RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 LMOD1P29536 600 aaPredicted RBP20.99■□□□□ 0.95
HDAC6-236ENST00000498808 CRY2Q49AN0 593 aa20.99■□□□□ 0.95
HDAC6-236ENST00000498808 CST9Q5W186 159 aa20.99■□□□□ 0.95
HDAC6-236ENST00000498808 BEGAINQ9BUH8 593 aa20.99■□□□□ 0.95
HDAC6-236ENST00000498808 TSKSQ9UJT2 592 aa20.99■□□□□ 0.95
HDAC6-236ENST00000498808 SLC51AQ86UW1 340 aa20.98■□□□□ 0.95
HDAC6-236ENST00000498808 PRKAR2BP31323 418 aa20.97■□□□□ 0.95
HDAC6-236ENST00000498808 TLL2Q9Y6L7 1015 aa20.97■□□□□ 0.95
HDAC6-236ENST00000498808 AOC2O75106 756 aa20.96■□□□□ 0.95
HDAC6-236ENST00000498808 GTF2E1P29083 439 aaPredicted RBP20.96■□□□□ 0.95
HDAC6-236ENST00000498808 CC2D2BQ6DHV5 1058 aa20.96■□□□□ 0.95
HDAC6-236ENST00000498808 NUTM1Q86Y26 1132 aa20.96■□□□□ 0.95
HDAC6-236ENST00000498808 RSPH6AQ9H0K4 717 aa20.96■□□□□ 0.95
HDAC6-236ENST00000498808 USP50Q70EL3 339 aaPredicted RBP20.95■□□□□ 0.94
HDAC6-236ENST00000498808 MCM10Q7L590 875 aa20.94■□□□□ 0.94
HDAC6-236ENST00000498808 LARGE2Q8N3Y3 721 aa20.94■□□□□ 0.94
HDAC6-236ENST00000498808 PCGF6Q9BYE7 350 aa20.94■□□□□ 0.94
HDAC6-236ENST00000498808 MAP2K2P36507 400 aa20.93■□□□□ 0.94
HDAC6-236ENST00000498808 NPC1L1Q9UHC9 1359 aa20.93■□□□□ 0.94
HDAC6-236ENST00000498808 RIC1Q4ADV7 1423 aa20.93■□□□□ 0.94
HDAC6-236ENST00000498808 LAMB4A4D0S4 1761 aa20.92■□□□□ 0.94
HDAC6-236ENST00000498808 NUP98P52948 1817 aa20.92■□□□□ 0.94
HDAC6-236ENST00000498808 CASP8AP2Q9UKL3 1982 aa20.92■□□□□ 0.94
HDAC6-236ENST00000498808 HOXA10P31260 410 aaPredicted RBP20.92■□□□□ 0.94
HDAC6-236ENST00000498808 CNGB1Q14028 1251 aaPredicted RBP20.92■□□□□ 0.94
HDAC6-236ENST00000498808 MCOLN1Q9GZU1 580 aa20.92■□□□□ 0.94
HDAC6-236ENST00000498808 SAPCD2Q86UD0 394 aa20.91■□□□□ 0.94
HDAC6-236ENST00000498808 NYXQ9GZU5 481 aa20.91■□□□□ 0.94
HDAC6-236ENST00000498808 PCDH10Q9P2E7 1040 aa20.91■□□□□ 0.94
HDAC6-236ENST00000498808 DCTN1Q14203 1278 aa20.9■□□□□ 0.94
HDAC6-236ENST00000498808 RTF1Q92541 710 aaKnown RBP20.9■□□□□ 0.94
HDAC6-236ENST00000498808 RPGRQ92834 1020 aaKnown RBP20.9■□□□□ 0.94
HDAC6-236ENST00000498808 UBN2Q6ZU65 1347 aa20.89■□□□□ 0.93
HDAC6-236ENST00000498808 GRIPAP1Q4V328 841 aa20.89■□□□□ 0.93
HDAC6-236ENST00000498808 NIM1KQ8IY84 436 aa20.89■□□□□ 0.93
HDAC6-236ENST00000498808 GPRC5DQ9NZD1 345 aa20.89■□□□□ 0.93
HDAC6-236ENST00000498808 IBTKQ9P2D0 1353 aaPredicted RBP20.88■□□□□ 0.93
HDAC6-236ENST00000498808 TCERG1O14776 1098 aaKnown RBP20.88■□□□□ 0.93
HDAC6-236ENST00000498808 PPEF1O14829 653 aaPredicted RBP20.88■□□□□ 0.93
HDAC6-236ENST00000498808 CELF2O95319 508 aaKnown RBP20.88■□□□□ 0.93
HDAC6-236ENST00000498808 NGEFQ8N5V2 710 aa20.88■□□□□ 0.93
HDAC6-236ENST00000498808 CFAP44Q96MT7 982 aa20.88■□□□□ 0.93
HDAC6-236ENST00000498808 CRAMP1Q96RY5 1269 aa20.88■□□□□ 0.93
HDAC6-236ENST00000498808 ADARB2Q9NS39 739 aaKnown RBP20.88■□□□□ 0.93
HDAC6-236ENST00000498808 MAP3K15Q6ZN16 1313 aa20.87■□□□□ 0.93
HDAC6-236ENST00000498808 ERVV-1B6SEH8 477 aa20.87■□□□□ 0.93
HDAC6-236ENST00000498808 PPIP5K2O43314 1243 aa20.87■□□□□ 0.93
HDAC6-236ENST00000498808 CA12O43570 354 aa20.87■□□□□ 0.93
HDAC6-236ENST00000498808 AOC3Q16853 763 aa20.87■□□□□ 0.93
HDAC6-236ENST00000498808 C3orf67Q6ZVT6 689 aa20.87■□□□□ 0.93
HDAC6-236ENST00000498808 GLIS2Q9BZE0 524 aaPredicted RBP20.87■□□□□ 0.93
HDAC6-236ENST00000498808 GPTP24298 496 aa20.86■□□□□ 0.93
HDAC6-236ENST00000498808 BRPF1P55201 1214 aaPredicted RBP20.86■□□□□ 0.93
HDAC6-236ENST00000498808 TTLL7Q6ZT98 887 aa20.86■□□□□ 0.93
HDAC6-236ENST00000498808 RBM17Q96I25 401 aaKnown RBP20.86■□□□□ 0.93
HDAC6-236ENST00000498808 HHIPL1Q96JK4 782 aa20.86■□□□□ 0.93
HDAC6-236ENST00000498808 CXCL9Q07325 125 aa20.85■□□□□ 0.93
HDAC6-236ENST00000498808 SUSD4Q5VX71 490 aa20.85■□□□□ 0.93
HDAC6-236ENST00000498808 MIS18AQ9NYP9 233 aa20.85■□□□□ 0.93
HDAC6-236ENST00000498808 DGKZQ13574 1117 aa20.84■□□□□ 0.93
HDAC6-236ENST00000498808 TAF7Q15545 349 aaPredicted RBP20.84■□□□□ 0.93
HDAC6-236ENST00000498808 PGAP2Q9UHJ9 254 aa20.84■□□□□ 0.93
HDAC6-236ENST00000498808 PDE4DIPQ5VU43 2346 aa20.83■□□□□ 0.93
HDAC6-236ENST00000498808 HTATSF1O43719 755 aaKnown RBP20.83■□□□□ 0.93
HDAC6-236ENST00000498808 NTSR2O95665 410 aa20.83■□□□□ 0.93
HDAC6-236ENST00000498808 GMPSP49915 693 aaPredicted RBP20.83■□□□□ 0.93
HDAC6-236ENST00000498808 CIAPIN1Q6FI81 312 aa20.83■□□□□ 0.93
HDAC6-236ENST00000498808 KDM3BQ7LBC6 1761 aa20.82■□□□□ 0.92
HDAC6-236ENST00000498808 U2AF1L5P0DN76 240 aaPredicted RBP20.82■□□□□ 0.92
HDAC6-236ENST00000498808 HIRAP54198 1017 aaPredicted RBP20.82■□□□□ 0.92
HDAC6-236ENST00000498808 U2AF1Q01081 240 aaKnown RBP eCLIP20.82■□□□□ 0.92
HDAC6-236ENST00000498808 ZNF34Q8IZ26 560 aa20.82■□□□□ 0.92
HDAC6-236ENST00000498808 CFAP53Q96M91 514 aa20.82■□□□□ 0.92
HDAC6-236ENST00000498808 ZIC5Q96T25 663 aa20.82■□□□□ 0.92
HDAC6-236ENST00000498808 ZBTB3Q9H5J0 574 aa20.82■□□□□ 0.92
HDAC6-236ENST00000498808 ZNRF3Q9ULT6 936 aa20.82■□□□□ 0.92
HDAC6-236ENST00000498808 KIF6Q6ZMV9 814 aa20.81■□□□□ 0.92
HDAC6-236ENST00000498808 VPS33BQ9H267 617 aa20.81■□□□□ 0.92
HDAC6-236ENST00000498808 ZNF408Q9H9D4 720 aa20.81■□□□□ 0.92
HDAC6-236ENST00000498808 NUDCQ9Y266 331 aa20.81■□□□□ 0.92
HDAC6-236ENST00000498808 RRP7AQ9Y3A4 280 aaKnown RBP20.81■□□□□ 0.92
HDAC6-236ENST00000498808 ATP6V0A2Q9Y487 856 aa20.81■□□□□ 0.92
HDAC6-236ENST00000498808 TNRC18O15417 2968 aaPredicted RBP20.81■□□□□ 0.92
HDAC6-236ENST00000498808 TRPM4Q8TD43 1214 aa20.8■□□□□ 0.92
HDAC6-236ENST00000498808 RTFDC1Q9BY42 306 aaPredicted RBP20.8■□□□□ 0.92
HDAC6-236ENST00000498808 MYL6BP14649 208 aa20.79■□□□□ 0.92
HDAC6-236ENST00000498808 ZC3H15Q8WU90 426 aaKnown RBP20.79■□□□□ 0.92
HDAC6-236ENST00000498808 CDHR2Q9BYE9 1310 aa20.78■□□□□ 0.92
HDAC6-236ENST00000498808 ABCC4O15439 1325 aa20.78■□□□□ 0.92
HDAC6-236ENST00000498808 SHTN1A0MZ66 631 aa20.77■□□□□ 0.92
HDAC6-236ENST00000498808 EIF4A1P60842 406 aaKnown RBP20.77■□□□□ 0.92
HDAC6-236ENST00000498808 NOGQ13253 232 aa20.77■□□□□ 0.92
HDAC6-236ENST00000498808 GIGYF2Q6Y7W6 1299 aaKnown RBP20.77■□□□□ 0.92
HDAC6-236ENST00000498808 CDC37L1Q7L3B6 337 aa20.77■□□□□ 0.92
HDAC6-236ENST00000498808 SUPT20HQ8NEM7 779 aa20.77■□□□□ 0.92
HDAC6-236ENST00000498808 NLRP3Q96P20 1036 aa20.77■□□□□ 0.92
HDAC6-236ENST00000498808 DLG5Q8TDM6 1919 aa20.76■□□□□ 0.91
HDAC6-236ENST00000498808 RAD17O75943 681 aa20.76■□□□□ 0.91
HDAC6-236ENST00000498808 KIAA2012Q0VF49 1180 aa20.76■□□□□ 0.91
HDAC6-236ENST00000498808 BCL2L13Q9BXK5 485 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms