RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 SSH1Q8WYL5 1049 aa9.81□□□□□ -0.84
CDC42-205ENST00000498236 CARD10Q9BWT7 1032 aa9.81□□□□□ -0.84
CDC42-205ENST00000498236 RABGEF1Q9UJ41 708 aa9.81□□□□□ -0.84
CDC42-205ENST00000498236 SPG7Q9UQ90 795 aa9.81□□□□□ -0.84
CDC42-205ENST00000498236 PKD1L3Q7Z443 1732 aa9.81□□□□□ -0.84
CDC42-205ENST00000498236 MEGF6O75095 1541 aa9.81□□□□□ -0.84
CDC42-205ENST00000498236 KIF16BQ96L93 1317 aa9.81□□□□□ -0.84
CDC42-205ENST00000498236 CLK2P49760 499 aaKnown RBP9.8□□□□□ -0.84
CDC42-205ENST00000498236 TWISTNBQ3B726 338 aaPredicted RBP9.8□□□□□ -0.84
CDC42-205ENST00000498236 C1orf141Q5JVX7 400 aa9.8□□□□□ -0.84
CDC42-205ENST00000498236 C20orf194Q5TEA3 1177 aa9.8□□□□□ -0.84
CDC42-205ENST00000498236 PROCA1Q8NCQ7 364 aaPredicted RBP9.8□□□□□ -0.84
CDC42-205ENST00000498236 EXOC6Q8TAG9 804 aa9.8□□□□□ -0.84
CDC42-205ENST00000498236 ZMYND15Q9H091 742 aa9.8□□□□□ -0.84
CDC42-205ENST00000498236 SMC4Q9NTJ3 1288 aa9.8□□□□□ -0.84
CDC42-205ENST00000498236 IPO8O15397 1037 aaKnown RBP9.79□□□□□ -0.84
CDC42-205ENST00000498236 ZKSCAN2Q63HK3 967 aa9.79□□□□□ -0.84
CDC42-205ENST00000498236 TSPYL6Q8N831 410 aa9.79□□□□□ -0.84
CDC42-205ENST00000498236 C8orf58Q8NAV2 365 aa9.79□□□□□ -0.84
CDC42-205ENST00000498236 ANKK1Q8NFD2 765 aa9.79□□□□□ -0.84
CDC42-205ENST00000498236 SPIRE2Q8WWL2 714 aa9.79□□□□□ -0.84
CDC42-205ENST00000498236 ARHGAP45Q92619 1136 aa9.79□□□□□ -0.84
CDC42-205ENST00000498236 CRBNQ96SW2 442 aa9.79□□□□□ -0.84
CDC42-205ENST00000498236 TSPYL4Q9UJ04 414 aa9.79□□□□□ -0.84
CDC42-205ENST00000498236 PARP4Q9UKK3 1724 aaKnown RBP9.79□□□□□ -0.84
CDC42-205ENST00000498236 UBAP1LF5GYI3 381 aa9.78□□□□□ -0.84
CDC42-205ENST00000498236 RNMTO43148 476 aaKnown RBP9.78□□□□□ -0.84
CDC42-205ENST00000498236 HSP90AB1P08238 724 aaKnown RBP9.78□□□□□ -0.84
CDC42-205ENST00000498236 CANXP27824 592 aaKnown RBP9.78□□□□□ -0.84
CDC42-205ENST00000498236 TOM1L2Q6ZVM7 507 aa9.78□□□□□ -0.84
CDC42-205ENST00000498236 NUTM1Q86Y26 1132 aa9.78□□□□□ -0.84
CDC42-205ENST00000498236 PHKG2P15735 406 aa9.77□□□□□ -0.85
CDC42-205ENST00000498236 PIP4K2BP78356 416 aa9.77□□□□□ -0.85
CDC42-205ENST00000498236 ATF7IPQ6VMQ6 1270 aa9.77□□□□□ -0.85
CDC42-205ENST00000498236 IFNL2Q8IZJ0 200 aa9.77□□□□□ -0.85
CDC42-205ENST00000498236 RDH13Q8NBN7 331 aa9.77□□□□□ -0.85
CDC42-205ENST00000498236 FRAT1Q92837 279 aaPredicted RBP9.77□□□□□ -0.85
CDC42-205ENST00000498236 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.77□□□□□ -0.85
CDC42-205ENST00000498236 BCL2L13Q9BXK5 485 aa9.77□□□□□ -0.85
CDC42-205ENST00000498236 CHMP4AQ9BY43 222 aa9.77□□□□□ -0.85
CDC42-205ENST00000498236 LGR6Q9HBX8 967 aa9.77□□□□□ -0.85
CDC42-205ENST00000498236 MRC1P22897 1456 aa9.77□□□□□ -0.85
CDC42-205ENST00000498236 KDM3BQ7LBC6 1761 aa9.76□□□□□ -0.85
CDC42-205ENST00000498236 HOXB7P09629 217 aa9.76□□□□□ -0.85
CDC42-205ENST00000498236 TRIM27P14373 513 aa9.76□□□□□ -0.85
CDC42-205ENST00000498236 IL2RBP14784 551 aa9.76□□□□□ -0.85
CDC42-205ENST00000498236 EVA1CP58658 441 aa9.76□□□□□ -0.85
CDC42-205ENST00000498236 TEFQ10587 303 aa9.76□□□□□ -0.85
CDC42-205ENST00000498236 LARP1Q6PKG0 1096 aaKnown RBP9.76□□□□□ -0.85
CDC42-205ENST00000498236 LAPTM4BQ86VI4 370 aa9.76□□□□□ -0.85
CDC42-205ENST00000498236 DCAF5Q96JK2 942 aa9.76□□□□□ -0.85
CDC42-205ENST00000498236 CCDC136Q96JN2 1154 aa9.76□□□□□ -0.85
CDC42-205ENST00000498236 BTG4Q9NY30 223 aa9.76□□□□□ -0.85
CDC42-205ENST00000498236 NOB1Q9ULX3 412 aaKnown RBP9.76□□□□□ -0.85
CDC42-205ENST00000498236 SIPA1L3O60292 1781 aaPredicted RBP9.75□□□□□ -0.85
CDC42-205ENST00000498236 KDM6AO15550 1401 aaPredicted RBP9.75□□□□□ -0.85
CDC42-205ENST00000498236 CYP27B1O15528 508 aa9.75□□□□□ -0.85
CDC42-205ENST00000498236 B4GALNT3Q6L9W6 998 aa9.75□□□□□ -0.85
CDC42-205ENST00000498236 MPRIPQ6WCQ1 1025 aa9.75□□□□□ -0.85
CDC42-205ENST00000498236 NYAP1Q6ZVC0 841 aa9.75□□□□□ -0.85
CDC42-205ENST00000498236 RIC3Q7Z5B4 369 aa9.75□□□□□ -0.85
CDC42-205ENST00000498236 DZIP1LQ8IYY4 767 aaKnown RBP9.75□□□□□ -0.85
CDC42-205ENST00000498236 PANK1Q8TE04 598 aa9.75□□□□□ -0.85
CDC42-205ENST00000498236 MIS18AQ9NYP9 233 aa9.75□□□□□ -0.85
CDC42-205ENST00000498236 SEPT9Q9UHD8 586 aaPredicted RBP9.75□□□□□ -0.85
CDC42-205ENST00000498236 PCDH11XQ9BZA7 1347 aa9.75□□□□□ -0.85
CDC42-205ENST00000498236 PCDH11YQ9BZA8 1340 aa9.75□□□□□ -0.85
CDC42-205ENST00000498236 SCN11AQ9UI33 1791 aa9.75□□□□□ -0.85
CDC42-205ENST00000498236 JCADQ9P266 1359 aa9.75□□□□□ -0.85
CDC42-205ENST00000498236 HEG1Q9ULI3 1381 aa9.75□□□□□ -0.85
CDC42-205ENST00000498236 DISP2A7MBM2 1401 aa9.74□□□□□ -0.85
CDC42-205ENST00000498236 PLCH1Q4KWH8 1693 aa9.74□□□□□ -0.85
CDC42-205ENST00000498236 ELL2O00472 640 aaPredicted RBP9.74□□□□□ -0.85
CDC42-205ENST00000498236 ITGBL1O95965 494 aaPredicted RBP9.74□□□□□ -0.85
CDC42-205ENST00000498236 RLBP1P12271 317 aa9.74□□□□□ -0.85
CDC42-205ENST00000498236 MVPQ14764 893 aaKnown RBP9.74□□□□□ -0.85
CDC42-205ENST00000498236 KRT24Q2M2I5 525 aa9.74□□□□□ -0.85
CDC42-205ENST00000498236 SWT1Q5T5J6 900 aaKnown RBP9.74□□□□□ -0.85
CDC42-205ENST00000498236 ZCRB1Q8TBF4 217 aaKnown RBP9.74□□□□□ -0.85
CDC42-205ENST00000498236 STRN4Q9NRL3 753 aa9.74□□□□□ -0.85
CDC42-205ENST00000498236 LIMD1Q9UGP4 676 aa9.74□□□□□ -0.85
CDC42-205ENST00000498236 NWD2Q9ULI1 1742 aa9.73□□□□□ -0.85
CDC42-205ENST00000498236 VIRMAQ69YN4 1812 aaKnown RBP9.73□□□□□ -0.85
CDC42-205ENST00000498236 SLIT2O94813 1529 aa9.73□□□□□ -0.85
CDC42-205ENST00000498236 BTBD11A6QL63 1104 aa9.73□□□□□ -0.85
CDC42-205ENST00000498236 SPTLC1O15269 473 aa9.73□□□□□ -0.85
CDC42-205ENST00000498236 EIF4A1P60842 406 aaKnown RBP9.73□□□□□ -0.85
CDC42-205ENST00000498236 FAM98CQ17RN3 349 aaKnown RBP9.73□□□□□ -0.85
CDC42-205ENST00000498236 TUSC1Q2TAM9 212 aa9.73□□□□□ -0.85
CDC42-205ENST00000498236 FTSJ3Q8IY81 847 aaKnown RBP9.73□□□□□ -0.85
CDC42-205ENST00000498236 CDCA7Q9BWT1 371 aaPredicted RBP9.73□□□□□ -0.85
CDC42-205ENST00000498236 API5Q9BZZ5 524 aaKnown RBP9.73□□□□□ -0.85
CDC42-205ENST00000498236 SLC52A2Q9HAB3 445 aa9.73□□□□□ -0.85
CDC42-205ENST00000498236 COG6Q9Y2V7 657 aa9.73□□□□□ -0.85
CDC42-205ENST00000498236 ABCC4O15439 1325 aa9.73□□□□□ -0.85
CDC42-205ENST00000498236 PTPRCP08575 1304 aa9.73□□□□□ -0.85
CDC42-205ENST00000498236 NRAPQ86VF7 1730 aa9.73□□□□□ -0.85
CDC42-205ENST00000498236 ERVV-2B6SEH9 535 aa9.72□□□□□ -0.85
CDC42-205ENST00000498236 SLC4A3P48751 1232 aa9.72□□□□□ -0.85
CDC42-205ENST00000498236 CCDC30Q5VVM6 783 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms