RNA–Protein interactions for RNA: ENST00000525248.1

CKAP5-203, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 3

Gene CKAP5, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-203ENST00000525248 NRXN2Q9P2S2 1712 aa12.24□□□□□ -0.45
CKAP5-203ENST00000525248 AFDNP55196 1824 aaKnown RBP12.23□□□□□ -0.45
CKAP5-203ENST00000525248 PIP4K2AP48426 406 aaPredicted RBP12.23□□□□□ -0.45
CKAP5-203ENST00000525248 EIF5P55010 431 aaKnown RBP12.23□□□□□ -0.45
CKAP5-203ENST00000525248 MARVELD3Q96A59 401 aa12.23□□□□□ -0.45
CKAP5-203ENST00000525248 ARFGEF1Q9Y6D6 1849 aa12.23□□□□□ -0.45
CKAP5-203ENST00000525248 A0A087WZG4 1122 aa12.22□□□□□ -0.45
CKAP5-203ENST00000525248 PRAMEF22A3QJZ6 481 aa12.22□□□□□ -0.45
CKAP5-203ENST00000525248 POTEMA6NI47 508 aa12.22□□□□□ -0.45
CKAP5-203ENST00000525248 A1BGP04217 495 aa12.22□□□□□ -0.45
CKAP5-203ENST00000525248 SERPINB2P05120 415 aa12.22□□□□□ -0.45
CKAP5-203ENST00000525248 TBC1D9BQ66K14 1250 aa12.22□□□□□ -0.45
CKAP5-203ENST00000525248 POTEGQ6S5H5 508 aa12.22□□□□□ -0.45
CKAP5-203ENST00000525248 TBC1D2BQ9UPU7 963 aa12.22□□□□□ -0.45
CKAP5-203ENST00000525248 BCORQ6W2J9 1755 aa12.21□□□□□ -0.45
CKAP5-203ENST00000525248 DLEC1Q9Y238 1755 aa12.21□□□□□ -0.45
CKAP5-203ENST00000525248 COL11A2P13942 1736 aaPredicted RBP12.21□□□□□ -0.45
CKAP5-203ENST00000525248 PPP1R15BQ5SWA1 713 aa12.21□□□□□ -0.45
CKAP5-203ENST00000525248 C9orf131Q5VYM1 1079 aa12.21□□□□□ -0.45
CKAP5-203ENST00000525248 TEX13AQ9BXU3 409 aaPredicted RBP12.21□□□□□ -0.45
CKAP5-203ENST00000525248 IL6STP40189 918 aaPredicted RBP12.2□□□□□ -0.46
CKAP5-203ENST00000525248 RASSF7Q02833 373 aa12.2□□□□□ -0.46
CKAP5-203ENST00000525248 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
CKAP5-203ENST00000525248 C2CD5Q86YS7 1000 aa12.2□□□□□ -0.46
CKAP5-203ENST00000525248 CCDC24Q8N4L8 307 aa12.2□□□□□ -0.46
CKAP5-203ENST00000525248 DDX27Q96GQ7 796 aaKnown RBP12.2□□□□□ -0.46
CKAP5-203ENST00000525248 RNF181Q9P0P0 153 aa12.2□□□□□ -0.46
CKAP5-203ENST00000525248 NPHP1O15259 732 aa12.19□□□□□ -0.46
CKAP5-203ENST00000525248 CAMTA2O94983 1202 aa12.19□□□□□ -0.46
CKAP5-203ENST00000525248 DZIP3Q86Y13 1208 aaKnown RBP12.19□□□□□ -0.46
CKAP5-203ENST00000525248 NMRK2Q9NPI5 230 aa12.19□□□□□ -0.46
CKAP5-203ENST00000525248 NEFMP07197 916 aa12.18□□□□□ -0.46
CKAP5-203ENST00000525248 EMP3P54852 163 aa12.18□□□□□ -0.46
CKAP5-203ENST00000525248 ARSIQ5FYB1 569 aa12.18□□□□□ -0.46
CKAP5-203ENST00000525248 THUMPD2Q9BTF0 503 aaKnown RBP12.18□□□□□ -0.46
CKAP5-203ENST00000525248 MIS18AQ9NYP9 233 aa12.18□□□□□ -0.46
CKAP5-203ENST00000525248 USP16Q9Y5T5 823 aa12.18□□□□□ -0.46
CKAP5-203ENST00000525248 ANKRD31Q8N7Z5 1873 aa12.18□□□□□ -0.46
CKAP5-203ENST00000525248 LAMB4A4D0S4 1761 aa12.18□□□□□ -0.46
CKAP5-203ENST00000525248 MAPK8IP3Q9UPT6 1336 aa12.17□□□□□ -0.46
CKAP5-203ENST00000525248 H0YIN7 160 aa12.17□□□□□ -0.46
CKAP5-203ENST00000525248 SNRPA1P09661 255 aaKnown RBP12.17□□□□□ -0.46
CKAP5-203ENST00000525248 PRR5LQ6MZQ0 368 aa12.17□□□□□ -0.46
CKAP5-203ENST00000525248 CNBD1Q8NA66 436 aa12.17□□□□□ -0.46
CKAP5-203ENST00000525248 KHSRPQ92945 711 aaKnown RBP eCLIP12.17□□□□□ -0.464e-9■■■■■ 28.7
CKAP5-203ENST00000525248 TSHZ2Q9NRE2 1034 aa12.17□□□□□ -0.46
CKAP5-203ENST00000525248 KDM3BQ7LBC6 1761 aa12.16□□□□□ -0.46
CKAP5-203ENST00000525248 HTATSF1O43719 755 aaKnown RBP12.16□□□□□ -0.46
CKAP5-203ENST00000525248 HOXB1P14653 301 aaPredicted RBP12.16□□□□□ -0.46
CKAP5-203ENST00000525248 PLCB2Q00722 1185 aa12.16□□□□□ -0.46
CKAP5-203ENST00000525248 TTLL6Q8N841 843 aa12.16□□□□□ -0.46
CKAP5-203ENST00000525248 SETDB2Q96T68 719 aa12.16□□□□□ -0.46
CKAP5-203ENST00000525248 ZSWIM6Q9HCJ5 1215 aa12.16□□□□□ -0.46
CKAP5-203ENST00000525248 TIAM2Q8IVF5 1701 aa12.16□□□□□ -0.46
CKAP5-203ENST00000525248 DLG5Q8TDM6 1919 aa12.15□□□□□ -0.46
CKAP5-203ENST00000525248 NBPF26B4DH59 902 aa12.15□□□□□ -0.46
CKAP5-203ENST00000525248 HSPA6P17066 643 aa12.15□□□□□ -0.46
CKAP5-203ENST00000525248 MFSD10Q14728 455 aa12.15□□□□□ -0.46
CKAP5-203ENST00000525248 TAF7Q15545 349 aaPredicted RBP12.15□□□□□ -0.46
CKAP5-203ENST00000525248 NFE2L2Q16236 605 aa12.15□□□□□ -0.46
CKAP5-203ENST00000525248 GPR153Q6NV75 609 aa12.15□□□□□ -0.46
CKAP5-203ENST00000525248 NBPF10Q6P3W6 841 aaKnown RBP12.15□□□□□ -0.46
CKAP5-203ENST00000525248 NBPF15Q8N660 670 aa12.15□□□□□ -0.46
CKAP5-203ENST00000525248 ZNF622Q969S3 477 aaKnown RBP eCLIP12.15□□□□□ -0.46
CKAP5-203ENST00000525248 PLEKHF1Q96S99 279 aa12.15□□□□□ -0.46
CKAP5-203ENST00000525248 PRELPP51888 382 aa12.14□□□□□ -0.47
CKAP5-203ENST00000525248 ST5P78524 1137 aa12.14□□□□□ -0.47
CKAP5-203ENST00000525248 BRIP1Q9BX63 1249 aa12.14□□□□□ -0.47
CKAP5-203ENST00000525248 ZNF652Q9Y2D9 606 aa12.14□□□□□ -0.47
CKAP5-203ENST00000525248 PCDHGA4Q9Y5G9 962 aa12.14□□□□□ -0.47
CKAP5-203ENST00000525248 KDM2BQ8NHM5 1336 aa12.13□□□□□ -0.47
CKAP5-203ENST00000525248 NFKBIEO00221 500 aa12.13□□□□□ -0.47
CKAP5-203ENST00000525248 SLC34A2O95436 690 aa12.13□□□□□ -0.47
CKAP5-203ENST00000525248 PDE6BP35913 854 aa12.13□□□□□ -0.47
CKAP5-203ENST00000525248 NBPF5PQ86XG9 351 aaPredicted RBP12.13□□□□□ -0.47
CKAP5-203ENST00000525248 TNRC6CQ9HCJ0 1690 aaKnown RBP12.13□□□□□ -0.47
CKAP5-203ENST00000525248 FAM177BA6PVY3 158 aa12.12□□□□□ -0.47
CKAP5-203ENST00000525248 C21orf2O43822 256 aa12.12□□□□□ -0.47
CKAP5-203ENST00000525248 LMNB1P20700 586 aa12.12□□□□□ -0.47
CKAP5-203ENST00000525248 DDX10Q13206 875 aaKnown RBP12.12□□□□□ -0.47
CKAP5-203ENST00000525248 C16orf71Q8IYS4 520 aaPredicted RBP12.12□□□□□ -0.47
CKAP5-203ENST00000525248 NGEFQ8N5V2 710 aa12.12□□□□□ -0.47
CKAP5-203ENST00000525248 NIP7Q9Y221 180 aaKnown RBP eCLIP12.12□□□□□ -0.47
CKAP5-203ENST00000525248 SBF1O95248 1867 aa12.11□□□□□ -0.47
CKAP5-203ENST00000525248 CACNA1SQ13698 1873 aa12.11□□□□□ -0.47
CKAP5-203ENST00000525248 TOMM70O94826 608 aa12.11□□□□□ -0.47
CKAP5-203ENST00000525248 PRPF40BQ6NWY9 871 aaKnown RBP12.11□□□□□ -0.47
CKAP5-203ENST00000525248 PNISRQ8TF01 805 aaKnown RBP12.11□□□□□ -0.47
CKAP5-203ENST00000525248 ABCC12Q96J65 1359 aa12.1□□□□□ -0.47
CKAP5-203ENST00000525248 FAM205CA6NFA0 338 aa12.1□□□□□ -0.47
CKAP5-203ENST00000525248 NUDT7P0C024 238 aa12.1□□□□□ -0.47
CKAP5-203ENST00000525248 MYL6BP14649 208 aa12.1□□□□□ -0.47
CKAP5-203ENST00000525248 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
CKAP5-203ENST00000525248 RALBP1Q15311 655 aa12.1□□□□□ -0.47
CKAP5-203ENST00000525248 CLEC4GQ6UXB4 293 aa12.1□□□□□ -0.47
CKAP5-203ENST00000525248 CCDC146Q8IYE0 955 aa12.1□□□□□ -0.47
CKAP5-203ENST00000525248 TSPYL4Q9UJ04 414 aa12.1□□□□□ -0.47
CKAP5-203ENST00000525248 RRP7AQ9Y3A4 280 aaKnown RBP12.1□□□□□ -0.47
CKAP5-203ENST00000525248 MYBBP1AQ9BQG0 1328 aaKnown RBP12.1□□□□□ -0.47
CKAP5-203ENST00000525248 ZC3H4Q9UPT8 1303 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms