RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ADCK5Q3MIX3 580 aa21.19■□□□□ 0.98
USH1C-205ENST00000527020 SNRKQ9NRH2 765 aa21.19■□□□□ 0.98
USH1C-205ENST00000527020 CCDC171Q6TFL3 1326 aa21.19■□□□□ 0.98
USH1C-205ENST00000527020 CASTP20810 708 aaKnown RBP21.19■□□□□ 0.98
USH1C-205ENST00000527020 NMIQ13287 307 aaPredicted RBP21.19■□□□□ 0.98
USH1C-205ENST00000527020 NECTIN1Q15223 517 aa21.19■□□□□ 0.98
USH1C-205ENST00000527020 PRPF40BQ6NWY9 871 aaKnown RBP21.19■□□□□ 0.98
USH1C-205ENST00000527020 LARP6Q9BRS8 491 aaKnown RBP21.19■□□□□ 0.98
USH1C-205ENST00000527020 COPRSQ9NQ92 184 aa21.19■□□□□ 0.98
USH1C-205ENST00000527020 TMEM63CQ9P1W3 806 aa21.19■□□□□ 0.98
USH1C-205ENST00000527020 LIMCH1Q9UPQ0 1083 aa21.19■□□□□ 0.98
USH1C-205ENST00000527020 RABL6Q3YEC7 729 aaPredicted RBP21.18■□□□□ 0.98
USH1C-205ENST00000527020 NUP188Q5SRE5 1749 aa21.18■□□□□ 0.98
USH1C-205ENST00000527020 BRINP3Q76B58 766 aa21.17■□□□□ 0.98
USH1C-205ENST00000527020 BOLA2Q9H3K6 86 aa21.17■□□□□ 0.98
USH1C-205ENST00000527020 LARGE1O95461 756 aa21.17■□□□□ 0.98
USH1C-205ENST00000527020 NASPP49321 788 aaPredicted RBP21.17■□□□□ 0.98
USH1C-205ENST00000527020 HSPA2P54652 639 aa21.17■□□□□ 0.98
USH1C-205ENST00000527020 CASP7P55210 303 aa21.17■□□□□ 0.98
USH1C-205ENST00000527020 PTPN12Q05209 780 aaKnown RBP21.17■□□□□ 0.98
USH1C-205ENST00000527020 ZSWIM6Q9HCJ5 1215 aa21.17■□□□□ 0.98
USH1C-205ENST00000527020 SHANK3Q9BYB0 1731 aa21.17■□□□□ 0.98
USH1C-205ENST00000527020 PAPPAQ13219 1627 aa21.16■□□□□ 0.98
USH1C-205ENST00000527020 UBE3BQ7Z3V4 1068 aa21.16■□□□□ 0.98
USH1C-205ENST00000527020 TM6SF1Q9BZW5 370 aa21.16■□□□□ 0.98
USH1C-205ENST00000527020 WDR33Q9C0J8 1336 aaKnown RBP21.16■□□□□ 0.98
USH1C-205ENST00000527020 A0A0D9SFI3 127 aa21.16■□□□□ 0.98
USH1C-205ENST00000527020 ATP5J2-PTCD1G3V325 749 aa21.16■□□□□ 0.98
USH1C-205ENST00000527020 HIP1O00291 1037 aa21.16■□□□□ 0.98
USH1C-205ENST00000527020 PTCD1O75127 700 aaKnown RBP21.16■□□□□ 0.98
USH1C-205ENST00000527020 MAP4K1Q92918 833 aa21.16■□□□□ 0.98
USH1C-205ENST00000527020 JAKMIP1Q96N16 626 aaKnown RBP21.16■□□□□ 0.98
USH1C-205ENST00000527020 NBPF26B4DH59 902 aa21.15■□□□□ 0.98
USH1C-205ENST00000527020 NBPF14Q5TI25 921 aa21.15■□□□□ 0.98
USH1C-205ENST00000527020 NBPF10Q6P3W6 841 aaKnown RBP21.15■□□□□ 0.98
USH1C-205ENST00000527020 NBPF15Q8N660 670 aa21.15■□□□□ 0.98
USH1C-205ENST00000527020 RBM8AQ9Y5S9 174 aaKnown RBP21.15■□□□□ 0.98
USH1C-205ENST00000527020 WDR17Q8IZU2 1322 aa21.15■□□□□ 0.98
USH1C-205ENST00000527020 PRIM1P49642 420 aaKnown RBP21.14■□□□□ 0.98
USH1C-205ENST00000527020 VPS53Q5VIR6 699 aa21.14■□□□□ 0.98
USH1C-205ENST00000527020 PLBD2Q8NHP8 589 aa21.14■□□□□ 0.98
USH1C-205ENST00000527020 TJP1Q07157 1748 aa21.14■□□□□ 0.98
USH1C-205ENST00000527020 ABCA3Q99758 1704 aa21.14■□□□□ 0.97
USH1C-205ENST00000527020 MED23Q9ULK4 1368 aa21.14■□□□□ 0.97
USH1C-205ENST00000527020 MBD3O95983 291 aa21.14■□□□□ 0.97
USH1C-205ENST00000527020 CREB3L3Q68CJ9 461 aa21.14■□□□□ 0.97
USH1C-205ENST00000527020 PPP1R9BQ96SB3 815 aa21.14■□□□□ 0.97
USH1C-205ENST00000527020 RBSNQ9H1K0 784 aa21.14■□□□□ 0.97
USH1C-205ENST00000527020 KCPQ6ZWJ8 1503 aa21.13■□□□□ 0.97
USH1C-205ENST00000527020 DBNLQ9UJU6 430 aaKnown RBP21.13■□□□□ 0.97
USH1C-205ENST00000527020 ERBB4Q15303 1308 aa21.13■□□□□ 0.97
USH1C-205ENST00000527020 COL5A2P05997 1499 aaPredicted RBP21.13■□□□□ 0.97
USH1C-205ENST00000527020 A0A087WZG4 1122 aa21.13■□□□□ 0.97
USH1C-205ENST00000527020 FSD1Q9BTV5 496 aa21.13■□□□□ 0.97
USH1C-205ENST00000527020 PDRG1Q9NUG6 133 aa21.13■□□□□ 0.97
USH1C-205ENST00000527020 JCADQ9P266 1359 aa21.12■□□□□ 0.97
USH1C-205ENST00000527020 TFCP2Q12800 502 aa21.12■□□□□ 0.97
USH1C-205ENST00000527020 COL9A3Q14050 684 aaPredicted RBP21.12■□□□□ 0.97
USH1C-205ENST00000527020 TNNI3KQ59H18 835 aa21.12■□□□□ 0.97
USH1C-205ENST00000527020 EDC3Q96F86 508 aaKnown RBP21.12■□□□□ 0.97
USH1C-205ENST00000527020 FPGT-TNNI3KV9GXZ4 949 aa21.12■□□□□ 0.97
USH1C-205ENST00000527020 PCDH11XQ9BZA7 1347 aa21.12■□□□□ 0.97
USH1C-205ENST00000527020 PCDH11YQ9BZA8 1340 aa21.12■□□□□ 0.97
USH1C-205ENST00000527020 CCDC173Q0VFZ6 552 aa21.12■□□□□ 0.97
USH1C-205ENST00000527020 ST3GAL1Q11201 340 aa21.12■□□□□ 0.97
USH1C-205ENST00000527020 FOXD4L6Q3SYB3 417 aaPredicted RBP21.12■□□□□ 0.97
USH1C-205ENST00000527020 FOXD4L3Q6VB84 417 aaPredicted RBP21.12■□□□□ 0.97
USH1C-205ENST00000527020 ZCRB1Q8TBF4 217 aaKnown RBP21.12■□□□□ 0.97
USH1C-205ENST00000527020 CYP46A1Q9Y6A2 500 aa21.12■□□□□ 0.97
USH1C-205ENST00000527020 SLC27A2O14975 620 aa21.11■□□□□ 0.97
USH1C-205ENST00000527020 DDX54Q8TDD1 881 aaKnown RBP21.11■□□□□ 0.97
USH1C-205ENST00000527020 GDPD2Q9HCC8 539 aa21.11■□□□□ 0.97
USH1C-205ENST00000527020 PRDM11Q9NQV5 511 aa21.11■□□□□ 0.97
USH1C-205ENST00000527020 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.11■□□□□ 0.97
USH1C-205ENST00000527020 ATP5JP18859 108 aa21.1■□□□□ 0.97
USH1C-205ENST00000527020 SYT1P21579 422 aa21.1■□□□□ 0.97
USH1C-205ENST00000527020 CLCN1P35523 988 aa21.1■□□□□ 0.97
USH1C-205ENST00000527020 LRSAM1Q6UWE0 723 aa21.1■□□□□ 0.97
USH1C-205ENST00000527020 SYCE3A1L190 88 aa21.1■□□□□ 0.97
USH1C-205ENST00000527020 GADD45BO75293 160 aaPredicted RBP21.1■□□□□ 0.97
USH1C-205ENST00000527020 ZSCAN22P10073 491 aaPredicted RBP21.1■□□□□ 0.97
USH1C-205ENST00000527020 ZNF589Q86UQ0 364 aaPredicted RBP21.1■□□□□ 0.97
USH1C-205ENST00000527020 SOS2Q07890 1332 aaPredicted RBP21.1■□□□□ 0.97
USH1C-205ENST00000527020 STRCQ7RTU9 1775 aa21.09■□□□□ 0.97
USH1C-205ENST00000527020 ZKSCAN1P17029 563 aaPredicted RBP21.09■□□□□ 0.97
USH1C-205ENST00000527020 FOXO4P98177 505 aa21.09■□□□□ 0.97
USH1C-205ENST00000527020 TTLL7Q6ZT98 887 aa21.09■□□□□ 0.97
USH1C-205ENST00000527020 TOM1L2Q6ZVM7 507 aa21.09■□□□□ 0.97
USH1C-205ENST00000527020 USP48Q86UV5 1035 aa21.09■□□□□ 0.97
USH1C-205ENST00000527020 H7C1W4 665 aa21.09■□□□□ 0.97
USH1C-205ENST00000527020 STX6O43752 255 aa21.09■□□□□ 0.97
USH1C-205ENST00000527020 NKX1-1Q15270 411 aaPredicted RBP21.09■□□□□ 0.97
USH1C-205ENST00000527020 CCDC83Q8IWF9 413 aa21.09■□□□□ 0.97
USH1C-205ENST00000527020 SMC3Q9UQE7 1217 aa21.09■□□□□ 0.97
USH1C-205ENST00000527020 TAF6LQ9Y6J9 622 aa21.09■□□□□ 0.97
USH1C-205ENST00000527020 ESPNB1AK53 854 aa21.08■□□□□ 0.97
USH1C-205ENST00000527020 ERVV-2B6SEH9 535 aa21.08■□□□□ 0.97
USH1C-205ENST00000527020 ME3Q16798 604 aa21.08■□□□□ 0.97
USH1C-205ENST00000527020 TMEM87AQ8NBN3 555 aa21.08■□□□□ 0.97
USH1C-205ENST00000527020 ZSCAN31Q96LW9 406 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms