RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 EDEM1Q92611 657 aa9.17□□□□□ -0.94
SKP1-208ENST00000521216 FAM13BQ9NYF5 915 aa9.17□□□□□ -0.94
SKP1-208ENST00000521216 BRPF3Q9ULD4 1205 aa9.17□□□□□ -0.94
SKP1-208ENST00000521216 RTCBQ9Y3I0 505 aaKnown RBP9.17□□□□□ -0.94
SKP1-208ENST00000521216 CD33P20138 364 aa9.16□□□□□ -0.94
SKP1-208ENST00000521216 ARHGAP4P98171 946 aa9.16□□□□□ -0.94
SKP1-208ENST00000521216 ECM1Q16610 540 aa9.16□□□□□ -0.94
SKP1-208ENST00000521216 GPR161Q8N6U8 529 aaKnown RBP9.16□□□□□ -0.94
SKP1-208ENST00000521216 TTC16Q8NEE8 873 aa9.16□□□□□ -0.94
SKP1-208ENST00000521216 TMC1Q8TDI8 760 aa9.16□□□□□ -0.94
SKP1-208ENST00000521216 STRN4Q9NRL3 753 aa9.16□□□□□ -0.94
SKP1-208ENST00000521216 CCDC87Q9NVE4 849 aa9.16□□□□□ -0.94
SKP1-208ENST00000521216 ATXN7L1Q9ULK2 861 aaPredicted RBP9.16□□□□□ -0.94
SKP1-208ENST00000521216 KCNH4Q9UQ05 1017 aa9.16□□□□□ -0.94
SKP1-208ENST00000521216 PCSK2P16519 638 aa9.15□□□□□ -0.94
SKP1-208ENST00000521216 FGFR3P22607 806 aa9.15□□□□□ -0.94
SKP1-208ENST00000521216 CFHR5Q9BXR6 569 aa9.15□□□□□ -0.94
SKP1-208ENST00000521216 NDFIP2Q9NV92 336 aa9.15□□□□□ -0.94
SKP1-208ENST00000521216 MARK1Q9P0L2 795 aa9.15□□□□□ -0.94
SKP1-208ENST00000521216 POLIQ9UNA4 740 aa9.15□□□□□ -0.94
SKP1-208ENST00000521216 ERBB4Q15303 1308 aa9.14□□□□□ -0.95
SKP1-208ENST00000521216 EFSO43281 561 aa9.14□□□□□ -0.95
SKP1-208ENST00000521216 NDUFB5O43674 189 aa9.14□□□□□ -0.95
SKP1-208ENST00000521216 FZD6O60353 706 aa9.14□□□□□ -0.95
SKP1-208ENST00000521216 C8orf34Q49A92 452 aa9.14□□□□□ -0.95
SKP1-208ENST00000521216 TMCO4Q5TGY1 634 aa9.14□□□□□ -0.95
SKP1-208ENST00000521216 IRF7Q92985 503 aa9.14□□□□□ -0.95
SKP1-208ENST00000521216 NUDT16Q96DE0 195 aaKnown RBP9.14□□□□□ -0.95
SKP1-208ENST00000521216 MX2P20592 715 aa9.13□□□□□ -0.95
SKP1-208ENST00000521216 MAPK1P28482 360 aa9.13□□□□□ -0.95
SKP1-208ENST00000521216 MZF1P28698 734 aaPredicted RBP9.13□□□□□ -0.95
SKP1-208ENST00000521216 CTBSQ01459 385 aa9.13□□□□□ -0.95
SKP1-208ENST00000521216 GRIN2CQ14957 1233 aa9.13□□□□□ -0.95
SKP1-208ENST00000521216 ZNF775Q96BV0 537 aaPredicted RBP9.13□□□□□ -0.95
SKP1-208ENST00000521216 PDGFAP04085 211 aa9.12□□□□□ -0.95
SKP1-208ENST00000521216 MARSP56192 900 aaKnown RBP9.12□□□□□ -0.95
SKP1-208ENST00000521216 LAMC2Q13753 1193 aa9.12□□□□□ -0.95
SKP1-208ENST00000521216 COL25A1Q9BXS0 654 aaPredicted RBP9.12□□□□□ -0.95
SKP1-208ENST00000521216 HCN2Q9UL51 889 aa9.12□□□□□ -0.95
SKP1-208ENST00000521216 UBAP1LF5GYI3 381 aa9.11□□□□□ -0.95
SKP1-208ENST00000521216 XYLBO75191 536 aa9.11□□□□□ -0.95
SKP1-208ENST00000521216 BMP4P12644 408 aa9.11□□□□□ -0.95
SKP1-208ENST00000521216 GRNP28799 593 aaKnown RBP9.11□□□□□ -0.95
SKP1-208ENST00000521216 NFX1Q12986 1120 aaKnown RBP9.11□□□□□ -0.95
SKP1-208ENST00000521216 CCDC27Q2M243 656 aa9.11□□□□□ -0.95
SKP1-208ENST00000521216 KRT25Q7Z3Z0 450 aa9.11□□□□□ -0.95
SKP1-208ENST00000521216 RAB44Q7Z6P3 723 aaPredicted RBP9.11□□□□□ -0.95
SKP1-208ENST00000521216 PNMA5Q96PV4 448 aa9.11□□□□□ -0.95
SKP1-208ENST00000521216 DCTN4Q9UJW0 460 aa9.11□□□□□ -0.95
SKP1-208ENST00000521216 PRR12Q9ULL5 1215 aa9.11□□□□□ -0.95
SKP1-208ENST00000521216 FNDC3AQ9Y2H6 1198 aaKnown RBP9.11□□□□□ -0.95
SKP1-208ENST00000521216 A6NHS1 94 aa9.1□□□□□ -0.95
SKP1-208ENST00000521216 WFS1O76024 890 aa9.1□□□□□ -0.95
SKP1-208ENST00000521216 KCNQ4P56696 695 aa9.1□□□□□ -0.95
SKP1-208ENST00000521216 SPEM2Q0P670 501 aa9.1□□□□□ -0.95
SKP1-208ENST00000521216 PODXL2Q9NZ53 605 aa9.1□□□□□ -0.95
SKP1-208ENST00000521216 KCNMB2Q9Y691 235 aa9.1□□□□□ -0.95
SKP1-208ENST00000521216 SASH3O75995 380 aa9.09□□□□□ -0.95
SKP1-208ENST00000521216 VSIG8P0DPA2 414 aa9.09□□□□□ -0.95
SKP1-208ENST00000521216 USP5P45974 858 aa9.09□□□□□ -0.95
SKP1-208ENST00000521216 CCINQ13939 588 aa9.09□□□□□ -0.95
SKP1-208ENST00000521216 GAS6Q14393 721 aa9.09□□□□□ -0.95
SKP1-208ENST00000521216 BHMTQ93088 406 aa9.09□□□□□ -0.95
SKP1-208ENST00000521216 SLC30A3Q99726 388 aa9.09□□□□□ -0.95
SKP1-208ENST00000521216 GGNBP2Q9H3C7 697 aa9.09□□□□□ -0.95
SKP1-208ENST00000521216 RPLP1P05386 114 aaKnown RBP9.08□□□□□ -0.96
SKP1-208ENST00000521216 NEUROD1Q13562 356 aa9.08□□□□□ -0.96
SKP1-208ENST00000521216 TRIP4Q15650 581 aaPredicted RBP9.08□□□□□ -0.96
SKP1-208ENST00000521216 RNFT1Q5M7Z0 435 aa9.08□□□□□ -0.96
SKP1-208ENST00000521216 CNTNAP3BQ96NU0 1288 aa9.08□□□□□ -0.96
SKP1-208ENST00000521216 CNTNAP3Q9BZ76 1288 aa9.08□□□□□ -0.96
SKP1-208ENST00000521216 GSX2Q9BZM3 304 aa9.08□□□□□ -0.96
SKP1-208ENST00000521216 NSFL1CQ9UNZ2 370 aaKnown RBP9.08□□□□□ -0.96
SKP1-208ENST00000521216 C2CD2LO14523 706 aa9.07□□□□□ -0.96
SKP1-208ENST00000521216 TARSP26639 723 aaKnown RBP9.07□□□□□ -0.96
SKP1-208ENST00000521216 ZNF438Q7Z4V0 828 aa9.07□□□□□ -0.96
SKP1-208ENST00000521216 MBIPQ9NS73 344 aa9.07□□□□□ -0.96
SKP1-208ENST00000521216 NFKB1P19838 968 aa9.06□□□□□ -0.96
SKP1-208ENST00000521216 PDE3BQ13370 1112 aa9.06□□□□□ -0.96
SKP1-208ENST00000521216 FAM182BQ5T319 152 aa9.06□□□□□ -0.96
SKP1-208ENST00000521216 IGFLR1Q9H665 355 aa9.06□□□□□ -0.96
SKP1-208ENST00000521216 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.06□□□□□ -0.96
SKP1-208ENST00000521216 RARAP10276 462 aa9.05□□□□□ -0.96
SKP1-208ENST00000521216 GMPRP36959 345 aa9.05□□□□□ -0.96
SKP1-208ENST00000521216 MFAP1P55081 439 aaKnown RBP9.05□□□□□ -0.96
SKP1-208ENST00000521216 PCBP4P57723 403 aaKnown RBP9.05□□□□□ -0.96
SKP1-208ENST00000521216 TMC7Q7Z402 723 aa9.05□□□□□ -0.96
SKP1-208ENST00000521216 ZSCAN29Q8IWY8 852 aaPredicted RBP9.05□□□□□ -0.96
SKP1-208ENST00000521216 GJD3Q8N144 294 aa9.05□□□□□ -0.96
SKP1-208ENST00000521216 CITED4Q96RK1 184 aa9.05□□□□□ -0.96
SKP1-208ENST00000521216 RBCK1Q9BYM8 510 aa9.05□□□□□ -0.96
SKP1-208ENST00000521216 IGF1RP08069 1367 aa9.04□□□□□ -0.96
SKP1-208ENST00000521216 KRT76Q01546 638 aa9.04□□□□□ -0.96
SKP1-208ENST00000521216 EHHADHQ08426 723 aa9.04□□□□□ -0.96
SKP1-208ENST00000521216 TBC1D8BQ0IIM8 1120 aa9.04□□□□□ -0.96
SKP1-208ENST00000521216 TTC39BQ5VTQ0 682 aaPredicted RBP9.04□□□□□ -0.96
SKP1-208ENST00000521216 TREML4Q6UXN2 200 aa9.04□□□□□ -0.96
SKP1-208ENST00000521216 SYT9Q86SS6 491 aa9.04□□□□□ -0.96
SKP1-208ENST00000521216 NLRP13Q86W25 1043 aa9.04□□□□□ -0.96
SKP1-208ENST00000521216 ELP3Q9H9T3 547 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms