RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 ATP5J2-PTCD1G3V325 749 aa31.11■■■□□ 2.57
SRPK1-210ENST00000508473 GOLGA2Q08379 1002 aa31.11■■■□□ 2.57
SRPK1-210ENST00000508473 CHMP4AQ9BY43 222 aa31.11■■■□□ 2.57
SRPK1-210ENST00000508473 NFKBIEO00221 500 aa31.1■■■□□ 2.57
SRPK1-210ENST00000508473 C3orf67Q6ZVT6 689 aa31.1■■■□□ 2.57
SRPK1-210ENST00000508473 RIC3Q7Z5B4 369 aa31.1■■■□□ 2.57
SRPK1-210ENST00000508473 GPBP1L1Q9HC44 474 aaPredicted RBP31.1■■■□□ 2.57
SRPK1-210ENST00000508473 SLX4Q8IY92 1834 aa31.1■■■□□ 2.57
SRPK1-210ENST00000508473 PRELPP51888 382 aa31.09■■■□□ 2.57
SRPK1-210ENST00000508473 CRY2Q49AN0 593 aa31.09■■■□□ 2.57
SRPK1-210ENST00000508473 TRMT112Q9UI30 125 aaKnown RBP31.09■■■□□ 2.57
SRPK1-210ENST00000508473 SYNE4Q8N205 404 aa31.08■■■□□ 2.57
SRPK1-210ENST00000508473 CCER2I3L3R5 266 aa31.07■■■□□ 2.56
SRPK1-210ENST00000508473 EXOSC9Q06265 439 aaKnown RBP31.07■■■□□ 2.56
SRPK1-210ENST00000508473 RPGRQ92834 1020 aaKnown RBP31.07■■■□□ 2.56
SRPK1-210ENST00000508473 ISCA1Q9BUE6 129 aa31.07■■■□□ 2.56
SRPK1-210ENST00000508473 STK31Q9BXU1 1019 aa31.07■■■□□ 2.56
SRPK1-210ENST00000508473 ALDH1B1P30837 517 aa31.06■■■□□ 2.56
SRPK1-210ENST00000508473 ANKRD36CQ5JPF3 1778 aa31.06■■■□□ 2.56
SRPK1-210ENST00000508473 RIC1Q4ADV7 1423 aa31.06■■■□□ 2.56
SRPK1-210ENST00000508473 HCLS1P14317 486 aaPredicted RBP31.05■■■□□ 2.56
SRPK1-210ENST00000508473 LMNB1P20700 586 aa31.05■■■□□ 2.56
SRPK1-210ENST00000508473 SLC10A5Q5PT55 438 aa31.05■■■□□ 2.56
SRPK1-210ENST00000508473 OLFM4Q6UX06 510 aa31.05■■■□□ 2.56
SRPK1-210ENST00000508473 C7orf43Q8WVR3 580 aa31.05■■■□□ 2.56
SRPK1-210ENST00000508473 NLRP3Q96P20 1036 aa31.05■■■□□ 2.56
SRPK1-210ENST00000508473 CACNA1SQ13698 1873 aa31.05■■■□□ 2.56
SRPK1-210ENST00000508473 RNF123Q5XPI4 1314 aa31.03■■■□□ 2.56
SRPK1-210ENST00000508473 SH3TC1Q8TE82 1336 aa31.03■■■□□ 2.56
SRPK1-210ENST00000508473 SOGA3Q5TF21 947 aa31.03■■■□□ 2.56
SRPK1-210ENST00000508473 MYD88Q99836 296 aa31.03■■■□□ 2.56
SRPK1-210ENST00000508473 MYH16Q9H6N6 1097 aa31.03■■■□□ 2.56
SRPK1-210ENST00000508473 DDX58O95786 925 aaKnown RBP31.02■■■□□ 2.56
SRPK1-210ENST00000508473 RBM17Q96I25 401 aaKnown RBP31.02■■■□□ 2.56
SRPK1-210ENST00000508473 TAOK3Q9H2K8 898 aa31.02■■■□□ 2.56
SRPK1-210ENST00000508473 ZNF521Q96K83 1311 aa31.01■■■□□ 2.56
SRPK1-210ENST00000508473 VAMP4O75379 141 aa31.01■■■□□ 2.55
SRPK1-210ENST00000508473 SLC4A2P04920 1241 aa31.01■■■□□ 2.55
SRPK1-210ENST00000508473 HOXA10P31260 410 aaPredicted RBP31.01■■■□□ 2.55
SRPK1-210ENST00000508473 CCDC93Q567U6 631 aa31.01■■■□□ 2.55
SRPK1-210ENST00000508473 G2E3Q7L622 706 aa31.01■■■□□ 2.55
SRPK1-210ENST00000508473 SBF1O95248 1867 aa31■■■□□ 2.55
SRPK1-210ENST00000508473 RTL5Q5HYW3 569 aaPredicted RBP31■■■□□ 2.55
SRPK1-210ENST00000508473 DIEXFQ68CQ4 756 aaKnown RBP31■■■□□ 2.55
SRPK1-210ENST00000508473 FAM89AQ96GI7 184 aa31■■■□□ 2.55
SRPK1-210ENST00000508473 ARFGEF2Q9Y6D5 1785 aa31■■■□□ 2.55
SRPK1-210ENST00000508473 MAP3K2Q9Y2U5 619 aa30.99■■■□□ 2.55
SRPK1-210ENST00000508473 TRIM28Q13263 835 aaKnown RBP30.98■■■□□ 2.55
SRPK1-210ENST00000508473 CRAMP1Q96RY5 1269 aa30.98■■■□□ 2.55
SRPK1-210ENST00000508473 PI4KAP2A4QPH2 592 aa30.97■■■□□ 2.55
SRPK1-210ENST00000508473 KSR2Q6VAB6 950 aa30.97■■■□□ 2.55
SRPK1-210ENST00000508473 PI4KAP1Q8N8J0 262 aa30.97■■■□□ 2.55
SRPK1-210ENST00000508473 METTL22Q9BUU2 404 aaPredicted RBP30.97■■■□□ 2.55
SRPK1-210ENST00000508473 LTBP3Q9NS15 1303 aa30.96■■■□□ 2.55
SRPK1-210ENST00000508473 FER1L6Q2WGJ9 1857 aa30.95■■■□□ 2.55
SRPK1-210ENST00000508473 SLC51AQ86UW1 340 aa30.95■■■□□ 2.55
SRPK1-210ENST00000508473 NMRK2Q9NPI5 230 aa30.94■■■□□ 2.54
SRPK1-210ENST00000508473 PPEF1O14829 653 aaPredicted RBP30.93■■■□□ 2.54
SRPK1-210ENST00000508473 C1QTNF8P60827 252 aa30.93■■■□□ 2.54
SRPK1-210ENST00000508473 RTKN2Q8IZC4 609 aa30.93■■■□□ 2.54
SRPK1-210ENST00000508473 MIER1Q8N108 512 aa30.93■■■□□ 2.54
SRPK1-210ENST00000508473 ABCC4O15439 1325 aa30.93■■■□□ 2.54
SRPK1-210ENST00000508473 FKBP4Q02790 459 aaKnown RBP eCLIP30.92■■■□□ 2.54
SRPK1-210ENST00000508473 FLIIQ13045 1269 aa30.92■■■□□ 2.54
SRPK1-210ENST00000508473 CCDC191Q8NCU4 936 aa30.92■■■□□ 2.54
SRPK1-210ENST00000508473 JARID2Q92833 1246 aaPredicted RBP30.92■■■□□ 2.54
SRPK1-210ENST00000508473 ZNF277Q9NRM2 450 aaPredicted RBP30.92■■■□□ 2.54
SRPK1-210ENST00000508473 IRS4O14654 1257 aaPredicted RBP30.91■■■□□ 2.54
SRPK1-210ENST00000508473 KIF3CO14782 793 aa30.91■■■□□ 2.54
SRPK1-210ENST00000508473 ZBTB38Q8NAP3 1195 aaPredicted RBP30.91■■■□□ 2.54
SRPK1-210ENST00000508473 CWC25Q9NXE8 425 aaPredicted RBP30.91■■■□□ 2.54
SRPK1-210ENST00000508473 ZC3H4Q9UPT8 1303 aaKnown RBP30.91■■■□□ 2.54
SRPK1-210ENST00000508473 DDX46Q7L014 1031 aaKnown RBP30.9■■■□□ 2.54
SRPK1-210ENST00000508473 CCDC88AQ3V6T2 1871 aa30.9■■■□□ 2.54
SRPK1-210ENST00000508473 KDM2BQ8NHM5 1336 aa30.9■■■□□ 2.54
SRPK1-210ENST00000508473 FKBP5Q13451 457 aaPredicted RBP30.89■■■□□ 2.54
SRPK1-210ENST00000508473 IGKV5-2P06315 115 aa30.88■■■□□ 2.53
SRPK1-210ENST00000508473 NEXNQ0ZGT2 675 aa30.88■■■□□ 2.53
SRPK1-210ENST00000508473 CC2D2BQ6DHV5 1058 aa30.88■■■□□ 2.53
SRPK1-210ENST00000508473 E9PSI1 815 aa30.87■■■□□ 2.53
SRPK1-210ENST00000508473 LAMB2P55268 1798 aa30.87■■■□□ 2.53
SRPK1-210ENST00000508473 PCCAP05165 728 aaPredicted RBP30.86■■■□□ 2.53
SRPK1-210ENST00000508473 CWF19L2Q2TBE0 894 aaKnown RBP30.86■■■□□ 2.53
SRPK1-210ENST00000508473 CDCA7LQ96GN5 454 aa30.86■■■□□ 2.53
SRPK1-210ENST00000508473 RRAGCQ9HB90 399 aa30.86■■■□□ 2.53
SRPK1-210ENST00000508473 DDX60Q8IY21 1712 aaKnown RBP30.85■■■□□ 2.53
SRPK1-210ENST00000508473 SNED1Q8TER0 1413 aa30.85■■■□□ 2.53
SRPK1-210ENST00000508473 GLTPD2A6NH11 291 aa30.85■■■□□ 2.53
SRPK1-210ENST00000508473 GRAPQ13588 217 aa30.85■■■□□ 2.53
SRPK1-210ENST00000508473 SF3B3Q15393 1217 aaKnown RBP30.85■■■□□ 2.53
SRPK1-210ENST00000508473 GRAPLQ8TC17 118 aaPredicted RBP30.85■■■□□ 2.53
SRPK1-210ENST00000508473 ATP6V0A2Q9Y487 856 aa30.85■■■□□ 2.53
SRPK1-210ENST00000508473 TIAM2Q8IVF5 1701 aa30.84■■■□□ 2.53
SRPK1-210ENST00000508473 BBOX1O75936 387 aa30.84■■■□□ 2.53
SRPK1-210ENST00000508473 SLFN5Q08AF3 891 aa30.84■■■□□ 2.53
SRPK1-210ENST00000508473 TMX4Q9H1E5 349 aaPredicted RBP30.84■■■□□ 2.53
SRPK1-210ENST00000508473 IARSP41252 1262 aaKnown RBP30.83■■■□□ 2.53
SRPK1-210ENST00000508473 DNAAF4Q8WXU2 420 aa30.83■■■□□ 2.53
SRPK1-210ENST00000508473 PSMD1Q99460 953 aa30.83■■■□□ 2.53
SRPK1-210ENST00000508473 NEURL1BA8MQ27 555 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms