RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 OLFM4Q6UX06 510 aa18.41■□□□□ 0.54
HOXC9-202ENST00000504557 ANKRD13DQ6ZTN6 518 aa18.41■□□□□ 0.54
HOXC9-202ENST00000504557 TAF1P21675 1872 aa18.41■□□□□ 0.54
HOXC9-202ENST00000504557 ATP5J2-PTCD1G3V325 749 aa18.4■□□□□ 0.54
HOXC9-202ENST00000504557 LMNB1P20700 586 aa18.4■□□□□ 0.54
HOXC9-202ENST00000504557 PRELPP51888 382 aa18.4■□□□□ 0.54
HOXC9-202ENST00000504557 C1QTNF8P60827 252 aa18.4■□□□□ 0.54
HOXC9-202ENST00000504557 TCIRG1Q13488 830 aa18.4■□□□□ 0.54
HOXC9-202ENST00000504557 PLBD2Q8NHP8 589 aa18.4■□□□□ 0.54
HOXC9-202ENST00000504557 TRMT112Q9UI30 125 aaKnown RBP18.4■□□□□ 0.54
HOXC9-202ENST00000504557 IBTKQ9P2D0 1353 aaPredicted RBP18.4■□□□□ 0.54
HOXC9-202ENST00000504557 GOLGA2Q08379 1002 aa18.39■□□□□ 0.53
HOXC9-202ENST00000504557 RTL5Q5HYW3 569 aaPredicted RBP18.39■□□□□ 0.53
HOXC9-202ENST00000504557 C3orf67Q6ZVT6 689 aa18.39■□□□□ 0.53
HOXC9-202ENST00000504557 RIC3Q7Z5B4 369 aa18.39■□□□□ 0.53
HOXC9-202ENST00000504557 NLRP10Q86W26 655 aa18.39■□□□□ 0.53
HOXC9-202ENST00000504557 SYNE4Q8N205 404 aa18.39■□□□□ 0.53
HOXC9-202ENST00000504557 HCLS1P14317 486 aaPredicted RBP18.38■□□□□ 0.53
HOXC9-202ENST00000504557 CCDC30Q5VVM6 783 aa18.38■□□□□ 0.53
HOXC9-202ENST00000504557 TAOK3Q9H2K8 898 aa18.38■□□□□ 0.53
HOXC9-202ENST00000504557 NMRK2Q9NPI5 230 aa18.38■□□□□ 0.53
HOXC9-202ENST00000504557 KLRG2A4D1S0 409 aaPredicted RBP18.37■□□□□ 0.53
HOXC9-202ENST00000504557 ALDH1B1P30837 517 aa18.37■□□□□ 0.53
HOXC9-202ENST00000504557 TWISTNBQ3B726 338 aaPredicted RBP18.37■□□□□ 0.53
HOXC9-202ENST00000504557 NLRP3Q96P20 1036 aa18.37■□□□□ 0.53
HOXC9-202ENST00000504557 FANCIQ9NVI1 1328 aa18.37■□□□□ 0.53
HOXC9-202ENST00000504557 DDX60Q8IY21 1712 aaKnown RBP18.37■□□□□ 0.53
HOXC9-202ENST00000504557 CCDC93Q567U6 631 aa18.36■□□□□ 0.53
HOXC9-202ENST00000504557 SOGA3Q5TF21 947 aa18.36■□□□□ 0.53
HOXC9-202ENST00000504557 RBM17Q96I25 401 aaKnown RBP18.36■□□□□ 0.53
HOXC9-202ENST00000504557 STK31Q9BXU1 1019 aa18.36■□□□□ 0.53
HOXC9-202ENST00000504557 IL16Q14005 1332 aa18.35■□□□□ 0.53
HOXC9-202ENST00000504557 CRY2Q49AN0 593 aa18.35■□□□□ 0.53
HOXC9-202ENST00000504557 SLC51AQ86UW1 340 aa18.35■□□□□ 0.53
HOXC9-202ENST00000504557 MYD88Q99836 296 aa18.35■□□□□ 0.53
HOXC9-202ENST00000504557 KDM2BQ8NHM5 1336 aa18.34■□□□□ 0.53
HOXC9-202ENST00000504557 SH3TC1Q8TE82 1336 aa18.34■□□□□ 0.53
HOXC9-202ENST00000504557 CACNA1FO60840 1977 aa18.34■□□□□ 0.53
HOXC9-202ENST00000504557 KIF3CO14782 793 aa18.34■□□□□ 0.53
HOXC9-202ENST00000504557 WDR63Q8IWG1 891 aa18.34■□□□□ 0.53
HOXC9-202ENST00000504557 FAM89AQ96GI7 184 aa18.34■□□□□ 0.53
HOXC9-202ENST00000504557 RIC1Q4ADV7 1423 aa18.33■□□□□ 0.53
HOXC9-202ENST00000504557 EXOSC9Q06265 439 aaKnown RBP18.33■□□□□ 0.52
HOXC9-202ENST00000504557 C7orf43Q8WVR3 580 aa18.33■□□□□ 0.52
HOXC9-202ENST00000504557 RRAGCQ9HB90 399 aa18.33■□□□□ 0.52
HOXC9-202ENST00000504557 SPINK5Q9NQ38 1064 aaPredicted RBP18.33■□□□□ 0.52
HOXC9-202ENST00000504557 ZNF277Q9NRM2 450 aaPredicted RBP18.33■□□□□ 0.52
HOXC9-202ENST00000504557 PPEF1O14829 653 aaPredicted RBP18.32■□□□□ 0.52
HOXC9-202ENST00000504557 DDX58O95786 925 aaKnown RBP18.32■□□□□ 0.52
HOXC9-202ENST00000504557 ISCA1Q9BUE6 129 aa18.32■□□□□ 0.52
HOXC9-202ENST00000504557 CHMP4AQ9BY43 222 aa18.32■□□□□ 0.52
HOXC9-202ENST00000504557 SLC4A2P04920 1241 aa18.31■□□□□ 0.52
HOXC9-202ENST00000504557 SLC10A5Q5PT55 438 aa18.31■□□□□ 0.52
HOXC9-202ENST00000504557 G2E3Q7L622 706 aa18.31■□□□□ 0.52
HOXC9-202ENST00000504557 C16orf71Q8IYS4 520 aaPredicted RBP18.31■□□□□ 0.52
HOXC9-202ENST00000504557 JARID2Q92833 1246 aaPredicted RBP18.31■□□□□ 0.52
HOXC9-202ENST00000504557 MAP3K2Q9Y2U5 619 aa18.31■□□□□ 0.52
HOXC9-202ENST00000504557 ABCC4O15439 1325 aa18.3■□□□□ 0.52
HOXC9-202ENST00000504557 RNF123Q5XPI4 1314 aa18.3■□□□□ 0.52
HOXC9-202ENST00000504557 LTBP3Q9NS15 1303 aa18.3■□□□□ 0.52
HOXC9-202ENST00000504557 HOXA10P31260 410 aaPredicted RBP18.3■□□□□ 0.52
HOXC9-202ENST00000504557 FKBP4Q02790 459 aaKnown RBP eCLIP18.3■□□□□ 0.52
HOXC9-202ENST00000504557 NCBP3Q53F19 620 aaKnown RBP18.3■□□□□ 0.52
HOXC9-202ENST00000504557 RTKN2Q8IZC4 609 aa18.3■□□□□ 0.52
HOXC9-202ENST00000504557 CRAMP1Q96RY5 1269 aa18.3■□□□□ 0.52
HOXC9-202ENST00000504557 PI4KAP2A4QPH2 592 aa18.29■□□□□ 0.52
HOXC9-202ENST00000504557 DDX46Q7L014 1031 aaKnown RBP18.29■□□□□ 0.52
HOXC9-202ENST00000504557 PI4KAP1Q8N8J0 262 aa18.29■□□□□ 0.52
HOXC9-202ENST00000504557 MYH16Q9H6N6 1097 aa18.29■□□□□ 0.52
HOXC9-202ENST00000504557 GLTPD2A6NH11 291 aa18.28■□□□□ 0.52
HOXC9-202ENST00000504557 TMX4Q9H1E5 349 aaPredicted RBP18.28■□□□□ 0.52
HOXC9-202ENST00000504557 ZC3H4Q9UPT8 1303 aaKnown RBP18.27■□□□□ 0.52
HOXC9-202ENST00000504557 IRS4O14654 1257 aaPredicted RBP18.27■□□□□ 0.52
HOXC9-202ENST00000504557 DPY19L2Q6NUT2 758 aa18.27■□□□□ 0.52
HOXC9-202ENST00000504557 KSR2Q6VAB6 950 aa18.27■□□□□ 0.52
HOXC9-202ENST00000504557 METTL22Q9BUU2 404 aaPredicted RBP18.27■□□□□ 0.52
HOXC9-202ENST00000504557 MYH3P11055 1940 aa18.27■□□□□ 0.51
HOXC9-202ENST00000504557 SPEF2Q9C093 1822 aa18.26■□□□□ 0.51
HOXC9-202ENST00000504557 VAMP4O75379 141 aa18.26■□□□□ 0.51
HOXC9-202ENST00000504557 IARSP41252 1262 aaKnown RBP18.26■□□□□ 0.51
HOXC9-202ENST00000504557 FKBP5Q13451 457 aaPredicted RBP18.26■□□□□ 0.51
HOXC9-202ENST00000504557 CCDC85AQ96PX6 553 aaPredicted RBP18.26■□□□□ 0.51
HOXC9-202ENST00000504557 CWC25Q9NXE8 425 aaPredicted RBP18.26■□□□□ 0.51
HOXC9-202ENST00000504557 TOMM70O94826 608 aa18.25■□□□□ 0.51
HOXC9-202ENST00000504557 DDNO94850 711 aaPredicted RBP18.25■□□□□ 0.51
HOXC9-202ENST00000504557 NEXNQ0ZGT2 675 aa18.25■□□□□ 0.51
HOXC9-202ENST00000504557 FLIIQ13045 1269 aa18.25■□□□□ 0.51
HOXC9-202ENST00000504557 CWF19L2Q2TBE0 894 aaKnown RBP18.25■□□□□ 0.51
HOXC9-202ENST00000504557 TRIM28Q13263 835 aaKnown RBP18.24■□□□□ 0.51
HOXC9-202ENST00000504557 GRAPQ13588 217 aa18.24■□□□□ 0.51
HOXC9-202ENST00000504557 CC2D2BQ6DHV5 1058 aa18.24■□□□□ 0.51
HOXC9-202ENST00000504557 ZBTB38Q8NAP3 1195 aaPredicted RBP18.24■□□□□ 0.51
HOXC9-202ENST00000504557 CCDC191Q8NCU4 936 aa18.24■□□□□ 0.51
HOXC9-202ENST00000504557 GRAPLQ8TC17 118 aaPredicted RBP18.24■□□□□ 0.51
HOXC9-202ENST00000504557 ATP6V0A2Q9Y487 856 aa18.24■□□□□ 0.51
HOXC9-202ENST00000504557 COL4A1P02462 1669 aa18.24■□□□□ 0.51
HOXC9-202ENST00000504557 ZNF541Q9H0D2 1346 aa18.23■□□□□ 0.51
HOXC9-202ENST00000504557 WDR90Q96KV7 1748 aa18.23■□□□□ 0.51
HOXC9-202ENST00000504557 PSMD1Q99460 953 aa18.23■□□□□ 0.51
HOXC9-202ENST00000504557 CCER2I3L3R5 266 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms