RNA–Protein interactions for RNA: ENST00000531687.1

THUMPD2-209, Transcript of THUMP domain containing 2, humanhuman

TSL 3

Gene THUMPD2, Length 230 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-209ENST00000531687 ELL2O00472 640 aaPredicted RBP21.71■■□□□ 1.07
THUMPD2-209ENST00000531687 TCIRG1Q13488 830 aa21.71■■□□□ 1.07
THUMPD2-209ENST00000531687 C9orf131Q5VYM1 1079 aa21.71■■□□□ 1.07
THUMPD2-209ENST00000531687 NFKBIEO00221 500 aa21.7■■□□□ 1.06
THUMPD2-209ENST00000531687 RASSF7Q02833 373 aa21.7■■□□□ 1.06
THUMPD2-209ENST00000531687 SOGA3Q5TF21 947 aa21.7■■□□□ 1.06
THUMPD2-209ENST00000531687 ANKRD13DQ6ZTN6 518 aa21.7■■□□□ 1.06
THUMPD2-209ENST00000531687 UTP14AQ9BVJ6 771 aaKnown RBP21.7■■□□□ 1.06
THUMPD2-209ENST00000531687 GPBP1L1Q9HC44 474 aaPredicted RBP21.7■■□□□ 1.06
THUMPD2-209ENST00000531687 RNF181Q9P0P0 153 aa21.7■■□□□ 1.06
THUMPD2-209ENST00000531687 FANCIQ9NVI1 1328 aa21.7■■□□□ 1.06
THUMPD2-209ENST00000531687 ZC3H4Q9UPT8 1303 aaKnown RBP21.7■■□□□ 1.06
THUMPD2-209ENST00000531687 DICER1Q9UPY3 1922 aaKnown RBP21.7■■□□□ 1.06
THUMPD2-209ENST00000531687 DDX60Q8IY21 1712 aaKnown RBP21.69■■□□□ 1.06
THUMPD2-209ENST00000531687 C21orf2O43822 256 aa21.69■■□□□ 1.06
THUMPD2-209ENST00000531687 CCDC30Q5VVM6 783 aa21.69■■□□□ 1.06
THUMPD2-209ENST00000531687 NLRP10Q86W26 655 aa21.69■■□□□ 1.06
THUMPD2-209ENST00000531687 TSPYL6Q8N831 410 aa21.69■■□□□ 1.06
THUMPD2-209ENST00000531687 LMNB1P20700 586 aa21.68■■□□□ 1.06
THUMPD2-209ENST00000531687 LTBP3Q9NS15 1303 aa21.68■■□□□ 1.06
THUMPD2-209ENST00000531687 ALDH1B1P30837 517 aa21.67■■□□□ 1.06
THUMPD2-209ENST00000531687 GOLGA2Q08379 1002 aa21.67■■□□□ 1.06
THUMPD2-209ENST00000531687 MYH16Q9H6N6 1097 aa21.67■■□□□ 1.06
THUMPD2-209ENST00000531687 CACNA1FO60840 1977 aa21.67■■□□□ 1.06
THUMPD2-209ENST00000531687 TWISTNBQ3B726 338 aaPredicted RBP21.66■■□□□ 1.06
THUMPD2-209ENST00000531687 ZNF526Q8TF50 670 aaPredicted RBP21.66■■□□□ 1.06
THUMPD2-209ENST00000531687 ISCA1Q9BUE6 129 aa21.66■■□□□ 1.06
THUMPD2-209ENST00000531687 HOXA10P31260 410 aaPredicted RBP21.65■■□□□ 1.06
THUMPD2-209ENST00000531687 PRELPP51888 382 aa21.65■■□□□ 1.06
THUMPD2-209ENST00000531687 SLC10A5Q5PT55 438 aa21.65■■□□□ 1.06
THUMPD2-209ENST00000531687 C7orf43Q8WVR3 580 aa21.65■■□□□ 1.06
THUMPD2-209ENST00000531687 RPGRQ92834 1020 aaKnown RBP21.65■■□□□ 1.06
THUMPD2-209ENST00000531687 PHAXQ9H814 394 aaKnown RBP21.65■■□□□ 1.06
THUMPD2-209ENST00000531687 ZNF219Q9P2Y4 722 aaPredicted RBP21.65■■□□□ 1.06
THUMPD2-209ENST00000531687 SH3TC1Q8TE82 1336 aa21.64■■□□□ 1.05
THUMPD2-209ENST00000531687 CCDC93Q567U6 631 aa21.64■■□□□ 1.05
THUMPD2-209ENST00000531687 STK31Q9BXU1 1019 aa21.64■■□□□ 1.05
THUMPD2-209ENST00000531687 TAOK3Q9H2K8 898 aa21.64■■□□□ 1.05
THUMPD2-209ENST00000531687 TRMT112Q9UI30 125 aaKnown RBP21.64■■□□□ 1.05
THUMPD2-209ENST00000531687 SNED1Q8TER0 1413 aa21.63■■□□□ 1.05
THUMPD2-209ENST00000531687 DDX58O95786 925 aaKnown RBP21.63■■□□□ 1.05
THUMPD2-209ENST00000531687 TRIM28Q13263 835 aaKnown RBP21.63■■□□□ 1.05
THUMPD2-209ENST00000531687 RIC3Q7Z5B4 369 aa21.63■■□□□ 1.05
THUMPD2-209ENST00000531687 NLRP3Q96P20 1036 aa21.63■■□□□ 1.05
THUMPD2-209ENST00000531687 ZNF521Q96K83 1311 aa21.62■■□□□ 1.05
THUMPD2-209ENST00000531687 C3orf67Q6ZVT6 689 aa21.62■■□□□ 1.05
THUMPD2-209ENST00000531687 RBM17Q96I25 401 aaKnown RBP21.62■■□□□ 1.05
THUMPD2-209ENST00000531687 CRAMP1Q96RY5 1269 aa21.62■■□□□ 1.05
THUMPD2-209ENST00000531687 KDM2BQ8NHM5 1336 aa21.6■■□□□ 1.05
THUMPD2-209ENST00000531687 ATP5J2-PTCD1G3V325 749 aa21.6■■□□□ 1.05
THUMPD2-209ENST00000531687 C1QTNF8P60827 252 aa21.6■■□□□ 1.05
THUMPD2-209ENST00000531687 RTKN2Q8IZC4 609 aa21.59■■□□□ 1.05
THUMPD2-209ENST00000531687 SPINK5Q9NQ38 1064 aaPredicted RBP21.59■■□□□ 1.05
THUMPD2-209ENST00000531687 LRRC37AA6NMS7 1700 aa21.58■■□□□ 1.05
THUMPD2-209ENST00000531687 E9PSI1 815 aa21.58■■□□□ 1.05
THUMPD2-209ENST00000531687 HCLS1P14317 486 aaPredicted RBP21.58■■□□□ 1.05
THUMPD2-209ENST00000531687 FKBP4Q02790 459 aaKnown RBP eCLIP21.58■■□□□ 1.05
THUMPD2-209ENST00000531687 EXOSC9Q06265 439 aaKnown RBP21.58■■□□□ 1.05
THUMPD2-209ENST00000531687 CC2D2BQ6DHV5 1058 aa21.58■■□□□ 1.05
THUMPD2-209ENST00000531687 SYNE4Q8N205 404 aa21.58■■□□□ 1.05
THUMPD2-209ENST00000531687 KIF3CO14782 793 aa21.57■■□□□ 1.04
THUMPD2-209ENST00000531687 PPEF1O14829 653 aaPredicted RBP21.57■■□□□ 1.04
THUMPD2-209ENST00000531687 MYD88Q99836 296 aa21.57■■□□□ 1.04
THUMPD2-209ENST00000531687 METTL22Q9BUU2 404 aaPredicted RBP21.57■■□□□ 1.04
THUMPD2-209ENST00000531687 ABCC4O15439 1325 aa21.56■■□□□ 1.04
THUMPD2-209ENST00000531687 WDR90Q96KV7 1748 aa21.56■■□□□ 1.04
THUMPD2-209ENST00000531687 VAMP4O75379 141 aa21.56■■□□□ 1.04
THUMPD2-209ENST00000531687 GRIPAP1Q4V328 841 aa21.56■■□□□ 1.04
THUMPD2-209ENST00000531687 OLFM4Q6UX06 510 aa21.56■■□□□ 1.04
THUMPD2-209ENST00000531687 KSR2Q6VAB6 950 aa21.56■■□□□ 1.04
THUMPD2-209ENST00000531687 CCDC191Q8NCU4 936 aa21.56■■□□□ 1.04
THUMPD2-209ENST00000531687 MAP3K2Q9Y2U5 619 aa21.56■■□□□ 1.04
THUMPD2-209ENST00000531687 TCERG1O14776 1098 aaKnown RBP21.55■■□□□ 1.04
THUMPD2-209ENST00000531687 FAM89AQ96GI7 184 aa21.55■■□□□ 1.04
THUMPD2-209ENST00000531687 PSMD1Q99460 953 aa21.55■■□□□ 1.04
THUMPD2-209ENST00000531687 NMRK2Q9NPI5 230 aa21.55■■□□□ 1.04
THUMPD2-209ENST00000531687 PI4KAP2A4QPH2 592 aa21.54■■□□□ 1.04
THUMPD2-209ENST00000531687 SLC4A2P04920 1241 aa21.54■■□□□ 1.04
THUMPD2-209ENST00000531687 PI4KAP1Q8N8J0 262 aa21.54■■□□□ 1.04
THUMPD2-209ENST00000531687 ZBTB38Q8NAP3 1195 aaPredicted RBP21.54■■□□□ 1.04
THUMPD2-209ENST00000531687 GLTPD2A6NH11 291 aa21.53■■□□□ 1.04
THUMPD2-209ENST00000531687 HSP90B1P14625 803 aaKnown RBP21.53■■□□□ 1.04
THUMPD2-209ENST00000531687 SLFN5Q08AF3 891 aa21.53■■□□□ 1.04
THUMPD2-209ENST00000531687 FLIIQ13045 1269 aa21.53■■□□□ 1.04
THUMPD2-209ENST00000531687 G2E3Q7L622 706 aa21.53■■□□□ 1.04
THUMPD2-209ENST00000531687 ZNF428Q96B54 188 aa21.53■■□□□ 1.04
THUMPD2-209ENST00000531687 CWC25Q9NXE8 425 aaPredicted RBP21.53■■□□□ 1.04
THUMPD2-209ENST00000531687 TAF1P21675 1872 aa21.53■■□□□ 1.04
THUMPD2-209ENST00000531687 IRS4O14654 1257 aaPredicted RBP21.52■■□□□ 1.04
THUMPD2-209ENST00000531687 PCCAP05165 728 aaPredicted RBP21.52■■□□□ 1.04
THUMPD2-209ENST00000531687 HNRNPUQ00839 825 aaKnown RBP eCLIP21.52■■□□□ 1.04
THUMPD2-209ENST00000531687 NEXNQ0ZGT2 675 aa21.52■■□□□ 1.04
THUMPD2-209ENST00000531687 SF3B3Q15393 1217 aaKnown RBP21.52■■□□□ 1.04
THUMPD2-209ENST00000531687 DDX46Q7L014 1031 aaKnown RBP21.52■■□□□ 1.04
THUMPD2-209ENST00000531687 ATP6V0A2Q9Y487 856 aa21.52■■□□□ 1.04
THUMPD2-209ENST00000531687 MYH3P11055 1940 aa21.52■■□□□ 1.04
THUMPD2-209ENST00000531687 GRAPQ13588 217 aa21.51■■□□□ 1.03
THUMPD2-209ENST00000531687 GRAPLQ8TC17 118 aaPredicted RBP21.51■■□□□ 1.03
THUMPD2-209ENST00000531687 BBOX1O75936 387 aa21.5■■□□□ 1.03
THUMPD2-209ENST00000531687 IARSP41252 1262 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms