RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 USP25Q9UHP3 1055 aa15.91■□□□□ 0.14
PRICKLE3-205ENST00000540849 LINS1Q8NG48 757 aa15.9■□□□□ 0.14
PRICKLE3-205ENST00000540849 GCP02774 474 aa15.9■□□□□ 0.14
PRICKLE3-205ENST00000540849 COL9A3Q14050 684 aaPredicted RBP15.9■□□□□ 0.14
PRICKLE3-205ENST00000540849 NECAB1Q8N987 351 aa15.9■□□□□ 0.14
PRICKLE3-205ENST00000540849 FUCA2Q9BTY2 467 aa15.9■□□□□ 0.14
PRICKLE3-205ENST00000540849 CCDC8Q9H0W5 538 aaPredicted RBP15.9■□□□□ 0.14
PRICKLE3-205ENST00000540849 MRC1P22897 1456 aa15.89■□□□□ 0.13
PRICKLE3-205ENST00000540849 TPCN1Q9ULQ1 816 aa15.89■□□□□ 0.13
PRICKLE3-205ENST00000540849 LMTK3Q96Q04 1460 aa15.89■□□□□ 0.13
PRICKLE3-205ENST00000540849 UQCRHLA0A096LP55 91 aa15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 SLC27A2O14975 620 aa15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 UQCRHP07919 91 aa15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 AIMP1Q12904 312 aaKnown RBP15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 MAP4K1Q92918 833 aa15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 SNRKQ9NRH2 765 aa15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 A0A0D9SFI3 127 aa15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 VPS37CA5D8V6 355 aaPredicted RBP15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 HIP1O00291 1037 aa15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 NPHP4O75161 1426 aaPredicted RBP15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 DDX58O95786 925 aaKnown RBP15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 ZKSCAN1P17029 563 aaPredicted RBP15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 KIAA2012Q0VF49 1180 aa15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 G3BP1Q13283 466 aaKnown RBP eCLIP15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 PDIA6Q15084 440 aa15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 ANKLE2Q86XL3 938 aa15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 MPNDQ8N594 471 aa15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 DDX21Q9NR30 783 aaKnown RBP eCLIP15.88■□□□□ 0.13
PRICKLE3-205ENST00000540849 TRPM3Q9HCF6 1732 aaPredicted RBP15.87■□□□□ 0.13
PRICKLE3-205ENST00000540849 KDM4FA0A1W2PPD8 638 aa15.87■□□□□ 0.13
PRICKLE3-205ENST00000540849 ADCY5O95622 1261 aa15.87■□□□□ 0.13
PRICKLE3-205ENST00000540849 IGKV5-2P06315 115 aa15.87■□□□□ 0.13
PRICKLE3-205ENST00000540849 GIMAP6Q6P9H5 292 aa15.87■□□□□ 0.13
PRICKLE3-205ENST00000540849 RGPD5Q99666 1765 aa15.87■□□□□ 0.13
PRICKLE3-205ENST00000540849 MED23Q9ULK4 1368 aa15.87■□□□□ 0.13
PRICKLE3-205ENST00000540849 KCNJ4P48050 445 aa15.87■□□□□ 0.13
PRICKLE3-205ENST00000540849 RBM10P98175 930 aaKnown RBP15.87■□□□□ 0.13
PRICKLE3-205ENST00000540849 SIL1Q9H173 461 aa15.87■□□□□ 0.13
PRICKLE3-205ENST00000540849 ZNF142P52746 1687 aaPredicted RBP15.86■□□□□ 0.13
PRICKLE3-205ENST00000540849 GLIPR1L2Q4G1C9 344 aa15.86■□□□□ 0.13
PRICKLE3-205ENST00000540849 ORAI2Q96SN7 254 aa15.86■□□□□ 0.13
PRICKLE3-205ENST00000540849 BOLA2Q9H3K6 86 aa15.86■□□□□ 0.13
PRICKLE3-205ENST00000540849 AXIN2Q9Y2T1 843 aa15.86■□□□□ 0.13
PRICKLE3-205ENST00000540849 SASS6Q6UVJ0 657 aa15.86■□□□□ 0.13
PRICKLE3-205ENST00000540849 KLHL34Q8N239 644 aa15.86■□□□□ 0.13
PRICKLE3-205ENST00000540849 KLHDC4Q8TBB5 520 aa15.86■□□□□ 0.13
PRICKLE3-205ENST00000540849 ZNF830Q96NB3 372 aaPredicted RBP15.86■□□□□ 0.13
PRICKLE3-205ENST00000540849 FSD1Q9BTV5 496 aa15.86■□□□□ 0.13
PRICKLE3-205ENST00000540849 PDCL3Q9H2J4 239 aa15.86■□□□□ 0.13
PRICKLE3-205ENST00000540849 TAF6LQ9Y6J9 622 aa15.86■□□□□ 0.13
PRICKLE3-205ENST00000540849 JCADQ9P266 1359 aa15.85■□□□□ 0.13
PRICKLE3-205ENST00000540849 CDC37L1Q7L3B6 337 aa15.85■□□□□ 0.13
PRICKLE3-205ENST00000540849 TCEANC2Q96MN5 208 aa15.84■□□□□ 0.13
PRICKLE3-205ENST00000540849 SCN11AQ9UI33 1791 aa15.84■□□□□ 0.13
PRICKLE3-205ENST00000540849 KDM4AO75164 1064 aa15.84■□□□□ 0.13
PRICKLE3-205ENST00000540849 PSMA5P28066 241 aa15.84■□□□□ 0.13
PRICKLE3-205ENST00000540849 EPHA10Q5JZY3 1008 aa15.84■□□□□ 0.13
PRICKLE3-205ENST00000540849 NEURL1BA8MQ27 555 aa15.83■□□□□ 0.13
PRICKLE3-205ENST00000540849 PDIA4P13667 645 aaKnown RBP15.83■□□□□ 0.13
PRICKLE3-205ENST00000540849 SLC39A6Q13433 755 aa15.83■□□□□ 0.13
PRICKLE3-205ENST00000540849 LARP1BQ659C4 914 aaKnown RBP15.83■□□□□ 0.13
PRICKLE3-205ENST00000540849 LMOD2Q6P5Q4 547 aa15.83■□□□□ 0.13
PRICKLE3-205ENST00000540849 RIC3Q7Z5B4 369 aa15.83■□□□□ 0.13
PRICKLE3-205ENST00000540849 TTC6Q86TZ1 520 aa15.83■□□□□ 0.13
PRICKLE3-205ENST00000540849 ZNF589Q86UQ0 364 aaPredicted RBP15.83■□□□□ 0.13
PRICKLE3-205ENST00000540849 TTC12Q9H892 705 aaPredicted RBP15.83■□□□□ 0.13
PRICKLE3-205ENST00000540849 KDM6AO15550 1401 aaPredicted RBP15.83■□□□□ 0.13
PRICKLE3-205ENST00000540849 AP5Z1O43299 807 aa15.83■□□□□ 0.12
PRICKLE3-205ENST00000540849 RPS6KB1P23443 525 aa15.83■□□□□ 0.12
PRICKLE3-205ENST00000540849 TOB2Q14106 344 aaPredicted RBP15.83■□□□□ 0.12
PRICKLE3-205ENST00000540849 BLOC1S2Q6QNY1 142 aa15.83■□□□□ 0.12
PRICKLE3-205ENST00000540849 PIBF1Q8WXW3 757 aa15.83■□□□□ 0.12
PRICKLE3-205ENST00000540849 MYL6BP14649 208 aa15.82■□□□□ 0.12
PRICKLE3-205ENST00000540849 FERMT3Q86UX7 667 aa15.82■□□□□ 0.12
PRICKLE3-205ENST00000540849 EDC3Q96F86 508 aaKnown RBP15.82■□□□□ 0.12
PRICKLE3-205ENST00000540849 RNF20Q5VTR2 975 aa15.82■□□□□ 0.12
PRICKLE3-205ENST00000540849 FAM173BQ6P4H8 233 aa15.82■□□□□ 0.12
PRICKLE3-205ENST00000540849 LARP1Q6PKG0 1096 aaKnown RBP15.82■□□□□ 0.12
PRICKLE3-205ENST00000540849 XAGE3Q8WTP9 111 aa15.82■□□□□ 0.12
PRICKLE3-205ENST00000540849 FAM13BQ9NYF5 915 aa15.82■□□□□ 0.12
PRICKLE3-205ENST00000540849 DYNC1I1O14576 645 aa15.81■□□□□ 0.12
PRICKLE3-205ENST00000540849 KRT85P78386 507 aa15.81■□□□□ 0.12
PRICKLE3-205ENST00000540849 GCKRQ14397 625 aa15.81■□□□□ 0.12
PRICKLE3-205ENST00000540849 ZNF790Q6PG37 636 aa15.81■□□□□ 0.12
PRICKLE3-205ENST00000540849 C17orf53Q8N3J3 647 aaPredicted RBP15.81■□□□□ 0.12
PRICKLE3-205ENST00000540849 MYD88Q99836 296 aa15.81■□□□□ 0.12
PRICKLE3-205ENST00000540849 ALDH8A1Q9H2A2 487 aaPredicted RBP15.81■□□□□ 0.12
PRICKLE3-205ENST00000540849 COL15A1P39059 1388 aa15.81■□□□□ 0.12
PRICKLE3-205ENST00000540849 NEXNQ0ZGT2 675 aa15.8■□□□□ 0.12
PRICKLE3-205ENST00000540849 ANKRD1Q15327 319 aa15.8■□□□□ 0.12
PRICKLE3-205ENST00000540849 AFDNP55196 1824 aaKnown RBP15.8■□□□□ 0.12
PRICKLE3-205ENST00000540849 LIG1P18858 919 aa15.8■□□□□ 0.12
PRICKLE3-205ENST00000540849 AEBP2Q6ZN18 517 aaPredicted RBP15.8■□□□□ 0.12
PRICKLE3-205ENST00000540849 METTL22Q9BUU2 404 aaPredicted RBP15.8■□□□□ 0.12
PRICKLE3-205ENST00000540849 ELP1O95163 1332 aa15.8■□□□□ 0.12
PRICKLE3-205ENST00000540849 ERBB3P21860 1342 aa15.8■□□□□ 0.12
PRICKLE3-205ENST00000540849 TAF5LO75529 589 aa15.79■□□□□ 0.12
PRICKLE3-205ENST00000540849 PDCP20941 246 aa15.79■□□□□ 0.12
PRICKLE3-205ENST00000540849 NOLC1Q14978 699 aaKnown RBP eCLIP15.79■□□□□ 0.12
PRICKLE3-205ENST00000540849 COPS6Q7L5N1 327 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms