RNA–Protein interactions for RNA: ENST00000514170.5

CNGA1-207, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CNGA1, Length 2,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-207ENST00000514170 IFNL2Q8IZJ0 200 aa6.82□□□□□ -1.32
CNGA1-207ENST00000514170 ZNF496Q96IT1 587 aaPredicted RBP6.82□□□□□ -1.32
CNGA1-207ENST00000514170 TRERF1Q96PN7 1200 aa6.82□□□□□ -1.32
CNGA1-207ENST00000514170 RBSNQ9H1K0 784 aa6.82□□□□□ -1.32
CNGA1-207ENST00000514170 RWDD1Q9H446 243 aaPredicted RBP6.82□□□□□ -1.32
CNGA1-207ENST00000514170 TBC1D2BQ9UPU7 963 aa6.82□□□□□ -1.32
CNGA1-207ENST00000514170 SLIT2O94813 1529 aa6.81□□□□□ -1.32
CNGA1-207ENST00000514170 CDK12Q9NYV4 1490 aaPredicted RBP6.81□□□□□ -1.32
CNGA1-207ENST00000514170 NPHP1O15259 732 aa6.81□□□□□ -1.32
CNGA1-207ENST00000514170 ZSCAN23Q3MJ62 389 aa6.81□□□□□ -1.32
CNGA1-207ENST00000514170 RNF217Q8TC41 542 aa6.81□□□□□ -1.32
CNGA1-207ENST00000514170 CFAP44Q96MT7 982 aa6.81□□□□□ -1.32
CNGA1-207ENST00000514170 PUS7Q96PZ0 661 aaKnown RBP6.81□□□□□ -1.32
CNGA1-207ENST00000514170 ATF5Q9Y2D1 282 aaPredicted RBP6.81□□□□□ -1.32
CNGA1-207ENST00000514170 GLI3P10071 1580 aa6.81□□□□□ -1.32
CNGA1-207ENST00000514170 BAG4O95429 457 aaKnown RBP6.81□□□□□ -1.32
CNGA1-207ENST00000514170 SLC4A10Q6U841 1118 aa6.81□□□□□ -1.32
CNGA1-207ENST00000514170 DNAJC10Q8IXB1 793 aa6.81□□□□□ -1.32
CNGA1-207ENST00000514170 RUNDC1Q96C34 613 aa6.81□□□□□ -1.32
CNGA1-207ENST00000514170 LRRC4BQ9NT99 713 aa6.81□□□□□ -1.32
CNGA1-207ENST00000514170 ZNF219Q9P2Y4 722 aaPredicted RBP6.81□□□□□ -1.32
CNGA1-207ENST00000514170 TRIM35Q9UPQ4 493 aa6.81□□□□□ -1.32
CNGA1-207ENST00000514170 CPDO75976 1380 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 NPC1L1Q9UHC9 1359 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 BCAR3O75815 825 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 GPTP24298 496 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 PROSER3Q2NL68 480 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 PIBF1Q8WXW3 757 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 ZBTB3Q9H5J0 574 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 TFCP2L1Q9NZI6 479 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 CCNL1Q9UK58 526 aaPredicted RBP6.8□□□□□ -1.32
CNGA1-207ENST00000514170 USP16Q9Y5T5 823 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 PCDH11XQ9BZA7 1347 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 PCDH11YQ9BZA8 1340 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 NSD2O96028 1365 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 GOLIM4O00461 696 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 GNPATO15228 680 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 MAP2K1Q02750 393 aaPredicted RBP6.8□□□□□ -1.32
CNGA1-207ENST00000514170 EXOSC9Q06265 439 aaKnown RBP6.8□□□□□ -1.32
CNGA1-207ENST00000514170 OS9Q13438 667 aaPredicted RBP6.8□□□□□ -1.32
CNGA1-207ENST00000514170 NFE2L2Q16236 605 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 ICE2Q659A1 982 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 SLC51AQ86UW1 340 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 CREBRFQ8IUR6 639 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 PLEKHF1Q96S99 279 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 MBIPQ9NS73 344 aa6.8□□□□□ -1.32
CNGA1-207ENST00000514170 ERICH4A6NGS2 130 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 F6X3S4 739 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 RNMTO43148 476 aaKnown RBP6.79□□□□□ -1.32
CNGA1-207ENST00000514170 CTR9Q6PD62 1173 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 C8orf58Q8NAV2 365 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 SRP68Q9UHB9 627 aaKnown RBP6.79□□□□□ -1.32
CNGA1-207ENST00000514170 SLIT3O75094 1523 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 KIF16BQ96L93 1317 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 FCHSD2O94868 740 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 GUCY2CP25092 1073 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 RAD51AP2Q09MP3 1159 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 SYCP1Q15431 976 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 LRSAM1Q6UWE0 723 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 SLC4A9Q96Q91 983 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 TMX1Q9H3N1 280 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 SPTLC3Q9NUV7 552 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 SHPRHQ149N8 1683 aa6.79□□□□□ -1.32
CNGA1-207ENST00000514170 K7ELQ4 463 aaPredicted RBP6.78□□□□□ -1.32
CNGA1-207ENST00000514170 FKBP5Q13451 457 aaPredicted RBP6.78□□□□□ -1.32
CNGA1-207ENST00000514170 TPRNQ4KMQ1 711 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 SGSM3Q96HU1 749 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 BRMS1Q9HCU9 246 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 DONSONQ9NYP3 566 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 RAI14Q9P0K7 980 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 DDX41Q9UJV9 622 aaKnown RBP6.78□□□□□ -1.32
CNGA1-207ENST00000514170 COG6Q9Y2V7 657 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 BRWD3Q6RI45 1802 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 KDM6AO15550 1401 aaPredicted RBP6.78□□□□□ -1.32
CNGA1-207ENST00000514170 DNAH12Q6ZR08 3092 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 ATP5J2-PTCD1G3V325 749 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 SSFA2P28290 1259 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 NUCB2P80303 420 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 ITPK1Q13572 414 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 FAM196AQ6ZSG2 479 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 DIAPH3Q9NSV4 1193 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 CTNNA3Q9UI47 895 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 PCDHB15Q9Y5E8 787 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 MORC2Q9Y6X9 1032 aaPredicted RBP6.78□□□□□ -1.32
CNGA1-207ENST00000514170 COL3A1P02461 1466 aaPredicted RBP6.78□□□□□ -1.32
CNGA1-207ENST00000514170 MAP3K5Q99683 1374 aa6.78□□□□□ -1.32
CNGA1-207ENST00000514170 APBB1O00213 710 aa6.77□□□□□ -1.32
CNGA1-207ENST00000514170 CTIFO43310 598 aaKnown RBP6.77□□□□□ -1.32
CNGA1-207ENST00000514170 HNRNPH2P55795 449 aaKnown RBP6.77□□□□□ -1.32
CNGA1-207ENST00000514170 GAS2L2Q8NHY3 880 aa6.77□□□□□ -1.32
CNGA1-207ENST00000514170 PHAXQ9H814 394 aaKnown RBP6.77□□□□□ -1.32
CNGA1-207ENST00000514170 ATG3Q9NT62 314 aa6.77□□□□□ -1.32
CNGA1-207ENST00000514170 LMBRD1Q9NUN5 540 aa6.77□□□□□ -1.32
CNGA1-207ENST00000514170 ZBTB1Q9Y2K1 713 aa6.77□□□□□ -1.32
CNGA1-207ENST00000514170 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.77□□□□□ -1.32
CNGA1-207ENST00000514170 LOC102724428A0A0B4J2F2 783 aa6.77□□□□□ -1.33
CNGA1-207ENST00000514170 CYP2E1P05181 493 aaPredicted RBP6.77□□□□□ -1.33
CNGA1-207ENST00000514170 SIK1P57059 783 aa6.77□□□□□ -1.33
CNGA1-207ENST00000514170 NOLC1Q14978 699 aaKnown RBP eCLIP6.77□□□□□ -1.33
CNGA1-207ENST00000514170 AKAP4Q5JQC9 854 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms