RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 CCDC174Q6PII3 467 aa11.11□□□□□ -0.63
RPSA-209ENST00000495394 FILIP1Q7Z7B0 1213 aa11.11□□□□□ -0.63
RPSA-209ENST00000495394 TAX1BP1Q86VP1 789 aa11.11□□□□□ -0.63
RPSA-209ENST00000495394 THEMISQ8N1K5 641 aaPredicted RBP11.11□□□□□ -0.63
RPSA-209ENST00000495394 MYO1HQ8N1T3 1032 aa11.11□□□□□ -0.63
RPSA-209ENST00000495394 FNBP4Q8N3X1 1017 aaPredicted RBP11.11□□□□□ -0.63
RPSA-209ENST00000495394 TDRD7Q8NHU6 1098 aaKnown RBP11.11□□□□□ -0.63
RPSA-209ENST00000495394 TNPO1Q92973 898 aaKnown RBP11.11□□□□□ -0.63
RPSA-209ENST00000495394 DUSP9Q99956 384 aaKnown RBP11.11□□□□□ -0.63
RPSA-209ENST00000495394 STAG3Q9UJ98 1225 aa11.11□□□□□ -0.63
RPSA-209ENST00000495394 TMA7Q9Y2S6 64 aaKnown RBP11.11□□□□□ -0.63
RPSA-209ENST00000495394 MTA2O94776 668 aa11.1□□□□□ -0.63
RPSA-209ENST00000495394 TNNT1P13805 278 aa11.1□□□□□ -0.63
RPSA-209ENST00000495394 ZNF132P52740 706 aa11.1□□□□□ -0.63
RPSA-209ENST00000495394 TRIM74Q86UV6 250 aa11.1□□□□□ -0.63
RPSA-209ENST00000495394 TRIM73Q86UV7 250 aa11.1□□□□□ -0.63
RPSA-209ENST00000495394 NT5DC4Q86YG4 428 aa11.1□□□□□ -0.63
RPSA-209ENST00000495394 STAG2Q8N3U4 1231 aa11.1□□□□□ -0.63
RPSA-209ENST00000495394 SFMBT1Q9UHJ3 866 aa11.1□□□□□ -0.63
RPSA-209ENST00000495394 CDC37L1Q7L3B6 337 aa11.1□□□□□ -0.63
RPSA-209ENST00000495394 MMTAG2Q9BU76 263 aaKnown RBP11.1□□□□□ -0.63
RPSA-209ENST00000495394 IRAK4Q9NWZ3 460 aa11.1□□□□□ -0.63
RPSA-209ENST00000495394 NOL7Q9UMY1 257 aaKnown RBP11.1□□□□□ -0.63
RPSA-209ENST00000495394 ARHGAP23Q9P227 1491 aa11.1□□□□□ -0.63
RPSA-209ENST00000495394 EIF4G2P78344 907 aaKnown RBP eCLIP11.09□□□□□ -0.63
RPSA-209ENST00000495394 MAP9Q49MG5 647 aa11.09□□□□□ -0.63
RPSA-209ENST00000495394 NLRP13Q86W25 1043 aa11.09□□□□□ -0.63
RPSA-209ENST00000495394 NGDNQ8NEJ9 315 aaKnown RBP11.09□□□□□ -0.63
RPSA-209ENST00000495394 IQCGQ9H095 443 aaKnown RBP11.09□□□□□ -0.63
RPSA-209ENST00000495394 TMEM63CQ9P1W3 806 aa11.09□□□□□ -0.63
RPSA-209ENST00000495394 MKRN1Q9UHC7 482 aaKnown RBP11.09□□□□□ -0.63
RPSA-209ENST00000495394 G3BP2Q9UN86 482 aaKnown RBP11.09□□□□□ -0.63
RPSA-209ENST00000495394 TBC1D2BQ9UPU7 963 aa11.09□□□□□ -0.63
RPSA-209ENST00000495394 ZNF335Q9H4Z2 1342 aaPredicted RBP11.09□□□□□ -0.63
RPSA-209ENST00000495394 IFT172Q9UG01 1749 aa11.09□□□□□ -0.63
RPSA-209ENST00000495394 LDHCP07864 332 aa11.08□□□□□ -0.63
RPSA-209ENST00000495394 HSPA5P11021 654 aaKnown RBP11.08□□□□□ -0.63
RPSA-209ENST00000495394 XBP1P17861 261 aa11.08□□□□□ -0.63
RPSA-209ENST00000495394 HSPA1LP34931 641 aa11.08□□□□□ -0.63
RPSA-209ENST00000495394 CLK1P49759 484 aaKnown RBP11.08□□□□□ -0.63
RPSA-209ENST00000495394 KCTD2Q14681 263 aa11.08□□□□□ -0.63
RPSA-209ENST00000495394 NKX1-1Q15270 411 aaPredicted RBP11.08□□□□□ -0.63
RPSA-209ENST00000495394 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.08□□□□□ -0.63
RPSA-209ENST00000495394 ANKRD13DQ6ZTN6 518 aa11.08□□□□□ -0.63
RPSA-209ENST00000495394 CCDC102AQ96A19 550 aa11.08□□□□□ -0.63
RPSA-209ENST00000495394 PPLO60437 1756 aa11.08□□□□□ -0.64
RPSA-209ENST00000495394 SHTN1A0MZ66 631 aa11.08□□□□□ -0.64
RPSA-209ENST00000495394 GOLGA6L6A8MZA4 724 aa11.08□□□□□ -0.64
RPSA-209ENST00000495394 TOM1O60784 492 aa11.08□□□□□ -0.64
RPSA-209ENST00000495394 STIP1P31948 543 aaKnown RBP11.08□□□□□ -0.64
RPSA-209ENST00000495394 MAN1A1P33908 653 aa11.08□□□□□ -0.64
RPSA-209ENST00000495394 WASHC5Q12768 1159 aa11.08□□□□□ -0.64
RPSA-209ENST00000495394 PTK7Q13308 1070 aa11.08□□□□□ -0.64
RPSA-209ENST00000495394 SLF2Q8IX21 1173 aa11.08□□□□□ -0.64
RPSA-209ENST00000495394 PLSCR2Q9NRY7 297 aa11.08□□□□□ -0.64
RPSA-209ENST00000495394 TMEM2Q9UHN6 1383 aa11.08□□□□□ -0.64
RPSA-209ENST00000495394 CARNS1A5YM72 827 aa11.07□□□□□ -0.64
RPSA-209ENST00000495394 PPFIA3O75145 1194 aa11.07□□□□□ -0.64
RPSA-209ENST00000495394 LONRF1Q17RB8 773 aa11.07□□□□□ -0.64
RPSA-209ENST00000495394 SPATA31E1Q6ZUB1 1445 aa11.07□□□□□ -0.64
RPSA-209ENST00000495394 NOP9Q86U38 636 aaKnown RBP11.07□□□□□ -0.64
RPSA-209ENST00000495394 TMCO5BA8MYB1 307 aa11.07□□□□□ -0.64
RPSA-209ENST00000495394 GTPBP6O43824 516 aaPredicted RBP11.07□□□□□ -0.64
RPSA-209ENST00000495394 PPP2R5AQ15172 486 aa11.07□□□□□ -0.64
RPSA-209ENST00000495394 ZNF771Q7L3S4 317 aaPredicted RBP11.07□□□□□ -0.64
RPSA-209ENST00000495394 BHMTQ93088 406 aa11.07□□□□□ -0.64
RPSA-209ENST00000495394 IL17RAQ96F46 866 aa11.07□□□□□ -0.64
RPSA-209ENST00000495394 TMOD4Q9NZQ9 345 aa11.07□□□□□ -0.64
RPSA-209ENST00000495394 CPS1P31327 1500 aa11.07□□□□□ -0.64
RPSA-209ENST00000495394 NEXMIFQ5QGS0 1516 aa11.07□□□□□ -0.64
RPSA-209ENST00000495394 ZFYVE9O95405 1425 aa11.06□□□□□ -0.64
RPSA-209ENST00000495394 KINO60870 393 aaKnown RBP11.06□□□□□ -0.64
RPSA-209ENST00000495394 OFD1O75665 1012 aa11.06□□□□□ -0.64
RPSA-209ENST00000495394 NFKBIBQ15653 356 aa11.06□□□□□ -0.64
RPSA-209ENST00000495394 EPAS1Q99814 870 aa11.06□□□□□ -0.64
RPSA-209ENST00000495394 ALDH8A1Q9H2A2 487 aaPredicted RBP11.06□□□□□ -0.64
RPSA-209ENST00000495394 SPC25Q9HBM1 224 aa11.06□□□□□ -0.64
RPSA-209ENST00000495394 ETAA1Q9NY74 926 aa11.06□□□□□ -0.64
RPSA-209ENST00000495394 SCAF11Q99590 1463 aaKnown RBP11.06□□□□□ -0.64
RPSA-209ENST00000495394 TLDC2A0PJX2 215 aa11.05□□□□□ -0.64
RPSA-209ENST00000495394 ZNF16P17020 682 aaPredicted RBP11.05□□□□□ -0.64
RPSA-209ENST00000495394 PDE6BP35913 854 aa11.05□□□□□ -0.64
RPSA-209ENST00000495394 MCM6Q14566 821 aa11.05□□□□□ -0.64
RPSA-209ENST00000495394 CCDC91Q7Z6B0 441 aa11.05□□□□□ -0.64
RPSA-209ENST00000495394 NAP1L4Q99733 375 aaKnown RBP11.05□□□□□ -0.64
RPSA-209ENST00000495394 RABL2AQ9UBK7 228 aaPredicted RBP11.05□□□□□ -0.64
RPSA-209ENST00000495394 USP25Q9UHP3 1055 aa11.05□□□□□ -0.64
RPSA-209ENST00000495394 TMCC3Q9ULS5 477 aa11.05□□□□□ -0.64
RPSA-209ENST00000495394 ITM2BQ9Y287 266 aa11.05□□□□□ -0.64
RPSA-209ENST00000495394 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.05□□□□□ -0.643e-17■■□□□ 11.8
RPSA-209ENST00000495394 IQGAP1P46940 1657 aa11.05□□□□□ -0.64
RPSA-209ENST00000495394 RIMS2Q9UQ26 1411 aa11.05□□□□□ -0.64
RPSA-209ENST00000495394 PABPN1LA6NDY0 278 aaKnown RBP11.05□□□□□ -0.64
RPSA-209ENST00000495394 GSCP56915 257 aaPredicted RBP11.05□□□□□ -0.64
RPSA-209ENST00000495394 ALDH1L2Q3SY69 923 aa11.05□□□□□ -0.64
RPSA-209ENST00000495394 LCA5Q86VQ0 697 aa11.05□□□□□ -0.64
RPSA-209ENST00000495394 CLASRPQ8N2M8 674 aaKnown RBP11.05□□□□□ -0.64
RPSA-209ENST00000495394 NEK9Q8TD19 979 aa11.05□□□□□ -0.64
RPSA-209ENST00000495394 POM121Q96HA1 1249 aa11.05□□□□□ -0.64
RPSA-209ENST00000495394 MED14O60244 1454 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms