RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 ZNF771Q7L3S4 317 aaPredicted RBP18■□□□□ 0.47
USP35-203ENST00000529308 CCDC43Q96MW1 224 aaKnown RBP18■□□□□ 0.47
USP35-203ENST00000529308 OFD1O75665 1012 aa17.99■□□□□ 0.47
USP35-203ENST00000529308 CFAP100Q494V2 611 aa17.99■□□□□ 0.47
USP35-203ENST00000529308 FAM173BQ6P4H8 233 aa17.99■□□□□ 0.47
USP35-203ENST00000529308 DDX21Q9NR30 783 aaKnown RBP eCLIP17.99■□□□□ 0.47
USP35-203ENST00000529308 FSIP1Q8NA03 581 aa17.99■□□□□ 0.47
USP35-203ENST00000529308 SAMD9LQ8IVG5 1584 aa17.99■□□□□ 0.47
USP35-203ENST00000529308 SLC12A7Q9Y666 1083 aa17.99■□□□□ 0.47
USP35-203ENST00000529308 ERVK-7P63135 1459 aa17.99■□□□□ 0.47
USP35-203ENST00000529308 ZSCAN22P10073 491 aaPredicted RBP17.99■□□□□ 0.47
USP35-203ENST00000529308 PRIM1P49642 420 aaKnown RBP17.99■□□□□ 0.47
USP35-203ENST00000529308 ATP2B3Q16720 1220 aa17.99■□□□□ 0.47
USP35-203ENST00000529308 CDK5RAP3Q96JB5 506 aa17.99■□□□□ 0.47
USP35-203ENST00000529308 PLEKHF1Q96S99 279 aa17.99■□□□□ 0.47
USP35-203ENST00000529308 ZNF521Q96K83 1311 aa17.98■□□□□ 0.47
USP35-203ENST00000529308 UQCRHLA0A096LP55 91 aa17.98■□□□□ 0.47
USP35-203ENST00000529308 UQCRHP07919 91 aa17.98■□□□□ 0.47
USP35-203ENST00000529308 EDC3Q96F86 508 aaKnown RBP17.98■□□□□ 0.47
USP35-203ENST00000529308 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
USP35-203ENST00000529308 ZNF496Q96IT1 587 aaPredicted RBP17.98■□□□□ 0.47
USP35-203ENST00000529308 SLC5A1P13866 664 aa17.98■□□□□ 0.47
USP35-203ENST00000529308 SLC9C2Q5TAH2 1124 aa17.98■□□□□ 0.47
USP35-203ENST00000529308 CCDC129Q6ZRS4 1044 aa17.98■□□□□ 0.47
USP35-203ENST00000529308 MKNK2Q9HBH9 465 aa17.98■□□□□ 0.47
USP35-203ENST00000529308 KLF18A0A0U1RQI7 1052 aa17.97■□□□□ 0.47
USP35-203ENST00000529308 PHF23Q9BUL5 403 aaPredicted RBP17.97■□□□□ 0.47
USP35-203ENST00000529308 Q6ZUG5 572 aa17.97■□□□□ 0.47
USP35-203ENST00000529308 TRMT2AQ8IZ69 625 aaKnown RBP17.97■□□□□ 0.47
USP35-203ENST00000529308 ZNF594Q96JF6 807 aaPredicted RBP17.97■□□□□ 0.47
USP35-203ENST00000529308 ABCA8O94911 1581 aa17.97■□□□□ 0.47
USP35-203ENST00000529308 GOLGA8AA7E2F4 631 aa17.96■□□□□ 0.47
USP35-203ENST00000529308 HMGB1P09429 215 aaKnown RBP17.96■□□□□ 0.47
USP35-203ENST00000529308 RAB3GAP1Q15042 981 aa17.96■□□□□ 0.47
USP35-203ENST00000529308 HSP90AA4PQ58FG1 418 aa17.96■□□□□ 0.47
USP35-203ENST00000529308 CHAMP1Q96JM3 812 aa17.96■□□□□ 0.47
USP35-203ENST00000529308 PLEKHG3A1L390 1219 aa17.96■□□□□ 0.47
USP35-203ENST00000529308 ZNF165P49910 485 aa17.96■□□□□ 0.47
USP35-203ENST00000529308 HMGN5P82970 282 aaKnown RBP17.96■□□□□ 0.47
USP35-203ENST00000529308 FILIP1LQ4L180 1135 aa17.96■□□□□ 0.47
USP35-203ENST00000529308 FAM227BQ96M60 508 aa17.96■□□□□ 0.47
USP35-203ENST00000529308 SBNO2Q9Y2G9 1366 aa17.96■□□□□ 0.47
USP35-203ENST00000529308 TMEM67Q5HYA8 995 aa17.96■□□□□ 0.47
USP35-203ENST00000529308 DZIP1Q86YF9 867 aaKnown RBP17.96■□□□□ 0.47
USP35-203ENST00000529308 ADCY5O95622 1261 aa17.96■□□□□ 0.46
USP35-203ENST00000529308 DBNDD2Q9BQY9 259 aa17.96■□□□□ 0.46
USP35-203ENST00000529308 USP44Q9H0E7 712 aa17.96■□□□□ 0.46
USP35-203ENST00000529308 TRMT1Q9NXH9 659 aaKnown RBP17.96■□□□□ 0.46
USP35-203ENST00000529308 IL2RBP14784 551 aa17.95■□□□□ 0.46
USP35-203ENST00000529308 RXRAP19793 462 aa17.95■□□□□ 0.46
USP35-203ENST00000529308 MCMDC2Q4G0Z9 681 aa17.95■□□□□ 0.46
USP35-203ENST00000529308 JAG2Q9Y219 1238 aa17.95■□□□□ 0.46
USP35-203ENST00000529308 DCAF5Q96JK2 942 aa17.95■□□□□ 0.46
USP35-203ENST00000529308 SBNO1A3KN83 1393 aa17.95■□□□□ 0.46
USP35-203ENST00000529308 GSPT1P15170 499 aaKnown RBP17.95■□□□□ 0.46
USP35-203ENST00000529308 SOGA3Q5TF21 947 aa17.95■□□□□ 0.46
USP35-203ENST00000529308 CCDC112Q8NEF3 446 aa17.95■□□□□ 0.46
USP35-203ENST00000529308 SIRT1Q96EB6 747 aa17.95■□□□□ 0.46
USP35-203ENST00000529308 ERCC6L2Q5T890 1561 aa17.95■□□□□ 0.46
USP35-203ENST00000529308 TMEM2Q9UHN6 1383 aa17.95■□□□□ 0.46
USP35-203ENST00000529308 KRT18P05783 430 aaKnown RBP17.94■□□□□ 0.46
USP35-203ENST00000529308 ATP6V1AP38606 617 aa17.94■□□□□ 0.46
USP35-203ENST00000529308 UBE2HP62256 183 aa17.94■□□□□ 0.46
USP35-203ENST00000529308 CREB3L3Q68CJ9 461 aa17.94■□□□□ 0.46
USP35-203ENST00000529308 TTC37Q6PGP7 1564 aa17.94■□□□□ 0.46
USP35-203ENST00000529308 DACT1Q9NYF0 836 aa17.94■□□□□ 0.46
USP35-203ENST00000529308 IARSP41252 1262 aaKnown RBP17.94■□□□□ 0.46
USP35-203ENST00000529308 EPS15P42566 896 aa17.94■□□□□ 0.46
USP35-203ENST00000529308 RBM25P49756 843 aaKnown RBP17.94■□□□□ 0.46
USP35-203ENST00000529308 ANAPC15P60006 121 aa17.94■□□□□ 0.46
USP35-203ENST00000529308 PAG1Q9NWQ8 432 aa17.93■□□□□ 0.46
USP35-203ENST00000529308 KDM5CP41229 1560 aa17.93■□□□□ 0.46
USP35-203ENST00000529308 IL15P40933 162 aaPredicted RBP17.93■□□□□ 0.46
USP35-203ENST00000529308 IQCA1Q86XH1 822 aa17.93■□□□□ 0.46
USP35-203ENST00000529308 SLC26A6Q9BXS9 759 aa17.93■□□□□ 0.46
USP35-203ENST00000529308 NOL7Q9UMY1 257 aaKnown RBP17.93■□□□□ 0.46
USP35-203ENST00000529308 C6orf229H3BNL8 230 aa17.93■□□□□ 0.46
USP35-203ENST00000529308 SUCLG2Q96I99 432 aa17.93■□□□□ 0.46
USP35-203ENST00000529308 TEX13AQ9BXU3 409 aaPredicted RBP17.93■□□□□ 0.46
USP35-203ENST00000529308 NIP7Q9Y221 180 aaKnown RBP eCLIP17.93■□□□□ 0.46
USP35-203ENST00000529308 SYT1P21579 422 aa17.92■□□□□ 0.46
USP35-203ENST00000529308 APOBRQ0VD83 1088 aa17.92■□□□□ 0.46
USP35-203ENST00000529308 BTG4Q9NY30 223 aa17.92■□□□□ 0.46
USP35-203ENST00000529308 TNNT3P45378 269 aaPredicted RBP17.92■□□□□ 0.46
USP35-203ENST00000529308 EIF4A1P60842 406 aaKnown RBP17.92■□□□□ 0.46
USP35-203ENST00000529308 PPFIBP1Q86W92 1011 aa17.92■□□□□ 0.46
USP35-203ENST00000529308 NCOA7Q8NI08 942 aa17.92■□□□□ 0.46
USP35-203ENST00000529308 VAT1LQ9HCJ6 419 aa17.92■□□□□ 0.46
USP35-203ENST00000529308 CTCFLQ8NI51 663 aaPredicted RBP17.92■□□□□ 0.46
USP35-203ENST00000529308 C16orf45Q96MC5 204 aaPredicted RBP17.92■□□□□ 0.46
USP35-203ENST00000529308 MPHOSPH10O00566 681 aaKnown RBP17.91■□□□□ 0.46
USP35-203ENST00000529308 METAP2P50579 478 aaKnown RBP eCLIP17.91■□□□□ 0.46
USP35-203ENST00000529308 CCAR1Q8IX12 1150 aaKnown RBP17.91■□□□□ 0.46
USP35-203ENST00000529308 PRR36Q9H6K5 1346 aa17.91■□□□□ 0.46
USP35-203ENST00000529308 MARCKSP29966 332 aaPredicted RBP17.91■□□□□ 0.46
USP35-203ENST00000529308 MIGA1Q8NAN2 632 aa17.91■□□□□ 0.46
USP35-203ENST00000529308 HMG20BQ9P0W2 317 aa17.91■□□□□ 0.46
USP35-203ENST00000529308 MCM5P33992 734 aa17.9■□□□□ 0.46
USP35-203ENST00000529308 ARHGEF5Q12774 1597 aa17.9■□□□□ 0.46
USP35-203ENST00000529308 CPLX3Q8WVH0 158 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms