPH2 592 aa20.25■□□□□ 0.83
GOLGA3-206ENST00000541013 NPR1P16066 1061 aa20.25■□□□□ 0.83
GOLGA3-206ENST00000541013 PPP1R42Q7Z4L9 355 aa20.25■□□□□ 0.83
GOLGA3-206ENST00000541013 PI4KAP1Q8N8J0 262 aa20.25■□□□□ 0.83
GOLGA3-206ENST00000541013 MYD88Q99836 296 aa20.25■□□□□ 0.83
GOLGA3-206ENST00000541013 KDM2BQ8NHM5 1336 aa20.25■□□□□ 0.83
GOLGA3-206ENST00000541013 CACNA1FO60840 1977 aa20.25■□□□□ 0.83
GOLGA3-206ENST00000541013 LAMB2P55268 1798 aa20.24■□□□□ 0.83
GOLGA3-206ENST00000541013 DICER1Q9UPY3 1922 aaKnown RBP20.24■□□□□ 0.83
GOLGA3-206ENST00000541013 GLTPD2A6NH11 291 aa20.24■□□□□ 0.83
GOLGA3-206ENST00000541013 HNRNPUQ00839 825 aaKnown RBP eCLIP20.24■□□□□ 0.83
GOLGA3-206ENST00000541013 FLIIQ13045 1269 aa20.24■□□□□ 0.83
GOLGA3-206ENST00000541013 CRY2Q49AN0 593 aa20.24■□□□□ 0.83
GOLGA3-206ENST00000541013 RBM46Q8TBY0 533 aaKnown RBP20.24■□□□□ 0.83
GOLGA3-206ENST00000541013 RRAGCQ9HB90 399 aa20.24■□□□□ 0.83
GOLGA3-206ENST00000541013 MAP3K2Q9Y2U5 619 aa20.24■□□□□ 0.83
GOLGA3-206ENST00000541013 RIC1Q4ADV7 1423 aa20.24■□□□□ 0.83
GOLGA3-206ENST00000541013 HCLS1P14317 486 aaPredicted RBP20.23■□□□□ 0.83
GOLGA3-206ENST00000541013 DDX60Q8IY21 1712 aaKnown RBP20.23■□□□□ 0.83
GOLGA3-206ENST00000541013 CHMP4AQ9BY43 222 aa20.23■□□□□ 0.83
GOLGA3-206ENST00000541013 ZNF219Q9P2Y4 722 aaPredicted RBP20.23■□□□□ 0.83
GOLGA3-206ENST00000541013 TRMT112Q9UI30 125 aaKnown RBP20.23■□□□□ 0.83
GOLGA3-206ENST00000541013 SNED1Q8TER0 1413 aa20.22■□□□□ 0.83
GOLGA3-206ENST00000541013 POTECB2RU33 542 aa20.22■□□□□ 0.83
GOLGA3-206ENST00000541013 RTL5Q5HYW3 569 aaPredicted RBP20.22■□□□□ 0.83
GOLGA3-206ENST00000541013 KSR2Q6VAB6 950 aa20.22■□□□□ 0.83
GOLGA3-206ENST00000541013 SLC51AQ86UW1 340 aa20.22■□□□□ 0.83
GOLGA3-206ENST00000541013 METTL22Q9BUU2 404 aaPredicted RBP20.22■□□□□ 0.83
GOLGA3-206ENST00000541013 DDX58O95786 925 aaKnown RBP20.21■□□□□ 0.83
GOLGA3-206ENST00000541013 IGKV5-2P06315 115 aa20.21■□□□□ 0.83
GOLGA3-206ENST00000541013 SOGA3Q5TF21 947 aa20.21■□□□□ 0.83
GOLGA3-206ENST00000541013 JARID2Q92833 1246 aaPredicted RBP20.21■□□□□ 0.83
GOLGA3-206ENST00000541013 FAM89AQ96GI7 184 aa20.21■□□□□ 0.83
GOLGA3-206ENST00000541013 TIAM2Q8IVF5 1701 aa20.2■□□□□ 0.82
GOLGA3-206ENST00000541013 TRIM28Q13263 835 aaKnown RBP20.2■□□□□ 0.82
GOLGA3-206ENST00000541013 FKBP5Q13451 457 aaPredicted RBP20.2■□□□□ 0.82
GOLGA3-206ENST00000541013 SLC10A5Q5PT55 438 aa20.2■□□□□ 0.82
GOLGA3-206ENST00000541013 OLFM4Q6UX06 510 aa20.2■□□□□ 0.82
GOLGA3-206ENST00000541013 TAOK3Q9H2K8 898 aa20.2■□□□□ 0.82
GOLGA3-206ENST00000541013 HOXA10P31260 410 aaPredicted RBP20.19■□□□□ 0.82
GOLGA3-206ENST00000541013 CWF19L2Q2TBE0 894 aaKnown RBP20.19■□□□□ 0.82
GOLGA3-206ENST00000541013 SH3TC1Q8TE82 1336 aa20.19■□□□□ 0.82
GOLGA3-206ENST00000541013 TAF1P21675 1872 aa20.18■□□□□ 0.82
GOLGA3-206ENST00000541013 F6X3S4 739 aa20.18■□□□□ 0.82
GOLGA3-206ENST00000541013 ALDH1B1P30837 517 aa20.18■□□□□ 0.82
GOLGA3-206ENST00000541013 FSTL1Q12841 308 aa20.18■□□□□ 0.82
GOLGA3-206ENST00000541013 SSH1Q8WYL5 1049 aa20.18■□□□□ 0.82
GOLGA3-206ENST00000541013 BCL2L13Q9BXK5 485 aa20.18■□□□□ 0.82
GOLGA3-206ENST00000541013 COL4A1P02462 1669 aa20.17■□□□□ 0.82
GOLGA3-206ENST00000541013 WDR90Q96KV7 1748 aa20.17■□□□□ 0.82
GOLGA3-206ENST00000541013 CCDC93Q567U6 631 aa20.17■□□□□ 0.82
GOLGA3-206ENST00000541013 MRPL50Q8N5N7 158 aaKnown RBP20.17■□□□□ 0.82
GOLGA3-206ENST00000541013 RNF123Q5XPI4 1314 aa20.17■□□□□ 0.82
GOLGA3-206ENST00000541013 VEGFAP15692 232 aaPredicted RBP20.16■□□□□ 0.82
GOLGA3-206ENST00000541013 FKBP4Q02790 459 aaKnown RBP eCLIP20.16■□□□□ 0.82
GOLGA3-206ENST00000541013 DNAJC5GQ8N7S2 189 aa20.16■□□□□ 0.82
GOLGA3-206ENST00000541013 CCDC191Q8NCU4 936 aa20.16■□□□□ 0.82
GOLGA3-206ENST00000541013 CWC25Q9NXE8 425 aaPredicted RBP20.16■□□□□ 0.82
GOLGA3-206ENST00000541013 DNAAF4Q8WXU2 420 aa20.15■□□□□ 0.82
GOLGA3-206ENST00000541013 NLRP3Q96P20 1036 aa20.15■□□□□ 0.82
GOLGA3-206ENST00000541013 NEURL1BA8MQ27 555 aa20.14■□□□□ 0.81
GOLGA3-206ENST00000541013 APLP1P51693 650 aa20.14■□□□□ 0.81
GOLGA3-206ENST00000541013 RTKN2Q8IZC4 609 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms