RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 TLR7Q9NYK1 1049 aaKnown RBP16.54■□□□□ 0.24
SCNN1A-215ENST00000540037 PXDNLA1KZ92 1463 aa16.53■□□□□ 0.24
SCNN1A-215ENST00000540037 TTC41PQ6P2S7 1318 aa16.53■□□□□ 0.24
SCNN1A-215ENST00000540037 A0A0D9SFI3 127 aa16.53■□□□□ 0.24
SCNN1A-215ENST00000540037 SLC27A2O14975 620 aa16.53■□□□□ 0.24
SCNN1A-215ENST00000540037 IFIT2P09913 472 aaKnown RBP16.53■□□□□ 0.24
SCNN1A-215ENST00000540037 ZKSCAN1P17029 563 aaPredicted RBP16.53■□□□□ 0.24
SCNN1A-215ENST00000540037 LTKP29376 864 aa16.53■□□□□ 0.24
SCNN1A-215ENST00000540037 FAM69CQ0P6D2 419 aa16.53■□□□□ 0.24
SCNN1A-215ENST00000540037 CWF19L2Q2TBE0 894 aaKnown RBP16.53■□□□□ 0.24
SCNN1A-215ENST00000540037 CACTINQ8WUQ7 758 aaKnown RBP16.53■□□□□ 0.24
SCNN1A-215ENST00000540037 LRRC37A3O60309 1634 aa16.53■□□□□ 0.24
SCNN1A-215ENST00000540037 GOLGA6L4A6NEF3 574 aa16.53■□□□□ 0.24
SCNN1A-215ENST00000540037 PGBD1Q96JS3 809 aa16.53■□□□□ 0.24
SCNN1A-215ENST00000540037 TM6SF1Q9BZW5 370 aa16.53■□□□□ 0.24
SCNN1A-215ENST00000540037 TTC21AQ8NDW8 1320 aa16.52■□□□□ 0.24
SCNN1A-215ENST00000540037 TPM3P06753 285 aa16.52■□□□□ 0.24
SCNN1A-215ENST00000540037 TNNT1P13805 278 aa16.52■□□□□ 0.24
SCNN1A-215ENST00000540037 ZNF75DP51815 510 aa16.52■□□□□ 0.24
SCNN1A-215ENST00000540037 ZNF592Q92610 1267 aa16.52■□□□□ 0.24
SCNN1A-215ENST00000540037 USP42Q9H9J4 1324 aaKnown RBP16.52■□□□□ 0.24
SCNN1A-215ENST00000540037 JAK2O60674 1132 aa16.52■□□□□ 0.23
SCNN1A-215ENST00000540037 EIF4A1P60842 406 aaKnown RBP16.52■□□□□ 0.23
SCNN1A-215ENST00000540037 LEO1Q8WVC0 666 aaPredicted RBP16.52■□□□□ 0.23
SCNN1A-215ENST00000540037 CEBPZQ03701 1054 aaKnown RBP16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 KCNB2Q92953 911 aa16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 EDC3Q96F86 508 aaKnown RBP16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 TOPAZ1Q8N9V7 1692 aa16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 ADCY9O60503 1353 aa16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 ADAMTS13Q76LX8 1427 aa16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 USP27XA6NNY8 438 aa16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 CHGBP05060 677 aa16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 TOB2Q14106 344 aaPredicted RBP16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 PROSER3Q2NL68 480 aa16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 PLA2G4DQ86XP0 818 aa16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 MAP4K1Q92918 833 aa16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 GTPBP4Q9BZE4 634 aaKnown RBP16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 BOLA2Q9H3K6 86 aa16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 ZNF165P49910 485 aa16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 ZNF589Q86UQ0 364 aaPredicted RBP16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 SIL1Q9H173 461 aa16.51■□□□□ 0.23
SCNN1A-215ENST00000540037 PRAMEF22A3QJZ6 481 aa16.5■□□□□ 0.23
SCNN1A-215ENST00000540037 FOSBP53539 338 aa16.5■□□□□ 0.23
SCNN1A-215ENST00000540037 KLHDC4Q8TBB5 520 aa16.5■□□□□ 0.23
SCNN1A-215ENST00000540037 BICD2Q8TD16 824 aa16.5■□□□□ 0.23
SCNN1A-215ENST00000540037 EAF2Q96CJ1 260 aaPredicted RBP16.5■□□□□ 0.23
SCNN1A-215ENST00000540037 CLIP2Q9UDT6 1046 aa16.5■□□□□ 0.23
SCNN1A-215ENST00000540037 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.5■□□□□ 0.23
SCNN1A-215ENST00000540037 V9GYY5 206 aaPredicted RBP16.5■□□□□ 0.23
SCNN1A-215ENST00000540037 CACNA1FO60840 1977 aa16.5■□□□□ 0.23
SCNN1A-215ENST00000540037 CRYBG1Q9Y4K1 1723 aa16.5■□□□□ 0.23
SCNN1A-215ENST00000540037 C9orf78Q9NZ63 289 aaPredicted RBP16.5■□□□□ 0.23
SCNN1A-215ENST00000540037 A0A0U1RQG5 324 aaPredicted RBP16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 PPFIA3O75145 1194 aa16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 HSP90AB4PQ58FF6 505 aa16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 EVI5LQ96CN4 794 aa16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 N4BP2Q86UW6 1770 aaPredicted RBP16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 ELP1O95163 1332 aa16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 TSPOAP1O95153 1857 aa16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 SASH1O94885 1247 aa16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 TPD52L1Q16890 204 aaPredicted RBP16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 CYB5RLQ6IPT4 315 aa16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 BLOC1S2Q6QNY1 142 aa16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 FTOQ9C0B1 505 aaKnown RBP eCLIP16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 CLSTN2Q9H4D0 955 aa16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 MAP3K2Q9Y2U5 619 aa16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 NDUFB9Q9Y6M9 179 aa16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 NWD1Q149M9 1564 aa16.49■□□□□ 0.23
SCNN1A-215ENST00000540037 ESF1Q9H501 851 aaKnown RBP16.48■□□□□ 0.23
SCNN1A-215ENST00000540037 PTPRUQ92729 1446 aa16.48■□□□□ 0.23
SCNN1A-215ENST00000540037 C14orf37Q86TY3 774 aa16.48■□□□□ 0.23
SCNN1A-215ENST00000540037 CTNNA3Q9UI47 895 aa16.48■□□□□ 0.23
SCNN1A-215ENST00000540037 PPP6R1Q9UPN7 881 aa16.48■□□□□ 0.23
SCNN1A-215ENST00000540037 TMEM2Q9UHN6 1383 aa16.48■□□□□ 0.23
SCNN1A-215ENST00000540037 RGPD8O14715 1765 aaPredicted RBP16.48■□□□□ 0.23
SCNN1A-215ENST00000540037 ERCC4Q92889 916 aaPredicted RBP16.48■□□□□ 0.23
SCNN1A-215ENST00000540037 SETD1BQ9UPS6 1966 aaKnown RBP16.47■□□□□ 0.23
SCNN1A-215ENST00000540037 RPS6KB1P23443 525 aa16.47■□□□□ 0.23
SCNN1A-215ENST00000540037 HDGFP51858 240 aaKnown RBP16.47■□□□□ 0.23
SCNN1A-215ENST00000540037 C11orf57Q6ZUT1 292 aaPredicted RBP16.47■□□□□ 0.23
SCNN1A-215ENST00000540037 TDRD7Q8NHU6 1098 aaKnown RBP16.47■□□□□ 0.23
SCNN1A-215ENST00000540037 SCAND2PQ9GZW5 306 aaPredicted RBP16.47■□□□□ 0.23
SCNN1A-215ENST00000540037 NPHP3Q7Z494 1330 aa16.47■□□□□ 0.23
SCNN1A-215ENST00000540037 NPHP4O75161 1426 aaPredicted RBP16.47■□□□□ 0.23
SCNN1A-215ENST00000540037 SMTNL1A8MU46 457 aa16.47■□□□□ 0.23
SCNN1A-215ENST00000540037 FBXW7Q969H0 707 aa16.47■□□□□ 0.23
SCNN1A-215ENST00000540037 FSD1Q9BTV5 496 aa16.47■□□□□ 0.23
SCNN1A-215ENST00000540037 LRRC2Q9BYS8 371 aa16.47■□□□□ 0.23
SCNN1A-215ENST00000540037 MPRIPQ6WCQ1 1025 aa16.46■□□□□ 0.23
SCNN1A-215ENST00000540037 AMOTL2Q9Y2J4 779 aa16.46■□□□□ 0.23
SCNN1A-215ENST00000540037 RBM43Q6ZSC3 357 aaKnown RBP16.46■□□□□ 0.23
SCNN1A-215ENST00000540037 KAZALD1Q96I82 304 aa16.46■□□□□ 0.23
SCNN1A-215ENST00000540037 PIK3C2AO00443 1686 aa16.46■□□□□ 0.22
SCNN1A-215ENST00000540037 CCDC112Q8NEF3 446 aa16.45■□□□□ 0.22
SCNN1A-215ENST00000540037 BRF1Q92994 677 aa16.45■□□□□ 0.22
SCNN1A-215ENST00000540037 GPATCH3Q96I76 525 aa16.45■□□□□ 0.22
SCNN1A-215ENST00000540037 DDX19AQ9NUU7 478 aaKnown RBP16.45■□□□□ 0.22
SCNN1A-215ENST00000540037 PDCP20941 246 aa16.45■□□□□ 0.22
SCNN1A-215ENST00000540037 ABTB2Q8N961 1025 aa16.45■□□□□ 0.22
SCNN1A-215ENST00000540037 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms