RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 MAP2K5Q13163 448 aa8.43□□□□□ -1.06
SNHG1-212ENST00000539975 TAF7Q15545 349 aaPredicted RBP8.43□□□□□ -1.06
SNHG1-212ENST00000539975 MCM10Q7L590 875 aa8.43□□□□□ -1.06
SNHG1-212ENST00000539975 SAMD7Q7Z3H4 446 aa8.43□□□□□ -1.06
SNHG1-212ENST00000539975 DEFB132Q7Z7B7 95 aa8.43□□□□□ -1.06
SNHG1-212ENST00000539975 PXYLP1Q8TE99 480 aa8.43□□□□□ -1.06
SNHG1-212ENST00000539975 CCNL1Q9UK58 526 aaPredicted RBP8.43□□□□□ -1.06
SNHG1-212ENST00000539975 RRP7AQ9Y3A4 280 aaKnown RBP8.43□□□□□ -1.06
SNHG1-212ENST00000539975 LAS1LQ9Y4W2 734 aaKnown RBP8.43□□□□□ -1.06
SNHG1-212ENST00000539975 PTCD1O75127 700 aaKnown RBP8.42□□□□□ -1.06
SNHG1-212ENST00000539975 PTPN5P54829 565 aa8.42□□□□□ -1.06
SNHG1-212ENST00000539975 EZH2Q15910 746 aaKnown RBP8.42□□□□□ -1.06
SNHG1-212ENST00000539975 TXNRD1Q16881 649 aa8.42□□□□□ -1.06
SNHG1-212ENST00000539975 IL17REQ8NFR9 667 aa8.42□□□□□ -1.06
SNHG1-212ENST00000539975 TEX13AQ9BXU3 409 aaPredicted RBP8.42□□□□□ -1.06
SNHG1-212ENST00000539975 TSR3Q9UJK0 312 aaKnown RBP8.42□□□□□ -1.06
SNHG1-212ENST00000539975 RGPD1P0DJD0 1748 aa8.42□□□□□ -1.06
SNHG1-212ENST00000539975 RGPD2P0DJD1 1756 aa8.41□□□□□ -1.06
SNHG1-212ENST00000539975 PALLDQ8WX93 1383 aa8.41□□□□□ -1.06
SNHG1-212ENST00000539975 ATP6V1AP38606 617 aa8.41□□□□□ -1.06
SNHG1-212ENST00000539975 BCAMP50895 628 aa8.41□□□□□ -1.06
SNHG1-212ENST00000539975 DCTN1Q14203 1278 aa8.41□□□□□ -1.06
SNHG1-212ENST00000539975 METTL3Q86U44 580 aaKnown RBP8.41□□□□□ -1.06
SNHG1-212ENST00000539975 SLF2Q8IX21 1173 aa8.41□□□□□ -1.06
SNHG1-212ENST00000539975 CAMKK2Q96RR4 588 aa8.41□□□□□ -1.06
SNHG1-212ENST00000539975 CHMP4AQ9BY43 222 aa8.41□□□□□ -1.06
SNHG1-212ENST00000539975 ATG3Q9NT62 314 aa8.41□□□□□ -1.06
SNHG1-212ENST00000539975 STK32BQ9NY57 414 aa8.41□□□□□ -1.06
SNHG1-212ENST00000539975 ASAP1Q9ULH1 1129 aa8.41□□□□□ -1.06
SNHG1-212ENST00000539975 SALL2Q9Y467 1007 aaPredicted RBP8.41□□□□□ -1.06
SNHG1-212ENST00000539975 LOC102724428A0A0B4J2F2 783 aa8.4□□□□□ -1.06
SNHG1-212ENST00000539975 RCCD1A6NED2 376 aa8.4□□□□□ -1.06
SNHG1-212ENST00000539975 IRF6O14896 467 aa8.4□□□□□ -1.06
SNHG1-212ENST00000539975 STARD3NLO95772 234 aa8.4□□□□□ -1.06
SNHG1-212ENST00000539975 SIK1P57059 783 aa8.4□□□□□ -1.06
SNHG1-212ENST00000539975 GNAI1P63096 354 aa8.4□□□□□ -1.06
SNHG1-212ENST00000539975 ZNF790Q6PG37 636 aa8.4□□□□□ -1.06
SNHG1-212ENST00000539975 PTF1AQ7RTS3 328 aa8.4□□□□□ -1.06
SNHG1-212ENST00000539975 ZC3H15Q8WU90 426 aaKnown RBP8.4□□□□□ -1.06
SNHG1-212ENST00000539975 FMNL2Q96PY5 1086 aa8.4□□□□□ -1.06
SNHG1-212ENST00000539975 TMEM134Q9H6X4 195 aa8.4□□□□□ -1.06
SNHG1-212ENST00000539975 BABAM1Q9NWV8 329 aa8.4□□□□□ -1.06
SNHG1-212ENST00000539975 TSPYL4Q9UJ04 414 aa8.4□□□□□ -1.06
SNHG1-212ENST00000539975 BRWD3Q6RI45 1802 aa8.4□□□□□ -1.07
SNHG1-212ENST00000539975 WNK3Q9BYP7 1800 aa8.4□□□□□ -1.07
SNHG1-212ENST00000539975 KDM6AO15550 1401 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-212ENST00000539975 ZMYND10O75800 440 aa8.39□□□□□ -1.07
SNHG1-212ENST00000539975 PPP4CP60510 307 aa8.39□□□□□ -1.07
SNHG1-212ENST00000539975 SLC39A6Q13433 755 aa8.39□□□□□ -1.07
SNHG1-212ENST00000539975 CCDC27Q2M243 656 aa8.39□□□□□ -1.07
SNHG1-212ENST00000539975 FAM161AQ3B820 660 aa8.39□□□□□ -1.07
SNHG1-212ENST00000539975 SWT1Q5T5J6 900 aaKnown RBP8.39□□□□□ -1.07
SNHG1-212ENST00000539975 AK7Q96M32 723 aa8.39□□□□□ -1.07
SNHG1-212ENST00000539975 TFCP2L1Q9NZI6 479 aa8.39□□□□□ -1.07
SNHG1-212ENST00000539975 HPS5Q9UPZ3 1129 aa8.39□□□□□ -1.07
SNHG1-212ENST00000539975 PKD1L3Q7Z443 1732 aa8.39□□□□□ -1.07
SNHG1-212ENST00000539975 CEMIPQ8WUJ3 1361 aa8.38□□□□□ -1.07
SNHG1-212ENST00000539975 SNRPA1P09661 255 aaKnown RBP8.38□□□□□ -1.07
SNHG1-212ENST00000539975 FLAD1Q8NFF5 587 aa8.38□□□□□ -1.07
SNHG1-212ENST00000539975 THUMPD2Q9BTF0 503 aaKnown RBP8.38□□□□□ -1.07
SNHG1-212ENST00000539975 WDR63Q8IWG1 891 aa8.37□□□□□ -1.07
SNHG1-212ENST00000539975 WWC1Q8IX03 1113 aa8.37□□□□□ -1.07
SNHG1-212ENST00000539975 MYH16Q9H6N6 1097 aa8.37□□□□□ -1.07
SNHG1-212ENST00000539975 IFT57Q9NWB7 429 aa8.37□□□□□ -1.07
SNHG1-212ENST00000539975 MIS18AQ9NYP9 233 aa8.37□□□□□ -1.07
SNHG1-212ENST00000539975 SENP3-EIF4A1A0A087X0R7 540 aa8.36□□□□□ -1.07
SNHG1-212ENST00000539975 HNRNPUQ00839 825 aaKnown RBP eCLIP8.36□□□□□ -1.07
SNHG1-212ENST00000539975 SLC15A2Q16348 729 aa8.36□□□□□ -1.07
SNHG1-212ENST00000539975 ZNF496Q96IT1 587 aaPredicted RBP8.36□□□□□ -1.07
SNHG1-212ENST00000539975 ARXQ96QS3 562 aa8.36□□□□□ -1.07
SNHG1-212ENST00000539975 WBP1LQ9NX94 342 aa8.36□□□□□ -1.07
SNHG1-212ENST00000539975 RTCBQ9Y3I0 505 aaKnown RBP8.36□□□□□ -1.07
SNHG1-212ENST00000539975 NHSQ6T4R5 1651 aa8.36□□□□□ -1.07
SNHG1-212ENST00000539975 IL16Q14005 1332 aa8.35□□□□□ -1.07
SNHG1-212ENST00000539975 KCNQ4P56696 695 aa8.35□□□□□ -1.07
SNHG1-212ENST00000539975 R3HDM1Q15032 1099 aaKnown RBP8.35□□□□□ -1.07
SNHG1-212ENST00000539975 TRAPPC3LQ5T215 181 aa8.35□□□□□ -1.07
SNHG1-212ENST00000539975 KRI1Q8N9T8 703 aaKnown RBP8.35□□□□□ -1.07
SNHG1-212ENST00000539975 PRR14Q9BWN1 585 aa8.35□□□□□ -1.07
SNHG1-212ENST00000539975 DAXXQ9UER7 740 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-212ENST00000539975 DOT1LQ8TEK3 1739 aa8.34□□□□□ -1.07
SNHG1-212ENST00000539975 CHL1O00533 1208 aa8.34□□□□□ -1.07
SNHG1-212ENST00000539975 RFC4P35249 363 aa8.34□□□□□ -1.07
SNHG1-212ENST00000539975 RC3H1Q5TC82 1133 aaKnown RBP8.34□□□□□ -1.07
SNHG1-212ENST00000539975 DNAJC10Q8IXB1 793 aa8.34□□□□□ -1.07
SNHG1-212ENST00000539975 LRRC4BQ9NT99 713 aa8.34□□□□□ -1.07
SNHG1-212ENST00000539975 CCDC87Q9NVE4 849 aa8.34□□□□□ -1.07
SNHG1-212ENST00000539975 ZNF330Q9Y3S2 320 aaPredicted RBP8.34□□□□□ -1.07
SNHG1-212ENST00000539975 HEG1Q9ULI3 1381 aa8.34□□□□□ -1.07
SNHG1-212ENST00000539975 A0A087WZG4 1122 aa8.33□□□□□ -1.08
SNHG1-212ENST00000539975 E9PSI1 815 aa8.33□□□□□ -1.08
SNHG1-212ENST00000539975 RNF40O75150 1001 aa8.33□□□□□ -1.08
SNHG1-212ENST00000539975 ZPR1O75312 459 aa8.33□□□□□ -1.08
SNHG1-212ENST00000539975 EIF2S2P20042 333 aaKnown RBP8.33□□□□□ -1.08
SNHG1-212ENST00000539975 CANXP27824 592 aaKnown RBP8.33□□□□□ -1.08
SNHG1-212ENST00000539975 SSFA2P28290 1259 aa8.33□□□□□ -1.08
SNHG1-212ENST00000539975 CRKLP46109 303 aaKnown RBP8.33□□□□□ -1.08
SNHG1-212ENST00000539975 EIF4A1P60842 406 aaKnown RBP8.33□□□□□ -1.08
SNHG1-212ENST00000539975 CCDC102AQ96A19 550 aa8.33□□□□□ -1.08
SNHG1-212ENST00000539975 MBIPQ9NS73 344 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms