RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 SH3TC1Q8TE82 1336 aa18.47■□□□□ 0.55
SNF8-212ENST00000514089 TRIM28Q13263 835 aaKnown RBP18.46■□□□□ 0.55
SNF8-212ENST00000514089 DALRD3Q5D0E6 543 aaKnown RBP18.46■□□□□ 0.55
SNF8-212ENST00000514089 F6X3S4 739 aa18.45■□□□□ 0.54
SNF8-212ENST00000514089 NTSR2O95665 410 aa18.45■□□□□ 0.54
SNF8-212ENST00000514089 RARSP54136 660 aaKnown RBP18.45■□□□□ 0.54
SNF8-212ENST00000514089 RPGRQ92834 1020 aaKnown RBP18.45■□□□□ 0.54
SNF8-212ENST00000514089 FAM89AQ96GI7 184 aa18.45■□□□□ 0.54
SNF8-212ENST00000514089 C10orf71Q711Q0 1435 aa18.45■□□□□ 0.54
SNF8-212ENST00000514089 PTPRCP08575 1304 aa18.45■□□□□ 0.54
SNF8-212ENST00000514089 IPO8O15397 1037 aaKnown RBP18.44■□□□□ 0.54
SNF8-212ENST00000514089 GRIN3BO60391 1043 aa18.44■□□□□ 0.54
SNF8-212ENST00000514089 NOB1Q9ULX3 412 aaKnown RBP18.44■□□□□ 0.54
SNF8-212ENST00000514089 RNF123Q5XPI4 1314 aa18.44■□□□□ 0.54
SNF8-212ENST00000514089 C4AP0C0L4 1744 aa18.43■□□□□ 0.54
SNF8-212ENST00000514089 HCLS1P14317 486 aaPredicted RBP18.43■□□□□ 0.54
SNF8-212ENST00000514089 CWF19L2Q2TBE0 894 aaKnown RBP18.43■□□□□ 0.54
SNF8-212ENST00000514089 TTLL6Q8N841 843 aa18.43■□□□□ 0.54
SNF8-212ENST00000514089 ZBTB38Q8NAP3 1195 aaPredicted RBP18.43■□□□□ 0.54
SNF8-212ENST00000514089 LINS1Q8NG48 757 aa18.43■□□□□ 0.54
SNF8-212ENST00000514089 FRAT1Q92837 279 aaPredicted RBP18.43■□□□□ 0.54
SNF8-212ENST00000514089 MASTLQ96GX5 879 aa18.43■□□□□ 0.54
SNF8-212ENST00000514089 ADCY9O60503 1353 aa18.42■□□□□ 0.54
SNF8-212ENST00000514089 IRS4O14654 1257 aaPredicted RBP18.42■□□□□ 0.54
SNF8-212ENST00000514089 NPR1P16066 1061 aa18.42■□□□□ 0.54
SNF8-212ENST00000514089 CNKSR1Q969H4 720 aa18.42■□□□□ 0.54
SNF8-212ENST00000514089 NEURL1BA8MQ27 555 aa18.41■□□□□ 0.54
SNF8-212ENST00000514089 IGKV5-2P06315 115 aa18.41■□□□□ 0.54
SNF8-212ENST00000514089 SLC10A5Q5PT55 438 aa18.41■□□□□ 0.54
SNF8-212ENST00000514089 SYNE4Q8N205 404 aa18.41■□□□□ 0.54
SNF8-212ENST00000514089 JARID2Q92833 1246 aaPredicted RBP18.41■□□□□ 0.54
SNF8-212ENST00000514089 RBM17Q96I25 401 aaKnown RBP18.41■□□□□ 0.54
SNF8-212ENST00000514089 API5Q9BZZ5 524 aaKnown RBP18.41■□□□□ 0.54
SNF8-212ENST00000514089 SRCIN1Q9C0H9 1055 aa18.41■□□□□ 0.54
SNF8-212ENST00000514089 TMX4Q9H1E5 349 aaPredicted RBP18.41■□□□□ 0.54
SNF8-212ENST00000514089 IBTKQ9P2D0 1353 aaPredicted RBP18.41■□□□□ 0.54
SNF8-212ENST00000514089 SRGNP10124 158 aa18.4■□□□□ 0.54
SNF8-212ENST00000514089 KCNA3P22001 575 aa18.4■□□□□ 0.54
SNF8-212ENST00000514089 ALDH1B1P30837 517 aa18.4■□□□□ 0.54
SNF8-212ENST00000514089 STYK1Q6J9G0 422 aa18.4■□□□□ 0.54
SNF8-212ENST00000514089 C9orf78Q9NZ63 289 aaPredicted RBP18.4■□□□□ 0.54
SNF8-212ENST00000514089 ZNF219Q9P2Y4 722 aaPredicted RBP18.4■□□□□ 0.54
SNF8-212ENST00000514089 KIF16BQ96L93 1317 aa18.4■□□□□ 0.54
SNF8-212ENST00000514089 BCAR3O75815 825 aa18.39■□□□□ 0.53
SNF8-212ENST00000514089 PCCAP05165 728 aaPredicted RBP18.39■□□□□ 0.53
SNF8-212ENST00000514089 GCKRQ14397 625 aa18.39■□□□□ 0.53
SNF8-212ENST00000514089 ARHGAP27Q6ZUM4 889 aa18.39■□□□□ 0.53
SNF8-212ENST00000514089 SCN7AQ01118 1682 aa18.38■□□□□ 0.53
SNF8-212ENST00000514089 BEND3Q5T5X7 828 aa18.38■□□□□ 0.53
SNF8-212ENST00000514089 DDX46Q7L014 1031 aaKnown RBP18.38■□□□□ 0.53
SNF8-212ENST00000514089 PXDNLA1KZ92 1463 aa18.38■□□□□ 0.53
SNF8-212ENST00000514089 KLRG2A4D1S0 409 aaPredicted RBP18.37■□□□□ 0.53
SNF8-212ENST00000514089 ALDH1L1O75891 902 aa18.37■□□□□ 0.53
SNF8-212ENST00000514089 YBX3P16989 372 aaKnown RBP eCLIP18.37■□□□□ 0.532e-6■■□□□ 12.9
SNF8-212ENST00000514089 BRPF1P55201 1214 aaPredicted RBP18.37■□□□□ 0.53
SNF8-212ENST00000514089 UBE3BQ7Z3V4 1068 aa18.37■□□□□ 0.53
SNF8-212ENST00000514089 ABCC12Q96J65 1359 aa18.37■□□□□ 0.53
SNF8-212ENST00000514089 PDE8AO60658 829 aa18.36■□□□□ 0.53
SNF8-212ENST00000514089 CCT4P50991 539 aaKnown RBP18.35■□□□□ 0.53
SNF8-212ENST00000514089 ZKSCAN2Q63HK3 967 aa18.35■□□□□ 0.53
SNF8-212ENST00000514089 ARHGAP45Q92619 1136 aa18.35■□□□□ 0.53
SNF8-212ENST00000514089 H7C1W4 665 aa18.34■□□□□ 0.53
SNF8-212ENST00000514089 C21orf2O43822 256 aa18.34■□□□□ 0.53
SNF8-212ENST00000514089 CRY2Q49AN0 593 aa18.34■□□□□ 0.53
SNF8-212ENST00000514089 CCDC152Q4G0S7 254 aa18.34■□□□□ 0.53
SNF8-212ENST00000514089 PRPF40BQ6NWY9 871 aaKnown RBP18.34■□□□□ 0.53
SNF8-212ENST00000514089 C3orf67Q6ZVT6 689 aa18.34■□□□□ 0.53
SNF8-212ENST00000514089 CCDC85AQ96PX6 553 aaPredicted RBP18.34■□□□□ 0.53
SNF8-212ENST00000514089 RCAN3Q9UKA8 241 aa18.34■□□□□ 0.53
SNF8-212ENST00000514089 COL24A1Q17RW2 1714 aa18.33■□□□□ 0.52
SNF8-212ENST00000514089 GRM8O00222 908 aa18.33■□□□□ 0.52
SNF8-212ENST00000514089 SOGA3Q5TF21 947 aa18.33■□□□□ 0.52
SNF8-212ENST00000514089 ATF7IPQ6VMQ6 1270 aa18.33■□□□□ 0.52
SNF8-212ENST00000514089 FTSJ3Q8IY81 847 aaKnown RBP18.33■□□□□ 0.52
SNF8-212ENST00000514089 CRAMP1Q96RY5 1269 aa18.33■□□□□ 0.52
SNF8-212ENST00000514089 HOXA10P31260 410 aaPredicted RBP18.32■□□□□ 0.52
SNF8-212ENST00000514089 SF3B3Q15393 1217 aaKnown RBP18.32■□□□□ 0.52
SNF8-212ENST00000514089 CLUAP1Q96AJ1 413 aa18.32■□□□□ 0.52
SNF8-212ENST00000514089 CHMP3Q9Y3E7 222 aa18.32■□□□□ 0.52
SNF8-212ENST00000514089 BCORQ6W2J9 1755 aa18.32■□□□□ 0.52
SNF8-212ENST00000514089 CDHR2Q9BYE9 1310 aa18.31■□□□□ 0.52
SNF8-212ENST00000514089 BBOX1O75936 387 aa18.31■□□□□ 0.52
SNF8-212ENST00000514089 PPEF1O14829 653 aaPredicted RBP18.3■□□□□ 0.52
SNF8-212ENST00000514089 CTSWP56202 376 aa18.3■□□□□ 0.52
SNF8-212ENST00000514089 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.3■□□□□ 0.52
SNF8-212ENST00000514089 HDAC5Q9UQL6 1122 aa18.3■□□□□ 0.52
SNF8-212ENST00000514089 MS4A1P11836 297 aa18.29■□□□□ 0.52
SNF8-212ENST00000514089 GRAPQ13588 217 aa18.29■□□□□ 0.52
SNF8-212ENST00000514089 CCDC93Q567U6 631 aa18.29■□□□□ 0.52
SNF8-212ENST00000514089 GRAPLQ8TC17 118 aaPredicted RBP18.29■□□□□ 0.52
SNF8-212ENST00000514089 TRIM27P14373 513 aa18.28■□□□□ 0.52
SNF8-212ENST00000514089 CC2D2BQ6DHV5 1058 aa18.28■□□□□ 0.52
SNF8-212ENST00000514089 RTKN2Q8IZC4 609 aa18.28■□□□□ 0.52
SNF8-212ENST00000514089 RIC1Q4ADV7 1423 aa18.28■□□□□ 0.52
SNF8-212ENST00000514089 ABCC4O15439 1325 aa18.27■□□□□ 0.52
SNF8-212ENST00000514089 UBTFL1P0CB47 393 aaPredicted RBP18.27■□□□□ 0.52
SNF8-212ENST00000514089 RPS8P62241 208 aaKnown RBP18.27■□□□□ 0.52
SNF8-212ENST00000514089 TAF7LQ5H9L4 462 aa18.27■□□□□ 0.52
SNF8-212ENST00000514089 ANKRD18AQ8IVF6 992 aa18.27■□□□□ 0.52
SNF8-212ENST00000514089 DZIP1LQ8IYY4 767 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms