RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 TBC1D2BQ9UPU7 963 aa13.75□□□□□ -0.21
CTCFL-212ENST00000539382 RHPN1Q8TCX5 695 aa13.74□□□□□ -0.21
CTCFL-212ENST00000539382 IL6STP40189 918 aaPredicted RBP13.74□□□□□ -0.21
CTCFL-212ENST00000539382 PDE1AP54750 535 aa13.74□□□□□ -0.21
CTCFL-212ENST00000539382 EIF5P55010 431 aaKnown RBP13.74□□□□□ -0.21
CTCFL-212ENST00000539382 FOXO4P98177 505 aa13.74□□□□□ -0.21
CTCFL-212ENST00000539382 RABL6Q3YEC7 729 aaPredicted RBP13.74□□□□□ -0.21
CTCFL-212ENST00000539382 TTC22Q5TAA0 569 aa13.74□□□□□ -0.21
CTCFL-212ENST00000539382 KIF6Q6ZMV9 814 aa13.74□□□□□ -0.21
CTCFL-212ENST00000539382 CCDC191Q8NCU4 936 aa13.74□□□□□ -0.21
CTCFL-212ENST00000539382 CCDC87Q9NVE4 849 aa13.74□□□□□ -0.21
CTCFL-212ENST00000539382 DAXXQ9UER7 740 aaPredicted RBP13.74□□□□□ -0.21
CTCFL-212ENST00000539382 GIGYF2Q6Y7W6 1299 aaKnown RBP13.73□□□□□ -0.21
CTCFL-212ENST00000539382 SYNE4Q8N205 404 aa13.73□□□□□ -0.21
CTCFL-212ENST00000539382 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
CTCFL-212ENST00000539382 RAB11FIP3O75154 756 aa13.73□□□□□ -0.21
CTCFL-212ENST00000539382 LINC00116Q8NCU8 138 aa13.73□□□□□ -0.21
CTCFL-212ENST00000539382 SMARCC1Q92922 1105 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-212ENST00000539382 COL15A1P39059 1388 aa13.72□□□□□ -0.21
CTCFL-212ENST00000539382 GPTP24298 496 aa13.72□□□□□ -0.21
CTCFL-212ENST00000539382 RFX5P48382 616 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-212ENST00000539382 SMIM5Q71RC9 77 aa13.72□□□□□ -0.21
CTCFL-212ENST00000539382 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
CTCFL-212ENST00000539382 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
CTCFL-212ENST00000539382 OSBPL3Q9H4L5 887 aa13.72□□□□□ -0.21
CTCFL-212ENST00000539382 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.21
CTCFL-212ENST00000539382 SASH1O94885 1247 aa13.71□□□□□ -0.21
CTCFL-212ENST00000539382 TRIM28Q13263 835 aaKnown RBP13.71□□□□□ -0.21
CTCFL-212ENST00000539382 LMBR1LQ6UX01 489 aa13.71□□□□□ -0.21
CTCFL-212ENST00000539382 KIF1BPQ96EK5 621 aa13.71□□□□□ -0.21
CTCFL-212ENST00000539382 SIL1Q9H173 461 aa13.71□□□□□ -0.21
CTCFL-212ENST00000539382 SDSP20132 328 aa13.71□□□□□ -0.21
CTCFL-212ENST00000539382 PAXIP1Q6ZW49 1069 aaPredicted RBP13.71□□□□□ -0.21
CTCFL-212ENST00000539382 FAM89AQ96GI7 184 aa13.71□□□□□ -0.21
CTCFL-212ENST00000539382 BTAF1O14981 1849 aa13.71□□□□□ -0.22
CTCFL-212ENST00000539382 CICQ96RK0 1608 aaPredicted RBP13.71□□□□□ -0.22
CTCFL-212ENST00000539382 MX1P20591 662 aa13.7□□□□□ -0.22
CTCFL-212ENST00000539382 PTPN12Q05209 780 aaKnown RBP13.7□□□□□ -0.22
CTCFL-212ENST00000539382 TBC1D9Q6ZT07 1266 aa13.7□□□□□ -0.22
CTCFL-212ENST00000539382 RREB1Q92766 1687 aa13.7□□□□□ -0.22
CTCFL-212ENST00000539382 NLRP10Q86W26 655 aa13.7□□□□□ -0.22
CTCFL-212ENST00000539382 PROM2Q8N271 834 aa13.7□□□□□ -0.22
CTCFL-212ENST00000539382 STAP2Q9UGK3 403 aa13.7□□□□□ -0.22
CTCFL-212ENST00000539382 COL5A3P25940 1745 aaPredicted RBP13.69□□□□□ -0.22
CTCFL-212ENST00000539382 NHSQ6T4R5 1651 aa13.69□□□□□ -0.22
CTCFL-212ENST00000539382 UBN2Q6ZU65 1347 aa13.69□□□□□ -0.22
CTCFL-212ENST00000539382 OS9Q13438 667 aaPredicted RBP13.69□□□□□ -0.22
CTCFL-212ENST00000539382 ERVV-1B6SEH8 477 aa13.69□□□□□ -0.22
CTCFL-212ENST00000539382 MFAP1P55081 439 aaKnown RBP13.69□□□□□ -0.22
CTCFL-212ENST00000539382 HSP90AB4PQ58FF6 505 aa13.69□□□□□ -0.22
CTCFL-212ENST00000539382 NUP98P52948 1817 aa13.68□□□□□ -0.22
CTCFL-212ENST00000539382 SBF2Q86WG5 1849 aa13.68□□□□□ -0.22
CTCFL-212ENST00000539382 CAMTA2O94983 1202 aa13.68□□□□□ -0.22
CTCFL-212ENST00000539382 COPRSQ9NQ92 184 aa13.68□□□□□ -0.22
CTCFL-212ENST00000539382 AMIGO3Q86WK7 504 aa13.67□□□□□ -0.22
CTCFL-212ENST00000539382 ZNF34Q8IZ26 560 aa13.67□□□□□ -0.22
CTCFL-212ENST00000539382 ZBTB38Q8NAP3 1195 aaPredicted RBP13.67□□□□□ -0.22
CTCFL-212ENST00000539382 PCCAP05165 728 aaPredicted RBP13.67□□□□□ -0.22
CTCFL-212ENST00000539382 PI4K2BQ8TCG2 481 aa13.67□□□□□ -0.22
CTCFL-212ENST00000539382 EAF2Q96CJ1 260 aaPredicted RBP13.67□□□□□ -0.22
CTCFL-212ENST00000539382 ZNF831Q5JPB2 1677 aa13.67□□□□□ -0.22
CTCFL-212ENST00000539382 G3BP1Q13283 466 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTCFL-212ENST00000539382 TBC1D32Q96NH3 1257 aa13.66□□□□□ -0.22
CTCFL-212ENST00000539382 CHMP3Q9Y3E7 222 aa13.66□□□□□ -0.22
CTCFL-212ENST00000539382 BRWD3Q6RI45 1802 aa13.66□□□□□ -0.22
CTCFL-212ENST00000539382 ZNF594Q96JF6 807 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-212ENST00000539382 CCDC85AQ96PX6 553 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-212ENST00000539382 TLR7Q9NYK1 1049 aaKnown RBP13.66□□□□□ -0.22
CTCFL-212ENST00000539382 TUBGCP6Q96RT7 1819 aa13.66□□□□□ -0.22
CTCFL-212ENST00000539382 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
CTCFL-212ENST00000539382 CDC45O75419 566 aa13.65□□□□□ -0.22
CTCFL-212ENST00000539382 HSP90AB3PQ58FF7 597 aa13.65□□□□□ -0.22
CTCFL-212ENST00000539382 ERC1Q8IUD2 1116 aa13.65□□□□□ -0.22
CTCFL-212ENST00000539382 CLASRPQ8N2M8 674 aaKnown RBP13.65□□□□□ -0.22
CTCFL-212ENST00000539382 CCNL1Q9UK58 526 aaPredicted RBP13.65□□□□□ -0.22
CTCFL-212ENST00000539382 MAP4K4O95819 1239 aaPredicted RBP13.64□□□□□ -0.23
CTCFL-212ENST00000539382 TFCP2Q12800 502 aa13.64□□□□□ -0.23
CTCFL-212ENST00000539382 SUSD4Q5VX71 490 aa13.64□□□□□ -0.23
CTCFL-212ENST00000539382 ATG9AQ7Z3C6 839 aa13.64□□□□□ -0.23
CTCFL-212ENST00000539382 KRT27Q7Z3Y8 459 aa13.64□□□□□ -0.23
CTCFL-212ENST00000539382 AACSQ86V21 672 aa13.64□□□□□ -0.23
CTCFL-212ENST00000539382 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
CTCFL-212ENST00000539382 CCDC8Q9H0W5 538 aaPredicted RBP13.64□□□□□ -0.23
CTCFL-212ENST00000539382 LRRC4BQ9NT99 713 aa13.64□□□□□ -0.23
CTCFL-212ENST00000539382 TRMT112Q9UI30 125 aaKnown RBP13.64□□□□□ -0.23
CTCFL-212ENST00000539382 CNTNAP4Q9C0A0 1308 aa13.64□□□□□ -0.23
CTCFL-212ENST00000539382 FAM177BA6PVY3 158 aa13.64□□□□□ -0.23
CTCFL-212ENST00000539382 PLA2G12BQ9BX93 195 aa13.64□□□□□ -0.23
CTCFL-212ENST00000539382 BCL11BQ9C0K0 894 aaPredicted RBP13.64□□□□□ -0.23
CTCFL-212ENST00000539382 USP42Q9H9J4 1324 aaKnown RBP13.63□□□□□ -0.23
CTCFL-212ENST00000539382 CSF1RP07333 972 aa13.63□□□□□ -0.23
CTCFL-212ENST00000539382 LRRC24Q50LG9 513 aa13.63□□□□□ -0.23
CTCFL-212ENST00000539382 PUS3Q9BZE2 481 aaKnown RBP13.63□□□□□ -0.23
CTCFL-212ENST00000539382 IRS4O14654 1257 aaPredicted RBP13.62□□□□□ -0.23
CTCFL-212ENST00000539382 LY75O60449 1722 aa13.62□□□□□ -0.23
CTCFL-212ENST00000539382 C22orf23Q9BZE7 217 aa13.62□□□□□ -0.23
CTCFL-212ENST00000539382 AOX1Q06278 1338 aa13.62□□□□□ -0.23
CTCFL-212ENST00000539382 CDHR2Q9BYE9 1310 aa13.62□□□□□ -0.23
CTCFL-212ENST00000539382 TRIM37O94972 964 aa13.62□□□□□ -0.23
CTCFL-212ENST00000539382 TTLL11Q8NHH1 800 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms