RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 PCCAP05165 728 aaPredicted RBP28.54■■■□□ 2.16
RBFOX1-206ENST00000535565 CASP7P55210 303 aa28.54■■■□□ 2.16
RBFOX1-206ENST00000535565 SF3B2Q13435 895 aaKnown RBP28.54■■■□□ 2.16
RBFOX1-206ENST00000535565 BICC1Q9H694 974 aaKnown RBP28.54■■■□□ 2.16
RBFOX1-206ENST00000535565 DCTPP1Q9H773 170 aa28.54■■■□□ 2.16
RBFOX1-206ENST00000535565 SRGAP3O43295 1099 aa28.54■■■□□ 2.16
RBFOX1-206ENST00000535565 PHF14O94880 888 aa28.54■■■□□ 2.16
RBFOX1-206ENST00000535565 RFC4P35249 363 aa28.54■■■□□ 2.16
RBFOX1-206ENST00000535565 PARP10Q53GL7 1025 aa28.54■■■□□ 2.16
RBFOX1-206ENST00000535565 ZBTB38Q8NAP3 1195 aaPredicted RBP28.54■■■□□ 2.16
RBFOX1-206ENST00000535565 SSH3Q8TE77 659 aa28.54■■■□□ 2.16
RBFOX1-206ENST00000535565 JARID2Q92833 1246 aaPredicted RBP28.54■■■□□ 2.16
RBFOX1-206ENST00000535565 ARHGEF1Q92888 912 aaKnown RBP28.54■■■□□ 2.16
RBFOX1-206ENST00000535565 SSFA2P28290 1259 aa28.53■■■□□ 2.16
RBFOX1-206ENST00000535565 KAZALD1Q96I82 304 aa28.53■■■□□ 2.16
RBFOX1-206ENST00000535565 SMIM5Q71RC9 77 aa28.52■■■□□ 2.16
RBFOX1-206ENST00000535565 UBN2Q6ZU65 1347 aa28.52■■■□□ 2.16
RBFOX1-206ENST00000535565 POLA2Q14181 598 aa28.51■■■□□ 2.15
RBFOX1-206ENST00000535565 USPL1Q5W0Q7 1092 aa28.51■■■□□ 2.15
RBFOX1-206ENST00000535565 PDZRN3Q9UPQ7 1066 aa28.51■■■□□ 2.15
RBFOX1-206ENST00000535565 NIP7Q9Y221 180 aaKnown RBP eCLIP28.51■■■□□ 2.15
RBFOX1-206ENST00000535565 RTL5Q5HYW3 569 aaPredicted RBP28.5■■■□□ 2.15
RBFOX1-206ENST00000535565 AMIGO3Q86WK7 504 aa28.5■■■□□ 2.15
RBFOX1-206ENST00000535565 TRMT112Q9UI30 125 aaKnown RBP28.5■■■□□ 2.15
RBFOX1-206ENST00000535565 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.5■■■□□ 2.15
RBFOX1-206ENST00000535565 CDHR2Q9BYE9 1310 aa28.49■■■□□ 2.15
RBFOX1-206ENST00000535565 USP42Q9H9J4 1324 aaKnown RBP28.49■■■□□ 2.15
RBFOX1-206ENST00000535565 MYH3P11055 1940 aa28.49■■■□□ 2.15
RBFOX1-206ENST00000535565 FAM89AQ96GI7 184 aa28.49■■■□□ 2.15
RBFOX1-206ENST00000535565 SRP68Q9UHB9 627 aaKnown RBP28.49■■■□□ 2.15
RBFOX1-206ENST00000535565 BAG6P46379 1132 aa28.48■■■□□ 2.15
RBFOX1-206ENST00000535565 NUCB1Q02818 461 aa28.48■■■□□ 2.15
RBFOX1-206ENST00000535565 RABL6Q3YEC7 729 aaPredicted RBP28.48■■■□□ 2.15
RBFOX1-206ENST00000535565 ZBTB47Q9UFB7 747 aaPredicted RBP28.48■■■□□ 2.15
RBFOX1-206ENST00000535565 TUBGCP6Q96RT7 1819 aa28.48■■■□□ 2.15
RBFOX1-206ENST00000535565 EPHA10Q5JZY3 1008 aa28.47■■■□□ 2.15
RBFOX1-206ENST00000535565 ANKRD45Q5TZF3 282 aa28.47■■■□□ 2.15
RBFOX1-206ENST00000535565 UTP14AQ9BVJ6 771 aaKnown RBP28.47■■■□□ 2.15
RBFOX1-206ENST00000535565 CAMKK2Q96RR4 588 aa28.46■■■□□ 2.15
RBFOX1-206ENST00000535565 BCL2L12Q9HB09 334 aa28.46■■■□□ 2.15
RBFOX1-206ENST00000535565 TFCP2L1Q9NZI6 479 aa28.46■■■□□ 2.15
RBFOX1-206ENST00000535565 COL24A1Q17RW2 1714 aa28.46■■■□□ 2.15
RBFOX1-206ENST00000535565 EN1Q05925 392 aaPredicted RBP28.45■■■□□ 2.15
RBFOX1-206ENST00000535565 SUSD4Q5VX71 490 aa28.45■■■□□ 2.15
RBFOX1-206ENST00000535565 CHD1LQ86WJ1 897 aa28.45■■■□□ 2.15
RBFOX1-206ENST00000535565 AKT1S1Q96B36 256 aa28.45■■■□□ 2.15
RBFOX1-206ENST00000535565 LAMB2P55268 1798 aa28.45■■■□□ 2.15
RBFOX1-206ENST00000535565 FOXO4P98177 505 aa28.45■■■□□ 2.14
RBFOX1-206ENST00000535565 PLA2G12BQ9BX93 195 aa28.45■■■□□ 2.14
RBFOX1-206ENST00000535565 SH3TC1Q8TE82 1336 aa28.44■■■□□ 2.14
RBFOX1-206ENST00000535565 EZH2Q15910 746 aaKnown RBP28.44■■■□□ 2.14
RBFOX1-206ENST00000535565 HSP90AB4PQ58FF6 505 aa28.44■■■□□ 2.14
RBFOX1-206ENST00000535565 EXOC6BQ9Y2D4 811 aa28.44■■■□□ 2.14
RBFOX1-206ENST00000535565 ZNF827Q17R98 1081 aa28.43■■■□□ 2.14
RBFOX1-206ENST00000535565 TBC1D9BQ66K14 1250 aa28.43■■■□□ 2.14
RBFOX1-206ENST00000535565 LMBR1LQ6UX01 489 aa28.43■■■□□ 2.14
RBFOX1-206ENST00000535565 IRS4O14654 1257 aaPredicted RBP28.42■■■□□ 2.14
RBFOX1-206ENST00000535565 SURF6O75683 361 aaKnown RBP28.42■■■□□ 2.14
RBFOX1-206ENST00000535565 HSP90B1P14625 803 aaKnown RBP28.42■■■□□ 2.14
RBFOX1-206ENST00000535565 RGS3P49796 1198 aa28.42■■■□□ 2.14
RBFOX1-206ENST00000535565 SKAP1Q86WV1 359 aa28.42■■■□□ 2.14
RBFOX1-206ENST00000535565 FLAD1Q8NFF5 587 aa28.42■■■□□ 2.14
RBFOX1-206ENST00000535565 SETDB2Q96T68 719 aa28.42■■■□□ 2.14
RBFOX1-206ENST00000535565 FAM177BA6PVY3 158 aa28.41■■■□□ 2.14
RBFOX1-206ENST00000535565 NTSR2O95665 410 aa28.41■■■□□ 2.14
RBFOX1-206ENST00000535565 BICDL1Q6ZP65 573 aa28.41■■■□□ 2.14
RBFOX1-206ENST00000535565 CCDC125Q86Z20 511 aa28.41■■■□□ 2.14
RBFOX1-206ENST00000535565 LNPKQ9C0E8 428 aa28.41■■■□□ 2.14
RBFOX1-206ENST00000535565 CHMP3Q9Y3E7 222 aa28.41■■■□□ 2.14
RBFOX1-206ENST00000535565 DDX60Q8IY21 1712 aaKnown RBP28.41■■■□□ 2.14
RBFOX1-206ENST00000535565 RAB11FIP3O75154 756 aa28.41■■■□□ 2.14
RBFOX1-206ENST00000535565 APBB1O00213 710 aa28.4■■■□□ 2.14
RBFOX1-206ENST00000535565 NYXQ9GZU5 481 aa28.4■■■□□ 2.14
RBFOX1-206ENST00000535565 NOP58Q9Y2X3 529 aaKnown RBP28.4■■■□□ 2.14
RBFOX1-206ENST00000535565 PDE8AO60658 829 aa28.39■■■□□ 2.14
RBFOX1-206ENST00000535565 SYNE4Q8N205 404 aa28.39■■■□□ 2.14
RBFOX1-206ENST00000535565 LRRCC1Q9C099 1032 aa28.39■■■□□ 2.14
RBFOX1-206ENST00000535565 OS9Q13438 667 aaPredicted RBP28.38■■■□□ 2.13
RBFOX1-206ENST00000535565 QSER1Q2KHR3 1735 aa28.38■■■□□ 2.13
RBFOX1-206ENST00000535565 CTSWP56202 376 aa28.37■■■□□ 2.13
RBFOX1-206ENST00000535565 CARMIL3Q8ND23 1372 aa28.36■■■□□ 2.13
RBFOX1-206ENST00000535565 GYS1P13807 737 aa28.36■■■□□ 2.13
RBFOX1-206ENST00000535565 ERC1Q8IUD2 1116 aa28.36■■■□□ 2.13
RBFOX1-206ENST00000535565 COPRSQ9NQ92 184 aa28.36■■■□□ 2.13
RBFOX1-206ENST00000535565 PA2G4Q9UQ80 394 aaKnown RBP28.36■■■□□ 2.13
RBFOX1-206ENST00000535565 CSF1RP07333 972 aa28.35■■■□□ 2.13
RBFOX1-206ENST00000535565 GTF2E1P29083 439 aaPredicted RBP28.35■■■□□ 2.13
RBFOX1-206ENST00000535565 RFX5P48382 616 aaPredicted RBP28.35■■■□□ 2.13
RBFOX1-206ENST00000535565 G3BP1Q13283 466 aaKnown RBP eCLIP28.35■■■□□ 2.13
RBFOX1-206ENST00000535565 NBPF5PQ86XG9 351 aaPredicted RBP28.35■■■□□ 2.13
RBFOX1-206ENST00000535565 STK32BQ9NY57 414 aa28.35■■■□□ 2.13
RBFOX1-206ENST00000535565 MSH5O43196 834 aa28.34■■■□□ 2.13
RBFOX1-206ENST00000535565 CCDC57Q2TAC2 916 aa28.34■■■□□ 2.13
RBFOX1-206ENST00000535565 DEFB132Q7Z7B7 95 aa28.34■■■□□ 2.13
RBFOX1-206ENST00000535565 NUTM1Q86Y26 1132 aa28.34■■■□□ 2.13
RBFOX1-206ENST00000535565 KIF1BPQ96EK5 621 aa28.34■■■□□ 2.13
RBFOX1-206ENST00000535565 CASZ1Q86V15 1759 aa28.34■■■□□ 2.13
RBFOX1-206ENST00000535565 PDE4AP27815 886 aa28.33■■■□□ 2.13
RBFOX1-206ENST00000535565 TPTE2Q6XPS3 522 aa28.33■■■□□ 2.13
RBFOX1-206ENST00000535565 SMARCA5O60264 1052 aaPredicted RBP28.33■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms