RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CD2BP2O95400 341 aaKnown RBP20.95■□□□□ 0.94
TRAPPC11-204ENST00000505676 HSPA4P34932 840 aa20.95■□□□□ 0.94
TRAPPC11-204ENST00000505676 PIP4K2AP48426 406 aaPredicted RBP20.95■□□□□ 0.94
TRAPPC11-204ENST00000505676 GPR108Q9NPR9 543 aa20.95■□□□□ 0.94
TRAPPC11-204ENST00000505676 TJP1Q07157 1748 aa20.95■□□□□ 0.94
TRAPPC11-204ENST00000505676 ATP5J2-PTCD1G3V325 749 aa20.94■□□□□ 0.94
TRAPPC11-204ENST00000505676 TCIRG1Q13488 830 aa20.94■□□□□ 0.94
TRAPPC11-204ENST00000505676 RAB3GAP1Q15042 981 aa20.94■□□□□ 0.94
TRAPPC11-204ENST00000505676 EAF2Q96CJ1 260 aaPredicted RBP20.94■□□□□ 0.94
TRAPPC11-204ENST00000505676 GBP4Q96PP9 640 aa20.94■□□□□ 0.94
TRAPPC11-204ENST00000505676 SPRYD3Q8NCJ5 442 aa20.94■□□□□ 0.94
TRAPPC11-204ENST00000505676 MCM4P33991 863 aa20.93■□□□□ 0.94
TRAPPC11-204ENST00000505676 GSE1Q14687 1217 aa20.93■□□□□ 0.94
TRAPPC11-204ENST00000505676 SPATA31A1Q5TZJ5 1347 aa20.93■□□□□ 0.94
TRAPPC11-204ENST00000505676 NUCB2P80303 420 aa20.93■□□□□ 0.94
TRAPPC11-204ENST00000505676 FOXO4P98177 505 aa20.93■□□□□ 0.94
TRAPPC11-204ENST00000505676 SNRKQ9NRH2 765 aa20.92■□□□□ 0.94
TRAPPC11-204ENST00000505676 ASAP1Q9ULH1 1129 aa20.92■□□□□ 0.94
TRAPPC11-204ENST00000505676 CIAO1O76071 339 aa20.92■□□□□ 0.94
TRAPPC11-204ENST00000505676 PLA2G12BQ9BX93 195 aa20.92■□□□□ 0.94
TRAPPC11-204ENST00000505676 ATP5JP18859 108 aa20.91■□□□□ 0.94
TRAPPC11-204ENST00000505676 TNNI3KQ59H18 835 aa20.91■□□□□ 0.94
TRAPPC11-204ENST00000505676 LMBR1LQ6UX01 489 aa20.91■□□□□ 0.94
TRAPPC11-204ENST00000505676 DNAJC10Q8IXB1 793 aa20.91■□□□□ 0.94
TRAPPC11-204ENST00000505676 FPGT-TNNI3KV9GXZ4 949 aa20.91■□□□□ 0.94
TRAPPC11-204ENST00000505676 IL15P40933 162 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC11-204ENST00000505676 CLEC17AQ6ZS10 378 aa20.9■□□□□ 0.94
TRAPPC11-204ENST00000505676 BARGINQ6ZT62 677 aa20.9■□□□□ 0.94
TRAPPC11-204ENST00000505676 LSG1Q9H089 658 aaKnown RBP20.9■□□□□ 0.94
TRAPPC11-204ENST00000505676 SIL1Q9H173 461 aa20.9■□□□□ 0.94
TRAPPC11-204ENST00000505676 MAP3K15Q6ZN16 1313 aa20.9■□□□□ 0.94
TRAPPC11-204ENST00000505676 PCCAP05165 728 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC11-204ENST00000505676 ZBTB3Q9H5J0 574 aa20.9■□□□□ 0.94
TRAPPC11-204ENST00000505676 CICQ96RK0 1608 aaPredicted RBP20.89■□□□□ 0.94
TRAPPC11-204ENST00000505676 NEK4P51957 841 aa20.89■□□□□ 0.93
TRAPPC11-204ENST00000505676 SLIT2O94813 1529 aa20.88■□□□□ 0.93
TRAPPC11-204ENST00000505676 CDHR2Q9BYE9 1310 aa20.88■□□□□ 0.93
TRAPPC11-204ENST00000505676 MAP4K4O95819 1239 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC11-204ENST00000505676 DDB1Q16531 1140 aa20.88■□□□□ 0.93
TRAPPC11-204ENST00000505676 GIGYF2Q6Y7W6 1299 aaKnown RBP20.88■□□□□ 0.93
TRAPPC11-204ENST00000505676 INTS4Q96HW7 963 aaKnown RBP20.88■□□□□ 0.93
TRAPPC11-204ENST00000505676 SPATA31A5Q5VU36 1347 aa20.88■□□□□ 0.93
TRAPPC11-204ENST00000505676 SPATA31A7Q8IWB4 1347 aa20.88■□□□□ 0.93
TRAPPC11-204ENST00000505676 ERVV-1B6SEH8 477 aa20.88■□□□□ 0.93
TRAPPC11-204ENST00000505676 CYP19A1P11511 503 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC11-204ENST00000505676 CCDC8Q9H0W5 538 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC11-204ENST00000505676 IL6STP40189 918 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC11-204ENST00000505676 CWC27Q6UX04 472 aaKnown RBP20.87■□□□□ 0.93
TRAPPC11-204ENST00000505676 TFCP2Q12800 502 aa20.86■□□□□ 0.93
TRAPPC11-204ENST00000505676 ZBTB38Q8NAP3 1195 aaPredicted RBP20.86■□□□□ 0.93
TRAPPC11-204ENST00000505676 KCNB2Q92953 911 aa20.86■□□□□ 0.93
TRAPPC11-204ENST00000505676 DOT1LQ8TEK3 1739 aa20.86■□□□□ 0.93
TRAPPC11-204ENST00000505676 GOLGA6L22H0YM25 854 aa20.85■□□□□ 0.93
TRAPPC11-204ENST00000505676 EYA2O00167 538 aa20.85■□□□□ 0.93
TRAPPC11-204ENST00000505676 CUL4AQ13619 759 aa20.85■□□□□ 0.93
TRAPPC11-204ENST00000505676 KLHDC4Q8TBB5 520 aa20.85■□□□□ 0.93
TRAPPC11-204ENST00000505676 TNPO1Q92973 898 aaKnown RBP20.85■□□□□ 0.93
TRAPPC11-204ENST00000505676 TM6SF1Q9BZW5 370 aa20.85■□□□□ 0.93
TRAPPC11-204ENST00000505676 SKOR2Q2VWA4 1001 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC11-204ENST00000505676 FSD1Q9BTV5 496 aa20.84■□□□□ 0.93
TRAPPC11-204ENST00000505676 DBNLQ9UJU6 430 aaKnown RBP20.84■□□□□ 0.93
TRAPPC11-204ENST00000505676 PALD1Q9ULE6 856 aa20.84■□□□□ 0.93
TRAPPC11-204ENST00000505676 CHMP3Q9Y3E7 222 aa20.84■□□□□ 0.93
TRAPPC11-204ENST00000505676 ANKRD36CQ5JPF3 1778 aa20.84■□□□□ 0.93
TRAPPC11-204ENST00000505676 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.84■□□□□ 0.93
TRAPPC11-204ENST00000505676 CCDC57Q2TAC2 916 aa20.83■□□□□ 0.93
TRAPPC11-204ENST00000505676 TLR7Q9NYK1 1049 aaKnown RBP20.83■□□□□ 0.93
TRAPPC11-204ENST00000505676 CCDC171Q6TFL3 1326 aa20.83■□□□□ 0.92
TRAPPC11-204ENST00000505676 ADAMTS2O95450 1211 aa20.82■□□□□ 0.92
TRAPPC11-204ENST00000505676 AK7Q96M32 723 aa20.82■□□□□ 0.92
TRAPPC11-204ENST00000505676 HAUS7Q99871 368 aa20.82■□□□□ 0.92
TRAPPC11-204ENST00000505676 BOLA2Q9H3K6 86 aa20.82■□□□□ 0.92
TRAPPC11-204ENST00000505676 AKAP2Q9Y2D5 859 aa20.82■□□□□ 0.92
TRAPPC11-204ENST00000505676 ATG9AQ7Z3C6 839 aa20.82■□□□□ 0.92
TRAPPC11-204ENST00000505676 JARID2Q92833 1246 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC11-204ENST00000505676 SMARCC1Q92922 1105 aaPredicted RBP20.82■□□□□ 0.92
TRAPPC11-204ENST00000505676 TMX3Q96JJ7 454 aa20.82■□□□□ 0.92
TRAPPC11-204ENST00000505676 IL25Q9H293 177 aa20.82■□□□□ 0.92
TRAPPC11-204ENST00000505676 SPEF2Q9C093 1822 aa20.82■□□□□ 0.92
TRAPPC11-204ENST00000505676 CSF1RP07333 972 aa20.81■□□□□ 0.92
TRAPPC11-204ENST00000505676 ZKSCAN1P17029 563 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC11-204ENST00000505676 PRIM1P49642 420 aaKnown RBP20.81■□□□□ 0.92
TRAPPC11-204ENST00000505676 RNF20Q5VTR2 975 aa20.81■□□□□ 0.92
TRAPPC11-204ENST00000505676 SNX14Q9Y5W7 946 aa20.81■□□□□ 0.92
TRAPPC11-204ENST00000505676 JCADQ9P266 1359 aa20.81■□□□□ 0.92
TRAPPC11-204ENST00000505676 MED23Q9ULK4 1368 aa20.81■□□□□ 0.92
TRAPPC11-204ENST00000505676 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC11-204ENST00000505676 ZNF609O15014 1411 aa20.81■□□□□ 0.92
TRAPPC11-204ENST00000505676 RREB1Q92766 1687 aa20.8■□□□□ 0.92
TRAPPC11-204ENST00000505676 CYP2E1P05181 493 aaPredicted RBP20.8■□□□□ 0.92
TRAPPC11-204ENST00000505676 HMG20BQ9P0W2 317 aa20.8■□□□□ 0.92
TRAPPC11-204ENST00000505676 ZNF831Q5JPB2 1677 aa20.8■□□□□ 0.92
TRAPPC11-204ENST00000505676 MAP4K1Q92918 833 aa20.8■□□□□ 0.92
TRAPPC11-204ENST00000505676 SYTL4Q96C24 671 aaPredicted RBP20.8■□□□□ 0.92
TRAPPC11-204ENST00000505676 ABCC12Q96J65 1359 aa20.79■□□□□ 0.92
TRAPPC11-204ENST00000505676 HSP90B1P14625 803 aaKnown RBP20.79■□□□□ 0.92
TRAPPC11-204ENST00000505676 NMIQ13287 307 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC11-204ENST00000505676 LRRFIP1Q32MZ4 808 aaKnown RBP20.79■□□□□ 0.92
TRAPPC11-204ENST00000505676 NLRP10Q86W26 655 aa20.79■□□□□ 0.92
TRAPPC11-204ENST00000505676 SLC4A9Q96Q91 983 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms