RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TEX13AQ9BXU3 409 aaPredicted RBP12.4□□□□□ -0.42
CTNNA1-221ENST00000520339 KCPQ6ZWJ8 1503 aa12.4□□□□□ -0.42
CTNNA1-221ENST00000520339 CEMIPQ8WUJ3 1361 aa12.4□□□□□ -0.42
CTNNA1-221ENST00000520339 MYH14Q7Z406 1995 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-221ENST00000520339 KCNQ3O43525 872 aa12.39□□□□□ -0.43
CTNNA1-221ENST00000520339 U2AF1L5P0DN76 240 aaPredicted RBP12.39□□□□□ -0.43
CTNNA1-221ENST00000520339 CHRNA5P30532 468 aa12.39□□□□□ -0.43
CTNNA1-221ENST00000520339 U2AF1Q01081 240 aaKnown RBP eCLIP12.39□□□□□ -0.43
CTNNA1-221ENST00000520339 MAP2K5Q13163 448 aa12.39□□□□□ -0.43
CTNNA1-221ENST00000520339 HIC1Q14526 733 aa12.39□□□□□ -0.43
CTNNA1-221ENST00000520339 DALRD3Q5D0E6 543 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-221ENST00000520339 KDM4CQ9H3R0 1056 aa12.39□□□□□ -0.43
CTNNA1-221ENST00000520339 COL15A1P39059 1388 aa12.39□□□□□ -0.43
CTNNA1-221ENST00000520339 A0A087WZG4 1122 aa12.38□□□□□ -0.43
CTNNA1-221ENST00000520339 IRF6O14896 467 aa12.38□□□□□ -0.43
CTNNA1-221ENST00000520339 SERPINB2P05120 415 aa12.38□□□□□ -0.43
CTNNA1-221ENST00000520339 FMNL2Q96PY5 1086 aa12.38□□□□□ -0.43
CTNNA1-221ENST00000520339 HEG1Q9ULI3 1381 aa12.38□□□□□ -0.43
CTNNA1-221ENST00000520339 COL5A3P25940 1745 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-221ENST00000520339 BTBD11A6QL63 1104 aa12.37□□□□□ -0.43
CTNNA1-221ENST00000520339 IL27Q8NEV9 243 aa12.37□□□□□ -0.43
CTNNA1-221ENST00000520339 CCDC102AQ96A19 550 aa12.37□□□□□ -0.43
CTNNA1-221ENST00000520339 ADAMTS7Q9UKP4 1686 aa12.36□□□□□ -0.43
CTNNA1-221ENST00000520339 A1BGP04217 495 aa12.36□□□□□ -0.43
CTNNA1-221ENST00000520339 FECHP22830 423 aa12.36□□□□□ -0.43
CTNNA1-221ENST00000520339 IL6STP40189 918 aaPredicted RBP12.36□□□□□ -0.43
CTNNA1-221ENST00000520339 C9orf131Q5VYM1 1079 aa12.36□□□□□ -0.43
CTNNA1-221ENST00000520339 ERICH6Q7L0X2 663 aa12.36□□□□□ -0.43
CTNNA1-221ENST00000520339 PCDHGA4Q9Y5G9 962 aa12.36□□□□□ -0.43
CTNNA1-221ENST00000520339 C4AP0C0L4 1744 aa12.36□□□□□ -0.43
CTNNA1-221ENST00000520339 TJP1Q07157 1748 aa12.35□□□□□ -0.43
CTNNA1-221ENST00000520339 HTATSF1O43719 755 aaKnown RBP12.35□□□□□ -0.43
CTNNA1-221ENST00000520339 PTGDRQ13258 359 aa12.35□□□□□ -0.43
CTNNA1-221ENST00000520339 TBC1D9BQ66K14 1250 aa12.35□□□□□ -0.43
CTNNA1-221ENST00000520339 MCM10Q7L590 875 aa12.35□□□□□ -0.43
CTNNA1-221ENST00000520339 TBC1D2BQ9UPU7 963 aa12.35□□□□□ -0.43
CTNNA1-221ENST00000520339 USP16Q9Y5T5 823 aa12.35□□□□□ -0.43
CTNNA1-221ENST00000520339 SCN11AQ9UI33 1791 aa12.35□□□□□ -0.43
CTNNA1-221ENST00000520339 DCTN1Q14203 1278 aa12.34□□□□□ -0.43
CTNNA1-221ENST00000520339 BICDL1Q6ZP65 573 aa12.34□□□□□ -0.43
CTNNA1-221ENST00000520339 RTF1Q92541 710 aaKnown RBP12.34□□□□□ -0.43
CTNNA1-221ENST00000520339 EPAS1Q99814 870 aa12.34□□□□□ -0.43
CTNNA1-221ENST00000520339 CAMTA2O94983 1202 aa12.33□□□□□ -0.44
CTNNA1-221ENST00000520339 HSPA6P17066 643 aa12.33□□□□□ -0.44
CTNNA1-221ENST00000520339 C2CD5Q86YS7 1000 aa12.33□□□□□ -0.44
CTNNA1-221ENST00000520339 PRAMEF22A3QJZ6 481 aa12.32□□□□□ -0.44
CTNNA1-221ENST00000520339 MAP3K7O43318 606 aa12.32□□□□□ -0.44
CTNNA1-221ENST00000520339 SNRPA1P09661 255 aaKnown RBP12.32□□□□□ -0.44
CTNNA1-221ENST00000520339 TTLL6Q8N841 843 aa12.32□□□□□ -0.44
CTNNA1-221ENST00000520339 BRIP1Q9BX63 1249 aa12.32□□□□□ -0.44
CTNNA1-221ENST00000520339 NMRK2Q9NPI5 230 aa12.32□□□□□ -0.44
CTNNA1-221ENST00000520339 DAXXQ9UER7 740 aaPredicted RBP12.32□□□□□ -0.44
CTNNA1-221ENST00000520339 ZNF330Q9Y3S2 320 aaPredicted RBP12.32□□□□□ -0.44
CTNNA1-221ENST00000520339 KIF13BQ9NQT8 1826 aa12.32□□□□□ -0.44
CTNNA1-221ENST00000520339 KIAA1551Q9HCM1 1747 aa12.31□□□□□ -0.44
CTNNA1-221ENST00000520339 H0YIN7 160 aa12.31□□□□□ -0.44
CTNNA1-221ENST00000520339 TAF7Q15545 349 aaPredicted RBP12.31□□□□□ -0.44
CTNNA1-221ENST00000520339 PRR5LQ6MZQ0 368 aa12.31□□□□□ -0.44
CTNNA1-221ENST00000520339 PLEKHF1Q96S99 279 aa12.31□□□□□ -0.44
CTNNA1-221ENST00000520339 RNF181Q9P0P0 153 aa12.31□□□□□ -0.44
CTNNA1-221ENST00000520339 PCDHGA10Q9Y5H3 936 aa12.31□□□□□ -0.44
CTNNA1-221ENST00000520339 CARMIL3Q8ND23 1372 aa12.3□□□□□ -0.44
CTNNA1-221ENST00000520339 TOMM70O94826 608 aa12.3□□□□□ -0.44
CTNNA1-221ENST00000520339 PIP4K2AP48426 406 aaPredicted RBP12.3□□□□□ -0.44
CTNNA1-221ENST00000520339 NPM2Q86SE8 214 aaKnown RBP12.3□□□□□ -0.44
CTNNA1-221ENST00000520339 DZIP3Q86Y13 1208 aaKnown RBP12.3□□□□□ -0.44
CTNNA1-221ENST00000520339 SETDB2Q96T68 719 aa12.3□□□□□ -0.44
CTNNA1-221ENST00000520339 CDHR5Q9HBB8 845 aa12.3□□□□□ -0.44
CTNNA1-221ENST00000520339 PDZRN3Q9UPQ7 1066 aa12.3□□□□□ -0.44
CTNNA1-221ENST00000520339 NBPF26B4DH59 902 aa12.29□□□□□ -0.44
CTNNA1-221ENST00000520339 PRELPP51888 382 aa12.29□□□□□ -0.44
CTNNA1-221ENST00000520339 RASSF7Q02833 373 aa12.29□□□□□ -0.44
CTNNA1-221ENST00000520339 NBPF10Q6P3W6 841 aaKnown RBP12.29□□□□□ -0.44
CTNNA1-221ENST00000520339 CLEC4GQ6UXB4 293 aa12.29□□□□□ -0.44
CTNNA1-221ENST00000520339 CCDC24Q8N4L8 307 aa12.29□□□□□ -0.44
CTNNA1-221ENST00000520339 NBPF15Q8N660 670 aa12.29□□□□□ -0.44
CTNNA1-221ENST00000520339 SLAIN1Q8ND83 568 aa12.29□□□□□ -0.44
CTNNA1-221ENST00000520339 MIS18AQ9NYP9 233 aa12.29□□□□□ -0.44
CTNNA1-221ENST00000520339 PDE6BP35913 854 aa12.28□□□□□ -0.44
CTNNA1-221ENST00000520339 TYW1BQ6NUM6 668 aa12.28□□□□□ -0.44
CTNNA1-221ENST00000520339 ZNF622Q969S3 477 aaKnown RBP eCLIP12.28□□□□□ -0.44
CTNNA1-221ENST00000520339 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
CTNNA1-221ENST00000520339 NFKBIEO00221 500 aa12.27□□□□□ -0.45
CTNNA1-221ENST00000520339 NEFMP07197 916 aa12.27□□□□□ -0.45
CTNNA1-221ENST00000520339 LMNB1P20700 586 aa12.27□□□□□ -0.45
CTNNA1-221ENST00000520339 ZEB1P37275 1124 aaPredicted RBP12.27□□□□□ -0.45
CTNNA1-221ENST00000520339 NFE2L2Q16236 605 aa12.27□□□□□ -0.45
CTNNA1-221ENST00000520339 AMHR2Q16671 573 aa12.27□□□□□ -0.45
CTNNA1-221ENST00000520339 CNBD1Q8NA66 436 aa12.27□□□□□ -0.45
CTNNA1-221ENST00000520339 PNISRQ8TF01 805 aaKnown RBP12.27□□□□□ -0.45
CTNNA1-221ENST00000520339 NPDC1Q9NQX5 325 aaPredicted RBP12.27□□□□□ -0.45
CTNNA1-221ENST00000520339 TSR1Q2NL82 804 aaKnown RBP12.26□□□□□ -0.45
CTNNA1-221ENST00000520339 RBM46Q8TBY0 533 aaKnown RBP12.26□□□□□ -0.45
CTNNA1-221ENST00000520339 RRAGCQ9HB90 399 aa12.26□□□□□ -0.45
CTNNA1-221ENST00000520339 KDM2BQ8NHM5 1336 aa12.26□□□□□ -0.45
CTNNA1-221ENST00000520339 ZC3H4Q9UPT8 1303 aaKnown RBP12.26□□□□□ -0.45
CTNNA1-221ENST00000520339 UBR2Q8IWV8 1755 aa12.25□□□□□ -0.45
CTNNA1-221ENST00000520339 C21orf2O43822 256 aa12.25□□□□□ -0.45
CTNNA1-221ENST00000520339 POTEJP0CG39 1038 aa12.25□□□□□ -0.45
CTNNA1-221ENST00000520339 SRGNP10124 158 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms