RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 QTRT2Q9H974 415 aaKnown RBP15.86■□□□□ 0.13
PVT1-203ENST00000513868 STAP2Q9UGK3 403 aa15.86■□□□□ 0.13
PVT1-203ENST00000513868 MSH5O43196 834 aa15.86■□□□□ 0.13
PVT1-203ENST00000513868 SEPT12Q8IYM1 358 aa15.86■□□□□ 0.13
PVT1-203ENST00000513868 ERVV-1B6SEH8 477 aa15.85■□□□□ 0.13
PVT1-203ENST00000513868 MX1P20591 662 aa15.85■□□□□ 0.13
PVT1-203ENST00000513868 DZIP3Q86Y13 1208 aaKnown RBP15.85■□□□□ 0.13
PVT1-203ENST00000513868 SASH1O94885 1247 aa15.84■□□□□ 0.13
PVT1-203ENST00000513868 SDSP20132 328 aa15.84■□□□□ 0.13
PVT1-203ENST00000513868 RTL5Q5HYW3 569 aaPredicted RBP15.84■□□□□ 0.13
PVT1-203ENST00000513868 KLHDC4Q8TBB5 520 aa15.84■□□□□ 0.13
PVT1-203ENST00000513868 IPO9Q96P70 1041 aaKnown RBP15.84■□□□□ 0.13
PVT1-203ENST00000513868 COPRSQ9NQ92 184 aa15.84■□□□□ 0.13
PVT1-203ENST00000513868 TBC1D2BQ9UPU7 963 aa15.84■□□□□ 0.13
PVT1-203ENST00000513868 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.84■□□□□ 0.13
PVT1-203ENST00000513868 PTPN12Q05209 780 aaKnown RBP15.83■□□□□ 0.13
PVT1-203ENST00000513868 TSHZ3Q63HK5 1081 aa15.83■□□□□ 0.13
PVT1-203ENST00000513868 TBC1D9Q6ZT07 1266 aa15.83■□□□□ 0.13
PVT1-203ENST00000513868 NUTM1Q86Y26 1132 aa15.83■□□□□ 0.13
PVT1-203ENST00000513868 ERC1Q8IUD2 1116 aa15.83■□□□□ 0.13
PVT1-203ENST00000513868 LINC00116Q8NCU8 138 aa15.83■□□□□ 0.13
PVT1-203ENST00000513868 ARXQ96QS3 562 aa15.83■□□□□ 0.13
PVT1-203ENST00000513868 PCCAP05165 728 aaPredicted RBP15.83■□□□□ 0.12
PVT1-203ENST00000513868 HSP90AB3PQ58FF7 597 aa15.83■□□□□ 0.12
PVT1-203ENST00000513868 LMBR1LQ6UX01 489 aa15.83■□□□□ 0.12
PVT1-203ENST00000513868 NLRP10Q86W26 655 aa15.83■□□□□ 0.12
PVT1-203ENST00000513868 AOX1Q06278 1338 aa15.82■□□□□ 0.12
PVT1-203ENST00000513868 CDC45O75419 566 aa15.82■□□□□ 0.12
PVT1-203ENST00000513868 KCNQ4P56696 695 aa15.82■□□□□ 0.12
PVT1-203ENST00000513868 OS9Q13438 667 aaPredicted RBP15.82■□□□□ 0.12
PVT1-203ENST00000513868 TBC1D32Q96NH3 1257 aa15.82■□□□□ 0.12
PVT1-203ENST00000513868 GPTP24298 496 aa15.81■□□□□ 0.12
PVT1-203ENST00000513868 G3BP1Q13283 466 aaKnown RBP eCLIP15.81■□□□□ 0.12
PVT1-203ENST00000513868 ZNF34Q8IZ26 560 aa15.81■□□□□ 0.12
PVT1-203ENST00000513868 ZBTB38Q8NAP3 1195 aaPredicted RBP15.81■□□□□ 0.12
PVT1-203ENST00000513868 UBN2Q6ZU65 1347 aa15.81■□□□□ 0.12
PVT1-203ENST00000513868 USP42Q9H9J4 1324 aaKnown RBP15.81■□□□□ 0.12
PVT1-203ENST00000513868 DDX60Q8IY21 1712 aaKnown RBP15.8■□□□□ 0.12
PVT1-203ENST00000513868 EP400Q96L91 3159 aa15.8■□□□□ 0.12
PVT1-203ENST00000513868 CAMTA2O94983 1202 aa15.8■□□□□ 0.12
PVT1-203ENST00000513868 PI4K2BQ8TCG2 481 aa15.8■□□□□ 0.12
PVT1-203ENST00000513868 FAM89AQ96GI7 184 aa15.8■□□□□ 0.12
PVT1-203ENST00000513868 PLA2G12BQ9BX93 195 aa15.8■□□□□ 0.12
PVT1-203ENST00000513868 SIL1Q9H173 461 aa15.8■□□□□ 0.12
PVT1-203ENST00000513868 CASZ1Q86V15 1759 aa15.8■□□□□ 0.12
PVT1-203ENST00000513868 SCN7AQ01118 1682 aa15.79■□□□□ 0.12
PVT1-203ENST00000513868 MFAP1P55081 439 aaKnown RBP15.79■□□□□ 0.12
PVT1-203ENST00000513868 SYNE4Q8N205 404 aa15.79■□□□□ 0.12
PVT1-203ENST00000513868 CDHR2Q9BYE9 1310 aa15.79■□□□□ 0.12
PVT1-203ENST00000513868 CNTNAP4Q9C0A0 1308 aa15.79■□□□□ 0.12
PVT1-203ENST00000513868 LAMB2P55268 1798 aa15.79■□□□□ 0.12
PVT1-203ENST00000513868 CLASRPQ8N2M8 674 aaKnown RBP15.79■□□□□ 0.12
PVT1-203ENST00000513868 UPF2Q9HAU5 1272 aaKnown RBP15.79■□□□□ 0.12
PVT1-203ENST00000513868 EAF2Q96CJ1 260 aaPredicted RBP15.78■□□□□ 0.12
PVT1-203ENST00000513868 C4BP0C0L5 1744 aa15.78■□□□□ 0.12
PVT1-203ENST00000513868 CSF1RP07333 972 aa15.77■□□□□ 0.12
PVT1-203ENST00000513868 RC3H1Q5TC82 1133 aaKnown RBP15.77■□□□□ 0.12
PVT1-203ENST00000513868 C4AP0C0L4 1744 aa15.77■□□□□ 0.12
PVT1-203ENST00000513868 ATG9AQ7Z3C6 839 aa15.76■□□□□ 0.11
PVT1-203ENST00000513868 AACSQ86V21 672 aa15.76■□□□□ 0.11
PVT1-203ENST00000513868 C22orf23Q9BZE7 217 aa15.76■□□□□ 0.11
PVT1-203ENST00000513868 BCL11BQ9C0K0 894 aaPredicted RBP15.76■□□□□ 0.11
PVT1-203ENST00000513868 CHMP3Q9Y3E7 222 aa15.76■□□□□ 0.11
PVT1-203ENST00000513868 TTC41PQ6P2S7 1318 aa15.76■□□□□ 0.11
PVT1-203ENST00000513868 TFCP2Q12800 502 aa15.75■□□□□ 0.11
PVT1-203ENST00000513868 SUSD4Q5VX71 490 aa15.75■□□□□ 0.11
PVT1-203ENST00000513868 DDRGK1Q96HY6 314 aa15.75■□□□□ 0.11
PVT1-203ENST00000513868 TRMT112Q9UI30 125 aaKnown RBP15.75■□□□□ 0.11
PVT1-203ENST00000513868 CCNL1Q9UK58 526 aaPredicted RBP15.75■□□□□ 0.11
PVT1-203ENST00000513868 UBR3Q6ZT12 1888 aa15.75■□□□□ 0.11
PVT1-203ENST00000513868 IFIT2P09913 472 aaKnown RBP15.74■□□□□ 0.11
PVT1-203ENST00000513868 RBM25P49756 843 aaKnown RBP15.74■□□□□ 0.11
PVT1-203ENST00000513868 KRT27Q7Z3Y8 459 aa15.74■□□□□ 0.11
PVT1-203ENST00000513868 ZNF594Q96JF6 807 aaPredicted RBP15.74■□□□□ 0.11
PVT1-203ENST00000513868 CCDC8Q9H0W5 538 aaPredicted RBP15.74■□□□□ 0.11
PVT1-203ENST00000513868 ECHDC1Q9NTX5 307 aa15.74■□□□□ 0.11
PVT1-203ENST00000513868 TLR7Q9NYK1 1049 aaKnown RBP15.74■□□□□ 0.11
PVT1-203ENST00000513868 IRS4O14654 1257 aaPredicted RBP15.73■□□□□ 0.11
PVT1-203ENST00000513868 RPS6KA4O75676 772 aa15.73■□□□□ 0.11
PVT1-203ENST00000513868 ZNF772Q68DY9 489 aaPredicted RBP15.73■□□□□ 0.11
PVT1-203ENST00000513868 FAM196AQ6ZSG2 479 aa15.73■□□□□ 0.11
PVT1-203ENST00000513868 SMIM5Q71RC9 77 aa15.73■□□□□ 0.11
PVT1-203ENST00000513868 TTLL11Q8NHH1 800 aa15.73■□□□□ 0.11
PVT1-203ENST00000513868 COL24A1Q17RW2 1714 aa15.73■□□□□ 0.11
PVT1-203ENST00000513868 TRIM6-TRIM34B2RNG4 842 aa15.73■□□□□ 0.11
PVT1-203ENST00000513868 EYA2O00167 538 aa15.73■□□□□ 0.11
PVT1-203ENST00000513868 GLRX3O76003 335 aaKnown RBP15.73■□□□□ 0.11
PVT1-203ENST00000513868 CIAO1O76071 339 aa15.73■□□□□ 0.11
PVT1-203ENST00000513868 RBM6P78332 1123 aaKnown RBP15.73■□□□□ 0.11
PVT1-203ENST00000513868 LRRC24Q50LG9 513 aa15.73■□□□□ 0.11
PVT1-203ENST00000513868 TNNI3KQ59H18 835 aa15.73■□□□□ 0.11
PVT1-203ENST00000513868 CLEC4GQ6UXB4 293 aa15.73■□□□□ 0.11
PVT1-203ENST00000513868 FPGT-TNNI3KV9GXZ4 949 aa15.73■□□□□ 0.11
PVT1-203ENST00000513868 SPEF2Q9C093 1822 aa15.73■□□□□ 0.11
PVT1-203ENST00000513868 CTSWP56202 376 aa15.72■□□□□ 0.11
PVT1-203ENST00000513868 PARP10Q53GL7 1025 aa15.72■□□□□ 0.11
PVT1-203ENST00000513868 AMIGO3Q86WK7 504 aa15.72■□□□□ 0.11
PVT1-203ENST00000513868 RILPL2Q969X0 211 aa15.72■□□□□ 0.11
PVT1-203ENST00000513868 PUS3Q9BZE2 481 aaKnown RBP15.72■□□□□ 0.11
PVT1-203ENST00000513868 ERC2O15083 957 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms