RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 DTWD1Q8N5C7 304 aa7.31□□□□□ -1.24
PHC3-216ENST00000497171 NFATC2IPQ8NCF5 419 aa7.31□□□□□ -1.24
PHC3-216ENST00000497171 PIK3CDO00329 1044 aa7.3□□□□□ -1.24
PHC3-216ENST00000497171 ATP1A2P50993 1020 aa7.3□□□□□ -1.24
PHC3-216ENST00000497171 HIRAP54198 1017 aaPredicted RBP7.3□□□□□ -1.24
PHC3-216ENST00000497171 NCOA4Q13772 614 aa7.3□□□□□ -1.24
PHC3-216ENST00000497171 WWC1Q8IX03 1113 aa7.3□□□□□ -1.24
PHC3-216ENST00000497171 PHACTR1Q9C0D0 580 aa7.3□□□□□ -1.24
PHC3-216ENST00000497171 AFF1P51825 1210 aaKnown RBP7.29□□□□□ -1.24
PHC3-216ENST00000497171 C7orf43Q8WVR3 580 aa7.29□□□□□ -1.24
PHC3-216ENST00000497171 SUSD3Q96L08 255 aa7.29□□□□□ -1.24
PHC3-216ENST00000497171 SSBP4Q9BWG4 385 aaPredicted RBP7.29□□□□□ -1.24
PHC3-216ENST00000497171 DNAJB12Q9NXW2 375 aaKnown RBP7.29□□□□□ -1.24
PHC3-216ENST00000497171 HCN4Q9Y3Q4 1203 aa7.29□□□□□ -1.24
PHC3-216ENST00000497171 RBM19Q9Y4C8 960 aaKnown RBP7.29□□□□□ -1.24
PHC3-216ENST00000497171 BRPF1P55201 1214 aaPredicted RBP7.28□□□□□ -1.24
PHC3-216ENST00000497171 SH3PXD2AQ5TCZ1 1133 aa7.28□□□□□ -1.24
PHC3-216ENST00000497171 SLC51AQ86UW1 340 aa7.28□□□□□ -1.24
PHC3-216ENST00000497171 TPCN2Q8NHX9 752 aa7.28□□□□□ -1.24
PHC3-216ENST00000497171 WFDC12Q8WWY7 111 aa7.28□□□□□ -1.24
PHC3-216ENST00000497171 COBLO75128 1261 aa7.27□□□□□ -1.25
PHC3-216ENST00000497171 IREB2P48200 963 aaKnown RBP7.27□□□□□ -1.25
PHC3-216ENST00000497171 KRTAP19-1Q8IUB9 90 aa7.27□□□□□ -1.25
PHC3-216ENST00000497171 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.27□□□□□ -1.25
PHC3-216ENST00000497171 USP17L5A8MUK1 530 aa7.26□□□□□ -1.25
PHC3-216ENST00000497171 PPP1R12BO60237 982 aaPredicted RBP7.26□□□□□ -1.25
PHC3-216ENST00000497171 YBX3P16989 372 aaKnown RBP eCLIP7.26□□□□□ -1.25
PHC3-216ENST00000497171 MSL1Q68DK7 614 aa7.26□□□□□ -1.25
PHC3-216ENST00000497171 BTLAQ7Z6A9 289 aa7.26□□□□□ -1.25
PHC3-216ENST00000497171 FAM35AQ86V20 835 aa7.26□□□□□ -1.25
PHC3-216ENST00000497171 FBXO11Q86XK2 927 aa7.26□□□□□ -1.25
PHC3-216ENST00000497171 WFDC8Q8IUA0 241 aa7.26□□□□□ -1.25
PHC3-216ENST00000497171 KRTAP9-9Q9BYP9 154 aa7.26□□□□□ -1.25
PHC3-216ENST00000497171 KRTAP9-4Q9BYQ2 154 aa7.26□□□□□ -1.25
PHC3-216ENST00000497171 TSPAN10Q9H1Z9 355 aaPredicted RBP7.26□□□□□ -1.25
PHC3-216ENST00000497171 EPB42P16452 691 aa7.25□□□□□ -1.25
PHC3-216ENST00000497171 CCINQ13939 588 aa7.25□□□□□ -1.25
PHC3-216ENST00000497171 IGF2-ASQ6U949 168 aa7.25□□□□□ -1.25
PHC3-216ENST00000497171 ZNF280CQ8ND82 737 aa7.25□□□□□ -1.25
PHC3-216ENST00000497171 COL17A1Q9UMD9 1497 aaPredicted RBP7.24□□□□□ -1.25
PHC3-216ENST00000497171 PTCD1O75127 700 aaKnown RBP7.24□□□□□ -1.25
PHC3-216ENST00000497171 NFKB1P19838 968 aa7.24□□□□□ -1.25
PHC3-216ENST00000497171 ARID4AP29374 1257 aaPredicted RBP7.24□□□□□ -1.25
PHC3-216ENST00000497171 IRAK1P51617 712 aa7.24□□□□□ -1.25
PHC3-216ENST00000497171 CCDC102BQ68D86 513 aa7.24□□□□□ -1.25
PHC3-216ENST00000497171 PRR23CQ6ZRP0 262 aa7.24□□□□□ -1.25
PHC3-216ENST00000497171 DEPDC4Q8N2C3 294 aa7.24□□□□□ -1.25
PHC3-216ENST00000497171 FRRS1LQ9P0K9 344 aa7.24□□□□□ -1.25
PHC3-216ENST00000497171 NAGPAQ9UK23 515 aa7.24□□□□□ -1.25
PHC3-216ENST00000497171 M0R2N6 131 aa7.23□□□□□ -1.25
PHC3-216ENST00000497171 CPB1P15086 417 aa7.23□□□□□ -1.25
PHC3-216ENST00000497171 NOS3P29474 1203 aa7.23□□□□□ -1.25
PHC3-216ENST00000497171 ELMSAN1Q6PJG2 1045 aa7.23□□□□□ -1.25
PHC3-216ENST00000497171 DCAF11Q8TEB1 546 aa7.23□□□□□ -1.25
PHC3-216ENST00000497171 POTEAQ6S8J7 498 aa7.22□□□□□ -1.25
PHC3-216ENST00000497171 ALDH16A1Q8IZ83 802 aa7.22□□□□□ -1.25
PHC3-216ENST00000497171 FSTP19883 344 aa7.21□□□□□ -1.26
PHC3-216ENST00000497171 SSTR4P31391 388 aa7.21□□□□□ -1.26
PHC3-216ENST00000497171 IER5Q5VY09 327 aa7.21□□□□□ -1.26
PHC3-216ENST00000497171 NGLY1Q96IV0 654 aa7.21□□□□□ -1.26
PHC3-216ENST00000497171 MEGF10Q96KG7 1140 aa7.21□□□□□ -1.26
PHC3-216ENST00000497171 GSX2Q9BZM3 304 aa7.21□□□□□ -1.26
PHC3-216ENST00000497171 PALM3A6NDB9 673 aaPredicted RBP7.2□□□□□ -1.26
PHC3-216ENST00000497171 GSC2O15499 205 aa7.2□□□□□ -1.26
PHC3-216ENST00000497171 LARGE2Q8N3Y3 721 aa7.2□□□□□ -1.26
PHC3-216ENST00000497171 AKTIPQ9H8T0 292 aa7.2□□□□□ -1.26
PHC3-216ENST00000497171 KRTAP4-8A0A0G2JLE6 195 aa7.19□□□□□ -1.26
PHC3-216ENST00000497171 STAG2Q8N3U4 1231 aa7.19□□□□□ -1.26
PHC3-216ENST00000497171 GAS2L2Q8NHY3 880 aa7.19□□□□□ -1.26
PHC3-216ENST00000497171 ALG2Q9H553 416 aa7.19□□□□□ -1.26
PHC3-216ENST00000497171 TGFBR3LH3BV60 316 aa7.18□□□□□ -1.26
PHC3-216ENST00000497171 MAP3K6O95382 1288 aa7.18□□□□□ -1.26
PHC3-216ENST00000497171 PLEKHM2Q8IWE5 1019 aa7.18□□□□□ -1.26
PHC3-216ENST00000497171 CHMP7Q8WUX9 453 aaPredicted RBP7.18□□□□□ -1.26
PHC3-216ENST00000497171 LPIN3Q9BQK8 851 aa7.18□□□□□ -1.26
PHC3-216ENST00000497171 MRPL18Q9H0U6 180 aaKnown RBP7.18□□□□□ -1.26
PHC3-216ENST00000497171 USP17L3A6NCW0 530 aa7.17□□□□□ -1.26
PHC3-216ENST00000497171 USP17L4A6NCW7 530 aa7.17□□□□□ -1.26
PHC3-216ENST00000497171 CD97P48960 835 aa7.17□□□□□ -1.26
PHC3-216ENST00000497171 MCM6Q14566 821 aa7.17□□□□□ -1.26
PHC3-216ENST00000497171 RTN1Q16799 776 aa7.17□□□□□ -1.26
PHC3-216ENST00000497171 PERM1Q5SV97 790 aa7.17□□□□□ -1.26
PHC3-216ENST00000497171 USP17L2Q6R6M4 530 aa7.17□□□□□ -1.26
PHC3-216ENST00000497171 ILDR2Q71H61 639 aa7.17□□□□□ -1.26
PHC3-216ENST00000497171 DHX32Q7L7V1 743 aaKnown RBP7.17□□□□□ -1.26
PHC3-216ENST00000497171 USP17L1Q7RTZ2 530 aa7.17□□□□□ -1.26
PHC3-216ENST00000497171 OGFOD1Q8N543 542 aa7.17□□□□□ -1.26
PHC3-216ENST00000497171 TSEN2Q8NCE0 465 aaKnown RBP7.17□□□□□ -1.26
PHC3-216ENST00000497171 TTC9Q92623 222 aa7.17□□□□□ -1.26
PHC3-216ENST00000497171 FMNL2Q96PY5 1086 aa7.17□□□□□ -1.26
PHC3-216ENST00000497171 KIAA1024Q9UPX6 916 aa7.17□□□□□ -1.26
PHC3-216ENST00000497171 C2orf49Q9BVC5 232 aaPredicted RBP7.16□□□□□ -1.26
PHC3-216ENST00000497171 SRA1Q9HD15 236 aaKnown RBP7.16□□□□□ -1.26
PHC3-216ENST00000497171 ATAD2Q6PL18 1390 aa7.16□□□□□ -1.26
PHC3-216ENST00000497171 ZBTB7BO15156 539 aaPredicted RBP7.15□□□□□ -1.26
PHC3-216ENST00000497171 EIF2AK2P19525 551 aaKnown RBP7.15□□□□□ -1.26
PHC3-216ENST00000497171 CLDN10P78369 228 aa7.15□□□□□ -1.26
PHC3-216ENST00000497171 GPLD1P80108 840 aa7.15□□□□□ -1.26
PHC3-216ENST00000497171 KRT25Q7Z3Z0 450 aa7.15□□□□□ -1.26
PHC3-216ENST00000497171 DZIP1LQ8IYY4 767 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms