RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 RANGAP1P46060 587 aaPredicted RBP6.6□□□□□ -1.35
SKP1-212ENST00000523966 FGD1P98174 961 aa6.6□□□□□ -1.35
SKP1-212ENST00000523966 TMC7Q7Z402 723 aa6.6□□□□□ -1.35
SKP1-212ENST00000523966 ZCCHC2Q9C0B9 1178 aaKnown RBP6.6□□□□□ -1.35
SKP1-212ENST00000523966 RTCBQ9Y3I0 505 aaKnown RBP6.6□□□□□ -1.35
SKP1-212ENST00000523966 PCDHGC4Q9Y5F7 938 aa6.6□□□□□ -1.35
SKP1-212ENST00000523966 SENP3-EIF4A1A0A087X0R7 540 aa6.59□□□□□ -1.35
SKP1-212ENST00000523966 UBAP1LF5GYI3 381 aa6.59□□□□□ -1.35
SKP1-212ENST00000523966 KHNYNO15037 678 aaKnown RBP6.59□□□□□ -1.35
SKP1-212ENST00000523966 INPP5BP32019 993 aa6.59□□□□□ -1.35
SKP1-212ENST00000523966 RBM25P49756 843 aaKnown RBP6.59□□□□□ -1.35
SKP1-212ENST00000523966 EAPPQ56P03 285 aaPredicted RBP6.59□□□□□ -1.35
SKP1-212ENST00000523966 FAM26DQ5JW98 314 aa6.59□□□□□ -1.35
SKP1-212ENST00000523966 SAMD5Q5TGI4 173 aa6.59□□□□□ -1.35
SKP1-212ENST00000523966 TRIM22Q8IYM9 498 aa6.59□□□□□ -1.35
SKP1-212ENST00000523966 BRD7Q9NPI1 651 aa6.59□□□□□ -1.35
SKP1-212ENST00000523966 PHF24Q9UPV7 400 aa6.59□□□□□ -1.35
SKP1-212ENST00000523966 OPLAHO14841 1288 aa6.58□□□□□ -1.36
SKP1-212ENST00000523966 COL19A1Q14993 1142 aa6.58□□□□□ -1.36
SKP1-212ENST00000523966 TRERF1Q96PN7 1200 aa6.58□□□□□ -1.36
SKP1-212ENST00000523966 DMGDHQ9UI17 866 aaKnown RBP6.58□□□□□ -1.36
SKP1-212ENST00000523966 KCNH4Q9UQ05 1017 aa6.58□□□□□ -1.36
SKP1-212ENST00000523966 SNRPBP14678 240 aaKnown RBP6.57□□□□□ -1.36
SKP1-212ENST00000523966 ITGA6P23229 1130 aa6.57□□□□□ -1.36
SKP1-212ENST00000523966 MAPK8P45983 427 aa6.57□□□□□ -1.36
SKP1-212ENST00000523966 ATP2B2Q01814 1243 aa6.57□□□□□ -1.36
SKP1-212ENST00000523966 TYRO3Q06418 890 aa6.57□□□□□ -1.36
SKP1-212ENST00000523966 ZNF438Q7Z4V0 828 aa6.57□□□□□ -1.36
SKP1-212ENST00000523966 GJD3Q8N144 294 aa6.57□□□□□ -1.36
SKP1-212ENST00000523966 PNMA5Q96PV4 448 aa6.57□□□□□ -1.36
SKP1-212ENST00000523966 NIF3L1Q9GZT8 377 aa6.57□□□□□ -1.36
SKP1-212ENST00000523966 C11orf16Q9NQ32 467 aa6.57□□□□□ -1.36
SKP1-212ENST00000523966 DCDC2BA2VCK2 349 aa6.56□□□□□ -1.36
SKP1-212ENST00000523966 CDC14CA4D256 554 aa6.56□□□□□ -1.36
SKP1-212ENST00000523966 XYLBO75191 536 aa6.56□□□□□ -1.36
SKP1-212ENST00000523966 FAM157BP0CG42 384 aa6.56□□□□□ -1.36
SKP1-212ENST00000523966 ITGAEP38570 1179 aa6.56□□□□□ -1.36
SKP1-212ENST00000523966 NEUROD1Q13562 356 aa6.56□□□□□ -1.36
SKP1-212ENST00000523966 LAMC2Q13753 1193 aa6.56□□□□□ -1.36
SKP1-212ENST00000523966 DBN1Q16643 649 aa6.56□□□□□ -1.36
SKP1-212ENST00000523966 TTC39BQ5VTQ0 682 aaPredicted RBP6.56□□□□□ -1.36
SKP1-212ENST00000523966 NPAS4Q8IUM7 802 aa6.56□□□□□ -1.36
SKP1-212ENST00000523966 GIPC2Q8TF65 315 aa6.56□□□□□ -1.36
SKP1-212ENST00000523966 KLRG1Q96E93 195 aa6.56□□□□□ -1.36
SKP1-212ENST00000523966 FAM129BQ96TA1 746 aa6.56□□□□□ -1.36
SKP1-212ENST00000523966 USP20Q9Y2K6 914 aa6.56□□□□□ -1.36
SKP1-212ENST00000523966 TREHO43280 583 aa6.55□□□□□ -1.36
SKP1-212ENST00000523966 PDE12Q6L8Q7 609 aaKnown RBP6.55□□□□□ -1.36
SKP1-212ENST00000523966 SV2AQ7L0J3 742 aa6.55□□□□□ -1.36
SKP1-212ENST00000523966 GTPBP3Q969Y2 492 aaKnown RBP6.55□□□□□ -1.36
SKP1-212ENST00000523966 GGNBP2Q9H3C7 697 aa6.55□□□□□ -1.36
SKP1-212ENST00000523966 MARK1Q9P0L2 795 aa6.55□□□□□ -1.36
SKP1-212ENST00000523966 RBM47A0AV96 593 aaKnown RBP6.54□□□□□ -1.36
SKP1-212ENST00000523966 E9PSI1 815 aa6.54□□□□□ -1.36
SKP1-212ENST00000523966 PPFIA3O75145 1194 aa6.54□□□□□ -1.36
SKP1-212ENST00000523966 CCINQ13939 588 aa6.54□□□□□ -1.36
SKP1-212ENST00000523966 ALKBH8Q96BT7 664 aaKnown RBP6.54□□□□□ -1.36
SKP1-212ENST00000523966 ATXN7L1Q9ULK2 861 aaPredicted RBP6.54□□□□□ -1.36
SKP1-212ENST00000523966 GPR182O15218 404 aa6.53□□□□□ -1.36
SKP1-212ENST00000523966 LDHBP07195 334 aaKnown RBP6.53□□□□□ -1.36
SKP1-212ENST00000523966 MAPTP10636 758 aaKnown RBP6.53□□□□□ -1.36
SKP1-212ENST00000523966 KCNQ4P56696 695 aa6.53□□□□□ -1.36
SKP1-212ENST00000523966 XPCQ01831 940 aaPredicted RBP6.53□□□□□ -1.36
SKP1-212ENST00000523966 TNP2Q05952 138 aa6.53□□□□□ -1.36
SKP1-212ENST00000523966 SFSWAPQ12872 951 aaKnown RBP6.53□□□□□ -1.36
SKP1-212ENST00000523966 XKR5Q6UX68 686 aa6.53□□□□□ -1.36
SKP1-212ENST00000523966 NLRP13Q86W25 1043 aa6.53□□□□□ -1.36
SKP1-212ENST00000523966 VWA5B2Q8N398 1253 aa6.53□□□□□ -1.36
SKP1-212ENST00000523966 PMEPA1Q969W9 287 aa6.53□□□□□ -1.36
SKP1-212ENST00000523966 ZNF837Q96EG3 531 aaPredicted RBP6.53□□□□□ -1.36
SKP1-212ENST00000523966 CFHR5Q9BXR6 569 aa6.53□□□□□ -1.36
SKP1-212ENST00000523966 ELP3Q9H9T3 547 aa6.53□□□□□ -1.36
SKP1-212ENST00000523966 CUEDC1Q9NWM3 386 aaPredicted RBP6.53□□□□□ -1.36
SKP1-212ENST00000523966 A6NHS1 94 aa6.52□□□□□ -1.37
SKP1-212ENST00000523966 BNIP3LO60238 219 aa6.52□□□□□ -1.37
SKP1-212ENST00000523966 CPNE3O75131 537 aaKnown RBP6.52□□□□□ -1.37
SKP1-212ENST00000523966 PHACTR2O75167 634 aa6.52□□□□□ -1.37
SKP1-212ENST00000523966 EGFRP00533 1210 aa6.52□□□□□ -1.37
SKP1-212ENST00000523966 P4HBP07237 508 aaKnown RBP6.52□□□□□ -1.37
SKP1-212ENST00000523966 FMR1Q06787 632 aaKnown RBP eCLIP6.52□□□□□ -1.37
SKP1-212ENST00000523966 DSC3Q14574 896 aa6.52□□□□□ -1.37
SKP1-212ENST00000523966 ALG1LQ6GMV1 187 aa6.52□□□□□ -1.37
SKP1-212ENST00000523966 KRT25Q7Z3Z0 450 aa6.52□□□□□ -1.37
SKP1-212ENST00000523966 SNX29Q8TEQ0 813 aa6.52□□□□□ -1.37
SKP1-212ENST00000523966 ABHD17AQ96GS6 310 aa6.52□□□□□ -1.37
SKP1-212ENST00000523966 CSRNP1Q96S65 589 aa6.52□□□□□ -1.37
SKP1-212ENST00000523966 DNAJC25Q9H1X3 360 aa6.52□□□□□ -1.37
SKP1-212ENST00000523966 EFCC1Q9HA90 598 aa6.52□□□□□ -1.37
SKP1-212ENST00000523966 PRR12Q9ULL5 1215 aa6.52□□□□□ -1.37
SKP1-212ENST00000523966 KCNMB2Q9Y691 235 aa6.52□□□□□ -1.37
SKP1-212ENST00000523966 PNMA6FA0A0J9YX94 578 aa6.51□□□□□ -1.37
SKP1-212ENST00000523966 EFSO43281 561 aa6.51□□□□□ -1.37
SKP1-212ENST00000523966 TNFRSF21O75509 655 aa6.51□□□□□ -1.37
SKP1-212ENST00000523966 SASH3O75995 380 aa6.51□□□□□ -1.37
SKP1-212ENST00000523966 ZNF16P17020 682 aaPredicted RBP6.51□□□□□ -1.37
SKP1-212ENST00000523966 FGFR3P22607 806 aa6.51□□□□□ -1.37
SKP1-212ENST00000523966 ABI2Q9NYB9 513 aaPredicted RBP6.51□□□□□ -1.37
SKP1-212ENST00000523966 PHF20L1A8MW92 1017 aa6.5□□□□□ -1.37
SKP1-212ENST00000523966 EIF1AYO14602 144 aaKnown RBP6.5□□□□□ -1.37
SKP1-212ENST00000523966 PRPF40AO75400 957 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms