RNA–Protein interactions for RNA: ENST00000527203.5

FGFR1-231, Transcript of fibroblast growth factor receptor 1, human

TSL 3

Gene FGFR1, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-231	ENST00000527203	LRP10	Q7Z4F1	713 aa		15.03	■□□□□ -0
FGFR1-231	ENST00000527203	KLRG1	Q96E93	195 aa		15.03	■□□□□ -0
FGFR1-231	ENST00000527203	NYX	Q9GZU5	481 aa		15.03	■□□□□ -0
FGFR1-231	ENST00000527203	SNED1	Q8TER0	1413 aa		15.02	■□□□□ -0
FGFR1-231	ENST00000527203	SCN4A	P35499	1836 aa		15.02	■□□□□ -0
FGFR1-231	ENST00000527203	AIMP1	Q12904	312 aa	Known RBP	15.02	■□□□□ -0
FGFR1-231	ENST00000527203	WDR43	Q15061	677 aa	Known RBP eCLIP	15.02	■□□□□ -0
FGFR1-231	ENST00000527203	GIGYF2	Q6Y7W6	1299 aa	Known RBP	15.02	■□□□□ -0
FGFR1-231	ENST00000527203	ZNF34	Q8IZ26	560 aa		15.02	■□□□□ -0
FGFR1-231	ENST00000527203	RPGR	Q92834	1020 aa	Known RBP	15.02	■□□□□ -0
FGFR1-231	ENST00000527203	TAF1	P21675	1872 aa		15.01	□□□□□ -0.01
FGFR1-231	ENST00000527203	RIC1	Q4ADV7	1423 aa		15.01	□□□□□ -0.01
FGFR1-231	ENST00000527203	IBTK	Q9P2D0	1353 aa	Predicted RBP	15.01	□□□□□ -0.01
FGFR1-231	ENST00000527203	ERBB4	Q15303	1308 aa		15.01	□□□□□ -0.01
FGFR1-231	ENST00000527203	LMOD3	Q0VAK6	560 aa		15.01	□□□□□ -0.01
FGFR1-231	ENST00000527203	CRY2	Q49AN0	593 aa		15.01	□□□□□ -0.01
FGFR1-231	ENST00000527203	TRIM35	Q9UPQ4	493 aa		15.01	□□□□□ -0.01
FGFR1-231	ENST00000527203	ALDH1B1	P30837	517 aa		15	□□□□□ -0.01
FGFR1-231	ENST00000527203	IFFO2	Q5TF58	517 aa		15	□□□□□ -0.01
FGFR1-231	ENST00000527203	SYNE4	Q8N205	404 aa		15	□□□□□ -0.01
FGFR1-231	ENST00000527203	XAGE3	Q8WTP9	111 aa		15	□□□□□ -0.01
FGFR1-231	ENST00000527203	RUNDC1	Q96C34	613 aa		15	□□□□□ -0.01
FGFR1-231	ENST00000527203	ADAMTS8	Q9UP79	889 aa		15	□□□□□ -0.01
FGFR1-231	ENST00000527203	LTBP1	Q14766	1721 aa		15	□□□□□ -0.01
FGFR1-231	ENST00000527203	DDX60	Q8IY21	1712 aa	Known RBP	15	□□□□□ -0.01
FGFR1-231	ENST00000527203	RNF123	Q5XPI4	1314 aa		14.99	□□□□□ -0.01
FGFR1-231	ENST00000527203	ADAMTSL1	Q8N6G6	1762 aa		14.99	□□□□□ -0.01
FGFR1-231	ENST00000527203	IARS	P41252	1262 aa	Known RBP	14.99	□□□□□ -0.01
FGFR1-231	ENST00000527203	COPS6	Q7L5N1	327 aa		14.99	□□□□□ -0.01
FGFR1-231	ENST00000527203	RTKN2	Q8IZC4	609 aa		14.99	□□□□□ -0.01
FGFR1-231	ENST00000527203	PPEF1	O14829	653 aa	Predicted RBP	14.98	□□□□□ -0.01
FGFR1-231	ENST00000527203	EAPP	Q56P03	285 aa	Predicted RBP	14.98	□□□□□ -0.01
FGFR1-231	ENST00000527203	CHPF2	Q9P2E5	772 aa		14.98	□□□□□ -0.01
FGFR1-231	ENST00000527203	CHADL	Q6NUI6	762 aa		14.97	□□□□□ -0.01
FGFR1-231	ENST00000527203	PPP1R42	Q7Z4L9	355 aa		14.97	□□□□□ -0.01
FGFR1-231	ENST00000527203	PRKRIP1	Q9H875	184 aa	Predicted RBP	14.97	□□□□□ -0.01
FGFR1-231	ENST00000527203	COL4A1	P02462	1669 aa		14.97	□□□□□ -0.01
FGFR1-231	ENST00000527203	CHL1	O00533	1208 aa		14.96	□□□□□ -0.01
FGFR1-231	ENST00000527203	HCLS1	P14317	486 aa	Predicted RBP	14.96	□□□□□ -0.01
FGFR1-231	ENST00000527203	PARP10	Q53GL7	1025 aa		14.96	□□□□□ -0.01
FGFR1-231	ENST00000527203	JMY	Q8N9B5	988 aa		14.96	□□□□□ -0.01
FGFR1-231	ENST00000527203	RBM17	Q96I25	401 aa	Known RBP	14.96	□□□□□ -0.01
FGFR1-231	ENST00000527203	L3MBTL3	Q96JM7	780 aa	Predicted RBP	14.96	□□□□□ -0.01
FGFR1-231	ENST00000527203	UTP14A	Q9BVJ6	771 aa	Known RBP	14.96	□□□□□ -0.01
FGFR1-231	ENST00000527203	TAF1D	Q9H5J8	278 aa	Predicted RBP	14.96	□□□□□ -0.01
FGFR1-231	ENST00000527203	ABCC4	O15439	1325 aa		14.95	□□□□□ -0.02
FGFR1-231	ENST00000527203	IQCA1L	A6NCM1	817 aa		14.95	□□□□□ -0.02
FGFR1-231	ENST00000527203	HOXA10	P31260	410 aa	Predicted RBP	14.95	□□□□□ -0.02
FGFR1-231	ENST00000527203	HDGFL1	Q5TGJ6	251 aa		14.95	□□□□□ -0.02
FGFR1-231	ENST00000527203	PSMD1	Q99460	953 aa		14.95	□□□□□ -0.02
FGFR1-231	ENST00000527203	BABAM1	Q9NWV8	329 aa		14.95	□□□□□ -0.02
FGFR1-231	ENST00000527203	GJA3	Q9Y6H8	435 aa		14.95	□□□□□ -0.02
FGFR1-231	ENST00000527203	PCNT	O95613	3336 aa		14.94	□□□□□ -0.02
FGFR1-231	ENST00000527203	FZD9	O00144	591 aa		14.94	□□□□□ -0.02
FGFR1-231	ENST00000527203	NLRP10	Q86W26	655 aa		14.94	□□□□□ -0.02
FGFR1-231	ENST00000527203	NLRP3	Q96P20	1036 aa		14.94	□□□□□ -0.02
FGFR1-231	ENST00000527203	DDX21	Q9NR30	783 aa	Known RBP eCLIP	14.94	□□□□□ -0.02
FGFR1-231	ENST00000527203	MKRN1	Q9UHC7	482 aa	Known RBP	14.94	□□□□□ -0.02
FGFR1-231	ENST00000527203	HACL1	Q9UJ83	578 aa		14.94	□□□□□ -0.02
FGFR1-231	ENST00000527203	EPHX2	P34913	555 aa		14.93	□□□□□ -0.02
FGFR1-231	ENST00000527203	AOC3	Q16853	763 aa		14.93	□□□□□ -0.02
FGFR1-231	ENST00000527203	LARGE2	Q8N3Y3	721 aa		14.93	□□□□□ -0.02
FGFR1-231	ENST00000527203	JDP2	Q8WYK2	163 aa		14.93	□□□□□ -0.02
FGFR1-231	ENST00000527203	CRAMP1	Q96RY5	1269 aa		14.93	□□□□□ -0.02
FGFR1-231	ENST00000527203	MBIP	Q9NS73	344 aa		14.93	□□□□□ -0.02
FGFR1-231	ENST00000527203	TRMT112	Q9UI30	125 aa	Known RBP	14.93	□□□□□ -0.02
FGFR1-231	ENST00000527203	CLEC11A	Q9Y240	323 aa		14.93	□□□□□ -0.02
FGFR1-231	ENST00000527203	LRRC37A	A6NMS7	1700 aa		14.92	□□□□□ -0.02
FGFR1-231	ENST00000527203	ATP5J2-PTCD1	G3V325	749 aa		14.92	□□□□□ -0.02
FGFR1-231	ENST00000527203	APAF1	O14727	1248 aa		14.92	□□□□□ -0.02
FGFR1-231	ENST00000527203	RTL5	Q5HYW3	569 aa	Predicted RBP	14.92	□□□□□ -0.02
FGFR1-231	ENST00000527203	DUSP27	Q5VZP5	1158 aa		14.92	□□□□□ -0.02
FGFR1-231	ENST00000527203	LDHD	Q86WU2	507 aa		14.92	□□□□□ -0.02
FGFR1-231	ENST00000527203	DUOX1	Q9NRD9	1551 aa		14.92	□□□□□ -0.02
FGFR1-231	ENST00000527203	ELL2	O00472	640 aa	Predicted RBP	14.91	□□□□□ -0.02
FGFR1-231	ENST00000527203	PPIP5K2	O43314	1243 aa		14.91	□□□□□ -0.02
FGFR1-231	ENST00000527203	HSPA1A	P0DMV8	641 aa	Known RBP	14.91	□□□□□ -0.02
FGFR1-231	ENST00000527203	HSPA1B	P0DMV9	641 aa	Known RBP	14.91	□□□□□ -0.02
FGFR1-231	ENST00000527203	TCIRG1	Q13488	830 aa		14.91	□□□□□ -0.02
FGFR1-231	ENST00000527203	CCDC184	Q52MB2	194 aa		14.91	□□□□□ -0.02
FGFR1-231	ENST00000527203	HSP90AB3P	Q58FF7	597 aa		14.91	□□□□□ -0.02
FGFR1-231	ENST00000527203	COL13A1	Q5TAT6	717 aa	Predicted RBP	14.91	□□□□□ -0.02
FGFR1-231	ENST00000527203	MAP1S	Q66K74	1059 aa	Predicted RBP	14.91	□□□□□ -0.02
FGFR1-231	ENST00000527203	GPC2	Q8N158	579 aa		14.91	□□□□□ -0.02
FGFR1-231	ENST00000527203	PASK	Q96RG2	1323 aa		14.91	□□□□□ -0.02
FGFR1-231	ENST00000527203	EIF6	P56537	245 aa	Known RBP	14.9	□□□□□ -0.02
FGFR1-231	ENST00000527203	SLC10A5	Q5PT55	438 aa		14.9	□□□□□ -0.02
FGFR1-231	ENST00000527203	CC2D2B	Q6DHV5	1058 aa		14.9	□□□□□ -0.02
FGFR1-231	ENST00000527203	CFAP44	Q96MT7	982 aa		14.9	□□□□□ -0.02
FGFR1-231	ENST00000527203	CREBZF	Q9NS37	354 aa		14.9	□□□□□ -0.02
FGFR1-231	ENST00000527203	ATP6V0A2	Q9Y487	856 aa		14.9	□□□□□ -0.02
FGFR1-231	ENST00000527203	SH3TC1	Q8TE82	1336 aa		14.9	□□□□□ -0.02
FGFR1-231	ENST00000527203	SCNN1D	P51172	638 aa		14.89	□□□□□ -0.03
FGFR1-231	ENST00000527203	FMR1	Q06787	632 aa	Known RBP eCLIP	14.89	□□□□□ -0.03
FGFR1-231	ENST00000527203	NIM1K	Q8IY84	436 aa		14.89	□□□□□ -0.03
FGFR1-231	ENST00000527203	PLBD2	Q8NHP8	589 aa		14.89	□□□□□ -0.03
FGFR1-231	ENST00000527203	ITGBL1	O95965	494 aa	Predicted RBP	14.88	□□□□□ -0.03
FGFR1-231	ENST00000527203	EPS15	P42566	896 aa		14.88	□□□□□ -0.03
FGFR1-231	ENST00000527203	ANKRD13D	Q6ZTN6	518 aa		14.88	□□□□□ -0.03
FGFR1-231	ENST00000527203	FAM89A	Q96GI7	184 aa		14.88	□□□□□ -0.03

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms