RNA–Protein interactions for RNA: ENST00000528847.1

RPS3-211, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-211ENST00000528847 NBPF10Q6P3W6 841 aaKnown RBP13.65□□□□□ -0.22
RPS3-211ENST00000528847 NBPF15Q8N660 670 aa13.65□□□□□ -0.22
RPS3-211ENST00000528847 CFAP44Q96MT7 982 aa13.65□□□□□ -0.22
RPS3-211ENST00000528847 PSMD1Q99460 953 aa13.65□□□□□ -0.22
RPS3-211ENST00000528847 TIMELESSQ9UNS1 1208 aa13.65□□□□□ -0.22
RPS3-211ENST00000528847 TLL2Q9Y6L7 1015 aa13.65□□□□□ -0.22
RPS3-211ENST00000528847 CEMIPQ8WUJ3 1361 aa13.64□□□□□ -0.23
RPS3-211ENST00000528847 EIF6P56537 245 aaKnown RBP13.64□□□□□ -0.23
RPS3-211ENST00000528847 LMOD1P29536 600 aaPredicted RBP13.63□□□□□ -0.23
RPS3-211ENST00000528847 MAP2K2P36507 400 aa13.63□□□□□ -0.23
RPS3-211ENST00000528847 GAS2L2Q8NHY3 880 aa13.63□□□□□ -0.23
RPS3-211ENST00000528847 PHACTR3Q96KR7 559 aa13.63□□□□□ -0.23
RPS3-211ENST00000528847 ZNF652Q9Y2D9 606 aa13.63□□□□□ -0.23
RPS3-211ENST00000528847 U2SURPO15042 1029 aaKnown RBP13.62□□□□□ -0.23
RPS3-211ENST00000528847 CC2D1BQ5T0F9 858 aaKnown RBP13.62□□□□□ -0.23
RPS3-211ENST00000528847 USP50Q70EL3 339 aaPredicted RBP13.62□□□□□ -0.23
RPS3-211ENST00000528847 SAPCD2Q86UD0 394 aa13.62□□□□□ -0.23
RPS3-211ENST00000528847 NUP98P52948 1817 aa13.62□□□□□ -0.23
RPS3-211ENST00000528847 COL3A1P02461 1466 aaPredicted RBP13.61□□□□□ -0.23
RPS3-211ENST00000528847 CRY2Q49AN0 593 aa13.61□□□□□ -0.23
RPS3-211ENST00000528847 NUTM1Q86Y26 1132 aa13.61□□□□□ -0.23
RPS3-211ENST00000528847 LARGE2Q8N3Y3 721 aa13.61□□□□□ -0.23
RPS3-211ENST00000528847 ABCC12Q96J65 1359 aa13.6□□□□□ -0.23
RPS3-211ENST00000528847 TCERG1O14776 1098 aaKnown RBP13.6□□□□□ -0.23
RPS3-211ENST00000528847 PER1O15534 1290 aaPredicted RBP13.6□□□□□ -0.23
RPS3-211ENST00000528847 SNRPA1P09661 255 aaKnown RBP13.6□□□□□ -0.23
RPS3-211ENST00000528847 GTF2E1P29083 439 aaPredicted RBP13.6□□□□□ -0.23
RPS3-211ENST00000528847 DGKZQ13574 1117 aa13.6□□□□□ -0.23
RPS3-211ENST00000528847 ZIC5Q96T25 663 aa13.6□□□□□ -0.23
RPS3-211ENST00000528847 CELF2O95319 508 aaKnown RBP13.59□□□□□ -0.23
RPS3-211ENST00000528847 CIAPIN1Q6FI81 312 aa13.59□□□□□ -0.23
RPS3-211ENST00000528847 GLIS2Q9BZE0 524 aaPredicted RBP13.59□□□□□ -0.23
RPS3-211ENST00000528847 RGL2O15211 777 aa13.58□□□□□ -0.24
RPS3-211ENST00000528847 CNGB1Q14028 1251 aaPredicted RBP13.58□□□□□ -0.24
RPS3-211ENST00000528847 CC2D2BQ6DHV5 1058 aa13.58□□□□□ -0.24
RPS3-211ENST00000528847 MCM10Q7L590 875 aa13.58□□□□□ -0.24
RPS3-211ENST00000528847 ADARB2Q9NS39 739 aaKnown RBP13.58□□□□□ -0.24
RPS3-211ENST00000528847 GPRC5DQ9NZD1 345 aa13.58□□□□□ -0.24
RPS3-211ENST00000528847 POLR2AP24928 1970 aaKnown RBP13.58□□□□□ -0.24
RPS3-211ENST00000528847 CA12O43570 354 aa13.57□□□□□ -0.24
RPS3-211ENST00000528847 HOXA10P31260 410 aaPredicted RBP13.57□□□□□ -0.24
RPS3-211ENST00000528847 BRPF1P55201 1214 aaPredicted RBP13.57□□□□□ -0.24
RPS3-211ENST00000528847 NGEFQ8N5V2 710 aa13.57□□□□□ -0.24
RPS3-211ENST00000528847 PRKAR2BP31323 418 aa13.56□□□□□ -0.24
RPS3-211ENST00000528847 HIRAP54198 1017 aaPredicted RBP13.56□□□□□ -0.24
RPS3-211ENST00000528847 CXCL9Q07325 125 aa13.56□□□□□ -0.24
RPS3-211ENST00000528847 DCTN1Q14203 1278 aa13.56□□□□□ -0.24
RPS3-211ENST00000528847 AOC3Q16853 763 aa13.56□□□□□ -0.24
RPS3-211ENST00000528847 DLK2Q6UY11 383 aa13.56□□□□□ -0.24
RPS3-211ENST00000528847 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
RPS3-211ENST00000528847 NIM1KQ8IY84 436 aa13.56□□□□□ -0.24
RPS3-211ENST00000528847 RPGRQ92834 1020 aaKnown RBP13.56□□□□□ -0.24
RPS3-211ENST00000528847 HHIPL1Q96JK4 782 aa13.56□□□□□ -0.24
RPS3-211ENST00000528847 ZNF408Q9H9D4 720 aa13.56□□□□□ -0.24
RPS3-211ENST00000528847 PGAP2Q9UHJ9 254 aa13.56□□□□□ -0.24
RPS3-211ENST00000528847 PPIP5K2O43314 1243 aa13.55□□□□□ -0.24
RPS3-211ENST00000528847 GMPSP49915 693 aaPredicted RBP13.55□□□□□ -0.24
RPS3-211ENST00000528847 CRAMP1Q96RY5 1269 aa13.55□□□□□ -0.24
RPS3-211ENST00000528847 NYXQ9GZU5 481 aa13.55□□□□□ -0.24
RPS3-211ENST00000528847 RSPH6AQ9H0K4 717 aa13.55□□□□□ -0.24
RPS3-211ENST00000528847 MIS18AQ9NYP9 233 aa13.55□□□□□ -0.24
RPS3-211ENST00000528847 KIF7Q2M1P5 1343 aa13.55□□□□□ -0.24
RPS3-211ENST00000528847 NPC1L1Q9UHC9 1359 aa13.55□□□□□ -0.24
RPS3-211ENST00000528847 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
RPS3-211ENST00000528847 GPTP24298 496 aa13.54□□□□□ -0.24
RPS3-211ENST00000528847 GRIPAP1Q4V328 841 aa13.54□□□□□ -0.24
RPS3-211ENST00000528847 SUSD4Q5VX71 490 aa13.54□□□□□ -0.24
RPS3-211ENST00000528847 TTLL7Q6ZT98 887 aa13.54□□□□□ -0.24
RPS3-211ENST00000528847 UBN2Q6ZU65 1347 aa13.54□□□□□ -0.24
RPS3-211ENST00000528847 SHTN1A0MZ66 631 aa13.53□□□□□ -0.24
RPS3-211ENST00000528847 SOX10P56693 466 aa13.53□□□□□ -0.24
RPS3-211ENST00000528847 RBM17Q96I25 401 aaKnown RBP13.53□□□□□ -0.24
RPS3-211ENST00000528847 RIC1Q4ADV7 1423 aa13.53□□□□□ -0.24
RPS3-211ENST00000528847 ERVV-1B6SEH8 477 aa13.52□□□□□ -0.25
RPS3-211ENST00000528847 TRPM4Q8TD43 1214 aa13.52□□□□□ -0.25
RPS3-211ENST00000528847 ZNRF3Q9ULT6 936 aa13.52□□□□□ -0.25
RPS3-211ENST00000528847 RRP7AQ9Y3A4 280 aaKnown RBP13.52□□□□□ -0.25
RPS3-211ENST00000528847 MAP3K15Q6ZN16 1313 aa13.52□□□□□ -0.25
RPS3-211ENST00000528847 LAMB4A4D0S4 1761 aa13.52□□□□□ -0.25
RPS3-211ENST00000528847 TAF1P21675 1872 aa13.51□□□□□ -0.25
RPS3-211ENST00000528847 RAD17O75943 681 aa13.51□□□□□ -0.25
RPS3-211ENST00000528847 NOGQ13253 232 aa13.51□□□□□ -0.25
RPS3-211ENST00000528847 CDC37L1Q7L3B6 337 aa13.51□□□□□ -0.25
RPS3-211ENST00000528847 USP48Q86UV5 1035 aa13.51□□□□□ -0.25
RPS3-211ENST00000528847 ZNF34Q8IZ26 560 aa13.51□□□□□ -0.25
RPS3-211ENST00000528847 RTF1Q92541 710 aaKnown RBP13.51□□□□□ -0.25
RPS3-211ENST00000528847 ATP6V0A2Q9Y487 856 aa13.51□□□□□ -0.25
RPS3-211ENST00000528847 AKAP11Q9UKA4 1901 aa13.51□□□□□ -0.25
RPS3-211ENST00000528847 FAM155AB1AL88 458 aaPredicted RBP13.5□□□□□ -0.25
RPS3-211ENST00000528847 NTSR2O95665 410 aa13.5□□□□□ -0.25
RPS3-211ENST00000528847 HUNKP57058 714 aa13.5□□□□□ -0.25
RPS3-211ENST00000528847 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
RPS3-211ENST00000528847 TAF7Q15545 349 aaPredicted RBP13.5□□□□□ -0.25
RPS3-211ENST00000528847 ZC3H15Q8WU90 426 aaKnown RBP13.5□□□□□ -0.25
RPS3-211ENST00000528847 RTFDC1Q9BY42 306 aaPredicted RBP13.5□□□□□ -0.25
RPS3-211ENST00000528847 PCGF6Q9BYE7 350 aa13.5□□□□□ -0.25
RPS3-211ENST00000528847 VPS33BQ9H267 617 aa13.5□□□□□ -0.25
RPS3-211ENST00000528847 ZBTB3Q9H5J0 574 aa13.5□□□□□ -0.25
RPS3-211ENST00000528847 MYL6BP14649 208 aa13.49□□□□□ -0.25
RPS3-211ENST00000528847 BCL2L13Q9BXK5 485 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms