RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 C7orf43Q8WVR3 580 aa10.06□□□□□ -0.8
PABPC1-216ENST00000520868 NEUROD4Q9HD90 331 aa10.06□□□□□ -0.8
PABPC1-216ENST00000520868 LRRC4BQ9NT99 713 aa10.06□□□□□ -0.8
PABPC1-216ENST00000520868 KIAA0586Q9BVV6 1533 aa10.06□□□□□ -0.8
PABPC1-216ENST00000520868 KIF27Q86VH2 1401 aa10.06□□□□□ -0.8
PABPC1-216ENST00000520868 ATAD2Q6PL18 1390 aa10.05□□□□□ -0.8
PABPC1-216ENST00000520868 TNP2Q05952 138 aa10.05□□□□□ -0.8
PABPC1-216ENST00000520868 KCTD17Q8N5Z5 321 aa10.05□□□□□ -0.8
PABPC1-216ENST00000520868 RHPN1Q8TCX5 695 aa10.05□□□□□ -0.8
PABPC1-216ENST00000520868 STRN4Q9NRL3 753 aa10.05□□□□□ -0.8
PABPC1-216ENST00000520868 C21orf2O43822 256 aa10.04□□□□□ -0.8
PABPC1-216ENST00000520868 GDF11O95390 407 aa10.04□□□□□ -0.8
PABPC1-216ENST00000520868 FAM157BP0CG42 384 aa10.04□□□□□ -0.8
PABPC1-216ENST00000520868 GRIN2CQ14957 1233 aa10.04□□□□□ -0.8
PABPC1-216ENST00000520868 LRRC69Q6ZNQ3 347 aa10.04□□□□□ -0.8
PABPC1-216ENST00000520868 GALNT6Q8NCL4 622 aa10.04□□□□□ -0.8
PABPC1-216ENST00000520868 SCG3Q8WXD2 468 aaKnown RBP10.04□□□□□ -0.8
PABPC1-216ENST00000520868 CCDC97Q96F63 343 aaPredicted RBP10.04□□□□□ -0.8
PABPC1-216ENST00000520868 HCN4Q9Y3Q4 1203 aa10.04□□□□□ -0.8
PABPC1-216ENST00000520868 PTPRGP23470 1445 aa10.04□□□□□ -0.8
PABPC1-216ENST00000520868 ADCY10Q96PN6 1610 aa10.04□□□□□ -0.8
PABPC1-216ENST00000520868 MAPKBP1O60336 1514 aa10.03□□□□□ -0.8
PABPC1-216ENST00000520868 TMEM151AQ8N4L1 468 aa10.03□□□□□ -0.8
PABPC1-216ENST00000520868 FAM200AQ8TCP9 573 aa10.03□□□□□ -0.8
PABPC1-216ENST00000520868 ARXQ96QS3 562 aa10.03□□□□□ -0.8
PABPC1-216ENST00000520868 GGA1Q9UJY5 639 aa10.03□□□□□ -0.8
PABPC1-216ENST00000520868 GDF2Q9UK05 429 aaPredicted RBP10.03□□□□□ -0.8
PABPC1-216ENST00000520868 SERPINA10Q9UK55 444 aa10.03□□□□□ -0.8
PABPC1-216ENST00000520868 CARMIL1Q5VZK9 1371 aa10.02□□□□□ -0.8
PABPC1-216ENST00000520868 RNF225M0QZC1 329 aaPredicted RBP10.02□□□□□ -0.81
PABPC1-216ENST00000520868 IGFBP4P22692 258 aa10.02□□□□□ -0.81
PABPC1-216ENST00000520868 SNRPNP63162 240 aaKnown RBP10.02□□□□□ -0.81
PABPC1-216ENST00000520868 LAMC2Q13753 1193 aa10.02□□□□□ -0.81
PABPC1-216ENST00000520868 FAM182BQ5T319 152 aa10.02□□□□□ -0.81
PABPC1-216ENST00000520868 SCARF2Q96GP6 870 aaPredicted RBP10.02□□□□□ -0.81
PABPC1-216ENST00000520868 C2orf49Q9BVC5 232 aaPredicted RBP10.02□□□□□ -0.81
PABPC1-216ENST00000520868 PHACTR1Q9C0D0 580 aa10.02□□□□□ -0.81
PABPC1-216ENST00000520868 ANKIB1Q9P2G1 1089 aa10.02□□□□□ -0.81
PABPC1-216ENST00000520868 DIP2BQ9P265 1576 aa10.01□□□□□ -0.81
PABPC1-216ENST00000520868 HIF1AQ16665 826 aa10.01□□□□□ -0.81
PABPC1-216ENST00000520868 GOLGA6L1Q8N7Z2 621 aa10.01□□□□□ -0.81
PABPC1-216ENST00000520868 KLF15Q9UIH9 416 aa10.01□□□□□ -0.81
PABPC1-216ENST00000520868 DNMT3AQ9Y6K1 912 aaPredicted RBP10.01□□□□□ -0.81
PABPC1-216ENST00000520868 CDCA8Q53HL2 280 aa10□□□□□ -0.81
PABPC1-216ENST00000520868 EDARADDQ8WWZ3 215 aa10□□□□□ -0.81
PABPC1-216ENST00000520868 HSH2DQ96JZ2 352 aa10□□□□□ -0.81
PABPC1-216ENST00000520868 TNIKQ9UKE5 1360 aa10□□□□□ -0.81
PABPC1-216ENST00000520868 NEURL1BA8MQ27 555 aa9.99□□□□□ -0.81
PABPC1-216ENST00000520868 EFSO43281 561 aa9.99□□□□□ -0.81
PABPC1-216ENST00000520868 ALDH16A1Q8IZ83 802 aa9.99□□□□□ -0.81
PABPC1-216ENST00000520868 MARK1Q9P0L2 795 aa9.99□□□□□ -0.81
PABPC1-216ENST00000520868 NOVA2Q9UNW9 492 aaKnown RBP9.99□□□□□ -0.81
PABPC1-216ENST00000520868 CARMIL2Q6F5E8 1435 aa9.99□□□□□ -0.81
PABPC1-216ENST00000520868 KDM6BO15054 1643 aa9.98□□□□□ -0.81
PABPC1-216ENST00000520868 ARAFP10398 606 aa9.98□□□□□ -0.81
PABPC1-216ENST00000520868 ELOAQ14241 798 aaKnown RBP9.98□□□□□ -0.81
PABPC1-216ENST00000520868 CUL7Q14999 1698 aa9.98□□□□□ -0.81
PABPC1-216ENST00000520868 TSPOAP1O95153 1857 aa9.98□□□□□ -0.81
PABPC1-216ENST00000520868 HOXB4P17483 251 aaPredicted RBP9.97□□□□□ -0.81
PABPC1-216ENST00000520868 SFSWAPQ12872 951 aaKnown RBP9.97□□□□□ -0.81
PABPC1-216ENST00000520868 SLCO4C1Q6ZQN7 724 aa9.97□□□□□ -0.81
PABPC1-216ENST00000520868 C14orf37Q86TY3 774 aa9.97□□□□□ -0.81
PABPC1-216ENST00000520868 ZNF280CQ8ND82 737 aa9.97□□□□□ -0.81
PABPC1-216ENST00000520868 AVENQ9NQS1 362 aaPredicted RBP9.97□□□□□ -0.81
PABPC1-216ENST00000520868 FOXO3O43524 673 aa9.96□□□□□ -0.82
PABPC1-216ENST00000520868 PCBP4P57723 403 aaKnown RBP9.96□□□□□ -0.82
PABPC1-216ENST00000520868 SWI5Q1ZZU3 235 aa9.96□□□□□ -0.82
PABPC1-216ENST00000520868 FCHSD1Q86WN1 690 aa9.96□□□□□ -0.82
PABPC1-216ENST00000520868 RRAGCQ9HB90 399 aa9.96□□□□□ -0.82
PABPC1-216ENST00000520868 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.95□□□□□ -0.82
PABPC1-216ENST00000520868 EPXP11678 715 aa9.95□□□□□ -0.82
PABPC1-216ENST00000520868 WEE1P30291 646 aa9.95□□□□□ -0.82
PABPC1-216ENST00000520868 RTN1Q16799 776 aa9.95□□□□□ -0.82
PABPC1-216ENST00000520868 KANK3Q6NY19 840 aa9.95□□□□□ -0.82
PABPC1-216ENST00000520868 VTI1AQ96AJ9 217 aa9.95□□□□□ -0.82
PABPC1-216ENST00000520868 PBXIP1Q96AQ6 731 aa9.95□□□□□ -0.82
PABPC1-216ENST00000520868 NGLY1Q96IV0 654 aa9.95□□□□□ -0.82
PABPC1-216ENST00000520868 SUSD3Q96L08 255 aa9.95□□□□□ -0.82
PABPC1-216ENST00000520868 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.95□□□□□ -0.824e-12■□□□□ 10.7
PABPC1-216ENST00000520868 ACIN1Q9UKV3 1341 aaKnown RBP9.95□□□□□ -0.82
PABPC1-216ENST00000520868 ASXL2Q76L83 1435 aa9.95□□□□□ -0.82
PABPC1-216ENST00000520868 ABCC2Q92887 1545 aa9.95□□□□□ -0.82
PABPC1-216ENST00000520868 ATG7O95352 703 aa9.94□□□□□ -0.82
PABPC1-216ENST00000520868 SRPK2P78362 688 aaKnown RBP9.94□□□□□ -0.82
PABPC1-216ENST00000520868 PODNQ7Z5L7 613 aa9.94□□□□□ -0.82
PABPC1-216ENST00000520868 BEND7Q8N7W2 519 aaPredicted RBP9.94□□□□□ -0.82
PABPC1-216ENST00000520868 PRR12Q9ULL5 1215 aa9.94□□□□□ -0.82
PABPC1-216ENST00000520868 PLB1Q6P1J6 1458 aa9.93□□□□□ -0.82
PABPC1-216ENST00000520868 UACAQ9BZF9 1416 aa9.93□□□□□ -0.82
PABPC1-216ENST00000520868 ARID3CA6NKF2 412 aa9.93□□□□□ -0.82
PABPC1-216ENST00000520868 AMPD1P23109 780 aa9.93□□□□□ -0.82
PABPC1-216ENST00000520868 ADH6P28332 368 aa9.93□□□□□ -0.82
PABPC1-216ENST00000520868 ERICH6Q7L0X2 663 aa9.93□□□□□ -0.82
PABPC1-216ENST00000520868 BTBD6Q96KE9 485 aa9.93□□□□□ -0.82
PABPC1-216ENST00000520868 CEP63Q96MT8 703 aa9.93□□□□□ -0.82
PABPC1-216ENST00000520868 SLC30A3Q99726 388 aa9.93□□□□□ -0.82
PABPC1-216ENST00000520868 PHF20L1A8MW92 1017 aa9.92□□□□□ -0.82
PABPC1-216ENST00000520868 ZNF468Q5VIY5 522 aaPredicted RBP9.92□□□□□ -0.82
PABPC1-216ENST00000520868 RAB44Q7Z6P3 723 aaPredicted RBP9.92□□□□□ -0.82
PABPC1-216ENST00000520868 DCAF5Q96JK2 942 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms