RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 RNF123Q5XPI4 1314 aa28.29■■■□□ 2.12
LRRK1-208ENST00000532029 IPO8O15397 1037 aaKnown RBP28.29■■■□□ 2.12
LRRK1-208ENST00000532029 NUTM1Q86Y26 1132 aa28.29■■■□□ 2.12
LRRK1-208ENST00000532029 FRAT1Q92837 279 aaPredicted RBP28.29■■■□□ 2.12
LRRK1-208ENST00000532029 SYT17Q9BSW7 474 aa28.29■■■□□ 2.12
LRRK1-208ENST00000532029 RCAN3Q9UKA8 241 aa28.29■■■□□ 2.12
LRRK1-208ENST00000532029 IGKV5-2P06315 115 aa28.28■■■□□ 2.12
LRRK1-208ENST00000532029 LINS1Q8NG48 757 aa28.28■■■□□ 2.12
LRRK1-208ENST00000532029 CWF19L2Q2TBE0 894 aaKnown RBP28.27■■■□□ 2.12
LRRK1-208ENST00000532029 ERFEQ4G0M1 354 aa28.27■■■□□ 2.12
LRRK1-208ENST00000532029 ARHGAP45Q92619 1136 aa28.27■■■□□ 2.12
LRRK1-208ENST00000532029 BRIP1Q9BX63 1249 aa28.27■■■□□ 2.12
LRRK1-208ENST00000532029 SH3TC1Q8TE82 1336 aa28.26■■■□□ 2.11
LRRK1-208ENST00000532029 NEURL1BA8MQ27 555 aa28.26■■■□□ 2.11
LRRK1-208ENST00000532029 PDE6BP35913 854 aa28.25■■■□□ 2.11
LRRK1-208ENST00000532029 TGFB2P61812 414 aa28.25■■■□□ 2.11
LRRK1-208ENST00000532029 BEND3Q5T5X7 828 aa28.25■■■□□ 2.11
LRRK1-208ENST00000532029 SRCIN1Q9C0H9 1055 aa28.25■■■□□ 2.11
LRRK1-208ENST00000532029 KIF13BQ9NQT8 1826 aa28.25■■■□□ 2.11
LRRK1-208ENST00000532029 ABCC12Q96J65 1359 aa28.24■■■□□ 2.11
LRRK1-208ENST00000532029 ZKSCAN2Q63HK3 967 aa28.23■■■□□ 2.11
LRRK1-208ENST00000532029 ZBTB38Q8NAP3 1195 aaPredicted RBP28.23■■■□□ 2.11
LRRK1-208ENST00000532029 NLGN2Q8NFZ4 835 aa28.23■■■□□ 2.11
LRRK1-208ENST00000532029 FAM89AQ96GI7 184 aa28.23■■■□□ 2.11
LRRK1-208ENST00000532029 PXDNLA1KZ92 1463 aa28.22■■■□□ 2.11
LRRK1-208ENST00000532029 ALDH1L1O75891 902 aa28.22■■■□□ 2.11
LRRK1-208ENST00000532029 ATF7IPQ6VMQ6 1270 aa28.22■■■□□ 2.11
LRRK1-208ENST00000532029 PDZRN3Q9UPQ7 1066 aa28.22■■■□□ 2.11
LRRK1-208ENST00000532029 PCCAP05165 728 aaPredicted RBP28.21■■■□□ 2.11
LRRK1-208ENST00000532029 GCKRQ14397 625 aa28.21■■■□□ 2.11
LRRK1-208ENST00000532029 RTL5Q5HYW3 569 aaPredicted RBP28.21■■■□□ 2.11
LRRK1-208ENST00000532029 C2CD5Q86YS7 1000 aa28.21■■■□□ 2.11
LRRK1-208ENST00000532029 RIC1Q4ADV7 1423 aa28.2■■■□□ 2.11
LRRK1-208ENST00000532029 SLC10A5Q5PT55 438 aa28.2■■■□□ 2.1
LRRK1-208ENST00000532029 A0A0G2JLW4 131 aa28.19■■■□□ 2.1
LRRK1-208ENST00000532029 H0YIN7 160 aa28.19■■■□□ 2.1
LRRK1-208ENST00000532029 HSP90B1P14625 803 aaKnown RBP28.19■■■□□ 2.1
LRRK1-208ENST00000532029 DPEP1P16444 411 aa28.19■■■□□ 2.1
LRRK1-208ENST00000532029 CHRNA5P30532 468 aa28.19■■■□□ 2.1
LRRK1-208ENST00000532029 SYNE4Q8N205 404 aa28.19■■■□□ 2.1
LRRK1-208ENST00000532029 ANKRD31Q8N7Z5 1873 aa28.19■■■□□ 2.1
LRRK1-208ENST00000532029 HCLS1P14317 486 aaPredicted RBP28.18■■■□□ 2.1
LRRK1-208ENST00000532029 TRIM27P14373 513 aa28.18■■■□□ 2.1
LRRK1-208ENST00000532029 CCT4P50991 539 aaKnown RBP28.18■■■□□ 2.1
LRRK1-208ENST00000532029 NLRP3Q96P20 1036 aa28.18■■■□□ 2.1
LRRK1-208ENST00000532029 IRS4O14654 1257 aaPredicted RBP28.17■■■□□ 2.1
LRRK1-208ENST00000532029 JARID2Q92833 1246 aaPredicted RBP28.17■■■□□ 2.1
LRRK1-208ENST00000532029 H7C1W4 665 aa28.16■■■□□ 2.1
LRRK1-208ENST00000532029 UBE3BQ7Z3V4 1068 aa28.16■■■□□ 2.1
LRRK1-208ENST00000532029 C9orf78Q9NZ63 289 aaPredicted RBP28.16■■■□□ 2.1
LRRK1-208ENST00000532029 ABCC4O15439 1325 aa28.16■■■□□ 2.1
LRRK1-208ENST00000532029 CDHR2Q9BYE9 1310 aa28.16■■■□□ 2.1
LRRK1-208ENST00000532029 CLUAP1Q96AJ1 413 aa28.15■■■□□ 2.1
LRRK1-208ENST00000532029 TNRC6CQ9HCJ0 1690 aaKnown RBP28.15■■■□□ 2.1
LRRK1-208ENST00000532029 KIAA1551Q9HCM1 1747 aa28.15■■■□□ 2.1
LRRK1-208ENST00000532029 N4BP2Q86UW6 1770 aaPredicted RBP28.14■■■□□ 2.1
LRRK1-208ENST00000532029 KLRG2A4D1S0 409 aaPredicted RBP28.14■■■□□ 2.1
LRRK1-208ENST00000532029 FTSJ3Q8IY81 847 aaKnown RBP28.14■■■□□ 2.1
LRRK1-208ENST00000532029 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.14■■■□□ 2.1
LRRK1-208ENST00000532029 GRM8O00222 908 aa28.13■■■□□ 2.09
LRRK1-208ENST00000532029 SRGNP10124 158 aa28.13■■■□□ 2.09
LRRK1-208ENST00000532029 ZNF622Q969S3 477 aaKnown RBP eCLIP28.13■■■□□ 2.09
LRRK1-208ENST00000532029 TNNQ9UQP3 1299 aa28.13■■■□□ 2.09
LRRK1-208ENST00000532029 DZIP1LQ8IYY4 767 aaKnown RBP28.12■■■□□ 2.09
LRRK1-208ENST00000532029 RPGRQ92834 1020 aaKnown RBP28.12■■■□□ 2.09
LRRK1-208ENST00000532029 MASTLQ96GX5 879 aa28.12■■■□□ 2.09
LRRK1-208ENST00000532029 PIM2Q9P1W9 311 aa28.12■■■□□ 2.09
LRRK1-208ENST00000532029 PDE8AO60658 829 aa28.11■■■□□ 2.09
LRRK1-208ENST00000532029 MS4A1P11836 297 aa28.11■■■□□ 2.09
LRRK1-208ENST00000532029 NPR1P16066 1061 aa28.11■■■□□ 2.09
LRRK1-208ENST00000532029 KCNA3P22001 575 aa28.11■■■□□ 2.09
LRRK1-208ENST00000532029 INTS3Q68E01 1043 aaKnown RBP28.11■■■□□ 2.09
LRRK1-208ENST00000532029 STYK1Q6J9G0 422 aa28.11■■■□□ 2.09
LRRK1-208ENST00000532029 C3orf67Q6ZVT6 689 aa28.11■■■□□ 2.09
LRRK1-208ENST00000532029 COL11A2P13942 1736 aaPredicted RBP28.1■■■□□ 2.09
LRRK1-208ENST00000532029 DDX60Q8IY21 1712 aaKnown RBP28.1■■■□□ 2.09
LRRK1-208ENST00000532029 LAMB2P55268 1798 aa28.1■■■□□ 2.09
LRRK1-208ENST00000532029 CRY2Q49AN0 593 aa28.1■■■□□ 2.09
LRRK1-208ENST00000532029 WWC3Q9ULE0 1092 aa28.1■■■□□ 2.09
LRRK1-208ENST00000532029 CASP7P55210 303 aa28.09■■■□□ 2.09
LRRK1-208ENST00000532029 PELP1Q8IZL8 1130 aaKnown RBP28.09■■■□□ 2.09
LRRK1-208ENST00000532029 TTLL6Q8N841 843 aa28.08■■■□□ 2.09
LRRK1-208ENST00000532029 CNKSR1Q969H4 720 aa28.08■■■□□ 2.09
LRRK1-208ENST00000532029 RBM17Q96I25 401 aaKnown RBP28.08■■■□□ 2.09
LRRK1-208ENST00000532029 DLEC1Q9Y238 1755 aa28.08■■■□□ 2.09
LRRK1-208ENST00000532029 PLIN1O60240 522 aa28.07■■■□□ 2.08
LRRK1-208ENST00000532029 SF3B3Q15393 1217 aaKnown RBP28.07■■■□□ 2.08
LRRK1-208ENST00000532029 DALRD3Q5D0E6 543 aaKnown RBP28.07■■■□□ 2.08
LRRK1-208ENST00000532029 TMEM57Q8N5G2 664 aa28.07■■■□□ 2.08
LRRK1-208ENST00000532029 DCAF8L1A6NGE4 600 aa28.06■■■□□ 2.08
LRRK1-208ENST00000532029 ALDH1B1P30837 517 aa28.06■■■□□ 2.08
LRRK1-208ENST00000532029 PLA2G12BQ9BX93 195 aa28.06■■■□□ 2.08
LRRK1-208ENST00000532029 USP44Q9H0E7 712 aa28.06■■■□□ 2.08
LRRK1-208ENST00000532029 BCS1LQ9Y276 419 aa28.06■■■□□ 2.08
LRRK1-208ENST00000532029 UTYO14607 1347 aa28.06■■■□□ 2.08
LRRK1-208ENST00000532029 NBPF7P0C2Y1 421 aaPredicted RBP28.05■■■□□ 2.08
LRRK1-208ENST00000532029 HOXA10P31260 410 aaPredicted RBP28.05■■■□□ 2.08
LRRK1-208ENST00000532029 GPR162Q16538 588 aa28.05■■■□□ 2.08
LRRK1-208ENST00000532029 CCDC152Q4G0S7 254 aa28.05■■■□□ 2.08
LRRK1-208ENST00000532029 DDX46Q7L014 1031 aaKnown RBP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms