RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 TRPC5Q9UL62 973 aaPredicted RBP20.95■□□□□ 0.94
PCDHB17P-201ENST00000539533 IL6STP40189 918 aaPredicted RBP20.95■□□□□ 0.94
PCDHB17P-201ENST00000539533 KLHDC4Q8TBB5 520 aa20.95■□□□□ 0.94
PCDHB17P-201ENST00000539533 SMARCC1Q92922 1105 aaPredicted RBP20.95■□□□□ 0.94
PCDHB17P-201ENST00000539533 ATRNO75882 1429 aa20.94■□□□□ 0.94
PCDHB17P-201ENST00000539533 MX1P20591 662 aa20.94■□□□□ 0.94
PCDHB17P-201ENST00000539533 CRKLP46109 303 aaKnown RBP20.94■□□□□ 0.94
PCDHB17P-201ENST00000539533 NUTM1Q86Y26 1132 aa20.94■□□□□ 0.94
PCDHB17P-201ENST00000539533 MFAP1P55081 439 aaKnown RBP20.94■□□□□ 0.94
PCDHB17P-201ENST00000539533 TBC1D2BQ9UPU7 963 aa20.94■□□□□ 0.94
PCDHB17P-201ENST00000539533 RABL6Q3YEC7 729 aaPredicted RBP20.93■□□□□ 0.94
PCDHB17P-201ENST00000539533 GIGYF2Q6Y7W6 1299 aaKnown RBP20.93■□□□□ 0.94
PCDHB17P-201ENST00000539533 CCDC87Q9NVE4 849 aa20.93■□□□□ 0.94
PCDHB17P-201ENST00000539533 COL15A1P39059 1388 aa20.93■□□□□ 0.94
PCDHB17P-201ENST00000539533 ONECUT3O60422 494 aaPredicted RBP20.93■□□□□ 0.94
PCDHB17P-201ENST00000539533 SDSP20132 328 aa20.93■□□□□ 0.94
PCDHB17P-201ENST00000539533 TBC1D9Q6ZT07 1266 aa20.93■□□□□ 0.94
PCDHB17P-201ENST00000539533 SIL1Q9H173 461 aa20.93■□□□□ 0.94
PCDHB17P-201ENST00000539533 QTRT2Q9H974 415 aaKnown RBP20.93■□□□□ 0.94
PCDHB17P-201ENST00000539533 EIF5P55010 431 aaKnown RBP20.92■□□□□ 0.94
PCDHB17P-201ENST00000539533 KCNQ4P56696 695 aa20.92■□□□□ 0.94
PCDHB17P-201ENST00000539533 FOXO4P98177 505 aa20.92■□□□□ 0.94
PCDHB17P-201ENST00000539533 L1TD1Q5T7N2 865 aaKnown RBP20.92■□□□□ 0.94
PCDHB17P-201ENST00000539533 DZIP3Q86Y13 1208 aaKnown RBP20.92■□□□□ 0.94
PCDHB17P-201ENST00000539533 SEPT12Q8IYM1 358 aa20.92■□□□□ 0.94
PCDHB17P-201ENST00000539533 TRIM28Q13263 835 aaKnown RBP20.91■□□□□ 0.94
PCDHB17P-201ENST00000539533 LMBR1LQ6UX01 489 aa20.91■□□□□ 0.94
PCDHB17P-201ENST00000539533 GPTP24298 496 aa20.9■□□□□ 0.94
PCDHB17P-201ENST00000539533 G3BP1Q13283 466 aaKnown RBP eCLIP20.9■□□□□ 0.94
PCDHB17P-201ENST00000539533 STAP2Q9UGK3 403 aa20.9■□□□□ 0.94
PCDHB17P-201ENST00000539533 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.9■□□□□ 0.94
PCDHB17P-201ENST00000539533 SASH1O94885 1247 aa20.9■□□□□ 0.94
PCDHB17P-201ENST00000539533 RFX5P48382 616 aaPredicted RBP20.9■□□□□ 0.94
PCDHB17P-201ENST00000539533 C22orf23Q9BZE7 217 aa20.9■□□□□ 0.94
PCDHB17P-201ENST00000539533 CDC45O75419 566 aa20.89■□□□□ 0.94
PCDHB17P-201ENST00000539533 MYH14Q7Z406 1995 aaKnown RBP20.89■□□□□ 0.93
PCDHB17P-201ENST00000539533 PTPN12Q05209 780 aaKnown RBP20.88■□□□□ 0.93
PCDHB17P-201ENST00000539533 ERC1Q8IUD2 1116 aa20.88■□□□□ 0.93
PCDHB17P-201ENST00000539533 FAM89AQ96GI7 184 aa20.88■□□□□ 0.93
PCDHB17P-201ENST00000539533 SPRYD3Q8NCJ5 442 aa20.88■□□□□ 0.93
PCDHB17P-201ENST00000539533 COPRSQ9NQ92 184 aa20.88■□□□□ 0.93
PCDHB17P-201ENST00000539533 CHMP3Q9Y3E7 222 aa20.88■□□□□ 0.93
PCDHB17P-201ENST00000539533 ERVV-1B6SEH8 477 aa20.87■□□□□ 0.93
PCDHB17P-201ENST00000539533 CLASRPQ8N2M8 674 aaKnown RBP20.87■□□□□ 0.93
PCDHB17P-201ENST00000539533 HSP90AB3PQ58FF7 597 aa20.87■□□□□ 0.93
PCDHB17P-201ENST00000539533 NLRP10Q86W26 655 aa20.87■□□□□ 0.93
PCDHB17P-201ENST00000539533 SYNE4Q8N205 404 aa20.87■□□□□ 0.93
PCDHB17P-201ENST00000539533 LINC00116Q8NCU8 138 aa20.87■□□□□ 0.93
PCDHB17P-201ENST00000539533 MCM4P33991 863 aa20.86■□□□□ 0.93
PCDHB17P-201ENST00000539533 CICQ96RK0 1608 aaPredicted RBP20.86■□□□□ 0.93
PCDHB17P-201ENST00000539533 PCCAP05165 728 aaPredicted RBP20.86■□□□□ 0.93
PCDHB17P-201ENST00000539533 NUP98P52948 1817 aa20.85■□□□□ 0.93
PCDHB17P-201ENST00000539533 ZBTB38Q8NAP3 1195 aaPredicted RBP20.85■□□□□ 0.93
PCDHB17P-201ENST00000539533 RRAGDQ9NQL2 400 aaPredicted RBP20.85■□□□□ 0.93
PCDHB17P-201ENST00000539533 BTAF1O14981 1849 aa20.85■□□□□ 0.93
PCDHB17P-201ENST00000539533 RREB1Q92766 1687 aa20.84■□□□□ 0.93
PCDHB17P-201ENST00000539533 PI4K2BQ8TCG2 481 aa20.84■□□□□ 0.93
PCDHB17P-201ENST00000539533 CHMP5Q9NZZ3 219 aa20.84■□□□□ 0.93
PCDHB17P-201ENST00000539533 NHSQ6T4R5 1651 aa20.84■□□□□ 0.93
PCDHB17P-201ENST00000539533 EP400Q96L91 3159 aa20.84■□□□□ 0.93
PCDHB17P-201ENST00000539533 COL5A3P25940 1745 aaPredicted RBP20.84■□□□□ 0.93
PCDHB17P-201ENST00000539533 AACSQ86V21 672 aa20.83■□□□□ 0.93
PCDHB17P-201ENST00000539533 EAF2Q96CJ1 260 aaPredicted RBP20.83■□□□□ 0.93
PCDHB17P-201ENST00000539533 AOX1Q06278 1338 aa20.83■□□□□ 0.93
PCDHB17P-201ENST00000539533 TRIM6-TRIM34B2RNG4 842 aa20.83■□□□□ 0.93
PCDHB17P-201ENST00000539533 CAMTA2O94983 1202 aa20.82■□□□□ 0.92
PCDHB17P-201ENST00000539533 IFIT2P09913 472 aaKnown RBP20.82■□□□□ 0.92
PCDHB17P-201ENST00000539533 ZNF34Q8IZ26 560 aa20.82■□□□□ 0.92
PCDHB17P-201ENST00000539533 RILPL2Q969X0 211 aa20.82■□□□□ 0.92
PCDHB17P-201ENST00000539533 UBN2Q6ZU65 1347 aa20.82■□□□□ 0.92
PCDHB17P-201ENST00000539533 ANKRD36CQ5JPF3 1778 aa20.82■□□□□ 0.92
PCDHB17P-201ENST00000539533 TUBGCP6Q96RT7 1819 aa20.82■□□□□ 0.92
PCDHB17P-201ENST00000539533 ZNF831Q5JPB2 1677 aa20.82■□□□□ 0.92
PCDHB17P-201ENST00000539533 MAP4K4O95819 1239 aaPredicted RBP20.81■□□□□ 0.92
PCDHB17P-201ENST00000539533 CCDC8Q9H0W5 538 aaPredicted RBP20.81■□□□□ 0.92
PCDHB17P-201ENST00000539533 SMIM5Q71RC9 77 aa20.81■□□□□ 0.92
PCDHB17P-201ENST00000539533 ZNF594Q96JF6 807 aaPredicted RBP20.81■□□□□ 0.92
PCDHB17P-201ENST00000539533 CCDC85AQ96PX6 553 aaPredicted RBP20.81■□□□□ 0.92
PCDHB17P-201ENST00000539533 TRMT112Q9UI30 125 aaKnown RBP20.81■□□□□ 0.92
PCDHB17P-201ENST00000539533 SBF2Q86WG5 1849 aa20.8■□□□□ 0.92
PCDHB17P-201ENST00000539533 GOLGA6L3A6NEY3 463 aa20.8■□□□□ 0.92
PCDHB17P-201ENST00000539533 TFCP2Q12800 502 aa20.8■□□□□ 0.92
PCDHB17P-201ENST00000539533 USP42Q9H9J4 1324 aaKnown RBP20.8■□□□□ 0.92
PCDHB17P-201ENST00000539533 FSD2A1L4K1 749 aa20.8■□□□□ 0.92
PCDHB17P-201ENST00000539533 PLA2G12BQ9BX93 195 aa20.8■□□□□ 0.92
PCDHB17P-201ENST00000539533 TLR7Q9NYK1 1049 aaKnown RBP20.8■□□□□ 0.92
PCDHB17P-201ENST00000539533 TTC41PQ6P2S7 1318 aa20.79■□□□□ 0.92
PCDHB17P-201ENST00000539533 CCNL1Q9UK58 526 aaPredicted RBP20.79■□□□□ 0.92
PCDHB17P-201ENST00000539533 CDHR2Q9BYE9 1310 aa20.79■□□□□ 0.92
PCDHB17P-201ENST00000539533 ECHDC1Q9NTX5 307 aa20.79■□□□□ 0.92
PCDHB17P-201ENST00000539533 XRCC6P12956 609 aaKnown RBP eCLIP20.78■□□□□ 0.92
PCDHB17P-201ENST00000539533 CASC1Q6TDU7 716 aa20.78■□□□□ 0.92
PCDHB17P-201ENST00000539533 ATG9AQ7Z3C6 839 aa20.78■□□□□ 0.92
PCDHB17P-201ENST00000539533 HSCBQ8IWL3 235 aa20.78■□□□□ 0.92
PCDHB17P-201ENST00000539533 CNTNAP4Q9C0A0 1308 aa20.78■□□□□ 0.92
PCDHB17P-201ENST00000539533 FAM177BA6PVY3 158 aa20.78■□□□□ 0.92
PCDHB17P-201ENST00000539533 CSF1RP07333 972 aa20.78■□□□□ 0.92
PCDHB17P-201ENST00000539533 SUSD4Q5VX71 490 aa20.78■□□□□ 0.92
PCDHB17P-201ENST00000539533 IRS4O14654 1257 aaPredicted RBP20.77■□□□□ 0.92
PCDHB17P-201ENST00000539533 LRRC24Q50LG9 513 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms