RNA–Protein interactions for RNA: ENST00000535765.5

VPS37B-203, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-203ENST00000535765 RASSF7Q02833 373 aa30.21■■■□□ 2.43
VPS37B-203ENST00000535765 NTSR2O95665 410 aa30.2■■■□□ 2.43
VPS37B-203ENST00000535765 ERFEQ4G0M1 354 aa30.2■■■□□ 2.43
VPS37B-203ENST00000535765 PRPF40BQ6NWY9 871 aaKnown RBP30.2■■■□□ 2.43
VPS37B-203ENST00000535765 SPINK5Q9NQ38 1064 aaPredicted RBP30.19■■■□□ 2.42
VPS37B-203ENST00000535765 SBF1O95248 1867 aa30.18■■■□□ 2.42
VPS37B-203ENST00000535765 CACNA1SQ13698 1873 aa30.18■■■□□ 2.42
VPS37B-203ENST00000535765 ABCC12Q96J65 1359 aa30.17■■■□□ 2.42
VPS37B-203ENST00000535765 NLRP10Q86W26 655 aa30.17■■■□□ 2.42
VPS37B-203ENST00000535765 UTP14AQ9BVJ6 771 aaKnown RBP30.17■■■□□ 2.42
VPS37B-203ENST00000535765 STK31Q9BXU1 1019 aa30.17■■■□□ 2.42
VPS37B-203ENST00000535765 PHAXQ9H814 394 aaKnown RBP30.17■■■□□ 2.42
VPS37B-203ENST00000535765 SLX4Q8IY92 1834 aa30.17■■■□□ 2.42
VPS37B-203ENST00000535765 LMNB1P20700 586 aa30.16■■■□□ 2.42
VPS37B-203ENST00000535765 C1QTNF8P60827 252 aa30.16■■■□□ 2.42
VPS37B-203ENST00000535765 TRIM28Q13263 835 aaKnown RBP30.16■■■□□ 2.42
VPS37B-203ENST00000535765 SLC10A5Q5PT55 438 aa30.16■■■□□ 2.42
VPS37B-203ENST00000535765 NFKBIEO00221 500 aa30.15■■■□□ 2.42
VPS37B-203ENST00000535765 VAMP4O75379 141 aa30.15■■■□□ 2.42
VPS37B-203ENST00000535765 CRY2Q49AN0 593 aa30.15■■■□□ 2.42
VPS37B-203ENST00000535765 ISCA1Q9BUE6 129 aa30.15■■■□□ 2.42
VPS37B-203ENST00000535765 TNRC6CQ9HCJ0 1690 aaKnown RBP30.14■■■□□ 2.42
VPS37B-203ENST00000535765 EXOSC9Q06265 439 aaKnown RBP30.14■■■□□ 2.42
VPS37B-203ENST00000535765 SOGA3Q5TF21 947 aa30.14■■■□□ 2.42
VPS37B-203ENST00000535765 DDX58O95786 925 aaKnown RBP30.13■■■□□ 2.41
VPS37B-203ENST00000535765 RIC3Q7Z5B4 369 aa30.13■■■□□ 2.41
VPS37B-203ENST00000535765 MIER1Q8N108 512 aa30.13■■■□□ 2.41
VPS37B-203ENST00000535765 FER1L6Q2WGJ9 1857 aa30.12■■■□□ 2.41
VPS37B-203ENST00000535765 ALDH1B1P30837 517 aa30.12■■■□□ 2.41
VPS37B-203ENST00000535765 RPGRQ92834 1020 aaKnown RBP30.11■■■□□ 2.41
VPS37B-203ENST00000535765 CCDC88AQ3V6T2 1871 aa30.1■■■□□ 2.41
VPS37B-203ENST00000535765 PRELPP51888 382 aa30.1■■■□□ 2.41
VPS37B-203ENST00000535765 E9PSI1 815 aa30.09■■■□□ 2.41
VPS37B-203ENST00000535765 SLC4A2P04920 1241 aa30.09■■■□□ 2.41
VPS37B-203ENST00000535765 HOXA10P31260 410 aaPredicted RBP30.09■■■□□ 2.41
VPS37B-203ENST00000535765 TAOK3Q9H2K8 898 aa30.09■■■□□ 2.41
VPS37B-203ENST00000535765 TRMT112Q9UI30 125 aaKnown RBP30.09■■■□□ 2.41
VPS37B-203ENST00000535765 CCDC93Q567U6 631 aa30.08■■■□□ 2.41
VPS37B-203ENST00000535765 KSR2Q6VAB6 950 aa30.08■■■□□ 2.41
VPS37B-203ENST00000535765 C7orf43Q8WVR3 580 aa30.08■■■□□ 2.41
VPS37B-203ENST00000535765 NLRP3Q96P20 1036 aa30.08■■■□□ 2.41
VPS37B-203ENST00000535765 LAMB2P55268 1798 aa30.08■■■□□ 2.41
VPS37B-203ENST00000535765 SH3TC1Q8TE82 1336 aa30.07■■■□□ 2.4
VPS37B-203ENST00000535765 ZC3H4Q9UPT8 1303 aaKnown RBP30.07■■■□□ 2.4
VPS37B-203ENST00000535765 KDM2BQ8NHM5 1336 aa30.06■■■□□ 2.4
VPS37B-203ENST00000535765 LTBP3Q9NS15 1303 aa30.06■■■□□ 2.4
VPS37B-203ENST00000535765 METTL22Q9BUU2 404 aaPredicted RBP30.06■■■□□ 2.4
VPS37B-203ENST00000535765 ATP5J2-PTCD1G3V325 749 aa30.05■■■□□ 2.4
VPS37B-203ENST00000535765 RBM17Q96I25 401 aaKnown RBP30.05■■■□□ 2.4
VPS37B-203ENST00000535765 KIF3CO14782 793 aa30.04■■■□□ 2.4
VPS37B-203ENST00000535765 SLFN5Q08AF3 891 aa30.04■■■□□ 2.4
VPS37B-203ENST00000535765 C3orf67Q6ZVT6 689 aa30.04■■■□□ 2.4
VPS37B-203ENST00000535765 CCDC191Q8NCU4 936 aa30.04■■■□□ 2.4
VPS37B-203ENST00000535765 CRAMP1Q96RY5 1269 aa30.04■■■□□ 2.4
VPS37B-203ENST00000535765 NMRK2Q9NPI5 230 aa30.04■■■□□ 2.4
VPS37B-203ENST00000535765 DDX60Q8IY21 1712 aaKnown RBP30.04■■■□□ 2.4
VPS37B-203ENST00000535765 DICER1Q9UPY3 1922 aaKnown RBP30.04■■■□□ 2.4
VPS37B-203ENST00000535765 PI4KAP2A4QPH2 592 aa30.03■■■□□ 2.4
VPS37B-203ENST00000535765 TCERG1O14776 1098 aaKnown RBP30.03■■■□□ 2.4
VPS37B-203ENST00000535765 PI4KAP1Q8N8J0 262 aa30.03■■■□□ 2.4
VPS37B-203ENST00000535765 ZNF428Q96B54 188 aa30.03■■■□□ 2.4
VPS37B-203ENST00000535765 MAP3K2Q9Y2U5 619 aa30.03■■■□□ 2.4
VPS37B-203ENST00000535765 HCLS1P14317 486 aaPredicted RBP30.02■■■□□ 2.4
VPS37B-203ENST00000535765 OLFM4Q6UX06 510 aa30.02■■■□□ 2.4
VPS37B-203ENST00000535765 G2E3Q7L622 706 aa30.02■■■□□ 2.4
VPS37B-203ENST00000535765 MYD88Q99836 296 aa30.02■■■□□ 2.4
VPS37B-203ENST00000535765 FLIIQ13045 1269 aa30.01■■■□□ 2.39
VPS37B-203ENST00000535765 RTKN2Q8IZC4 609 aa30.01■■■□□ 2.39
VPS37B-203ENST00000535765 SYNE4Q8N205 404 aa30.01■■■□□ 2.39
VPS37B-203ENST00000535765 TRMT2AQ8IZ69 625 aaKnown RBP30■■■□□ 2.39
VPS37B-203ENST00000535765 ZBTB38Q8NAP3 1195 aaPredicted RBP29.99■■■□□ 2.39
VPS37B-203ENST00000535765 HSP90B1P14625 803 aaKnown RBP29.98■■■□□ 2.39
VPS37B-203ENST00000535765 FKBP4Q02790 459 aaKnown RBP eCLIP29.98■■■□□ 2.39
VPS37B-203ENST00000535765 NEXNQ0ZGT2 675 aa29.98■■■□□ 2.39
VPS37B-203ENST00000535765 CC2D2BQ6DHV5 1058 aa29.98■■■□□ 2.39
VPS37B-203ENST00000535765 FAM89AQ96GI7 184 aa29.98■■■□□ 2.39
VPS37B-203ENST00000535765 CWC25Q9NXE8 425 aaPredicted RBP29.98■■■□□ 2.39
VPS37B-203ENST00000535765 GLTPD2A6NH11 291 aa29.97■■■□□ 2.39
VPS37B-203ENST00000535765 PPEF1O14829 653 aaPredicted RBP29.96■■■□□ 2.39
VPS37B-203ENST00000535765 PCCAP05165 728 aaPredicted RBP29.96■■■□□ 2.39
VPS37B-203ENST00000535765 GRIPAP1Q4V328 841 aa29.96■■■□□ 2.39
VPS37B-203ENST00000535765 DPY19L2Q6NUT2 758 aa29.96■■■□□ 2.39
VPS37B-203ENST00000535765 RRAGCQ9HB90 399 aa29.96■■■□□ 2.39
VPS37B-203ENST00000535765 FKBP5Q13451 457 aaPredicted RBP29.95■■■□□ 2.39
VPS37B-203ENST00000535765 SF3B3Q15393 1217 aaKnown RBP29.95■■■□□ 2.39
VPS37B-203ENST00000535765 C16orf71Q8IYS4 520 aaPredicted RBP29.95■■■□□ 2.39
VPS37B-203ENST00000535765 IGKV5-2P06315 115 aa29.94■■■□□ 2.38
VPS37B-203ENST00000535765 RTL5Q5HYW3 569 aaPredicted RBP29.94■■■□□ 2.38
VPS37B-203ENST00000535765 CDCA7LQ96GN5 454 aa29.94■■■□□ 2.38
VPS37B-203ENST00000535765 TMX4Q9H1E5 349 aaPredicted RBP29.94■■■□□ 2.38
VPS37B-203ENST00000535765 ZNF277Q9NRM2 450 aaPredicted RBP29.94■■■□□ 2.38
VPS37B-203ENST00000535765 IRS4O14654 1257 aaPredicted RBP29.93■■■□□ 2.38
VPS37B-203ENST00000535765 TOMM70O94826 608 aa29.93■■■□□ 2.38
VPS37B-203ENST00000535765 BBOX1O75936 387 aa29.92■■■□□ 2.38
VPS37B-203ENST00000535765 DDX46Q7L014 1031 aaKnown RBP29.92■■■□□ 2.38
VPS37B-203ENST00000535765 DNAAF4Q8WXU2 420 aa29.92■■■□□ 2.38
VPS37B-203ENST00000535765 ABCC4O15439 1325 aa29.92■■■□□ 2.38
VPS37B-203ENST00000535765 MYH3P11055 1940 aa29.91■■■□□ 2.38
VPS37B-203ENST00000535765 SNED1Q8TER0 1413 aa29.91■■■□□ 2.38
VPS37B-203ENST00000535765 CDHR2Q9BYE9 1310 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms