RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 GMPRP36959 345 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 SCNN1AP37088 669 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 IDH3AP50213 366 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 KCNQ4P56696 695 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 TNP2Q05952 138 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 TYRO3Q06418 890 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 NAA30Q147X3 362 aaPredicted RBP4.27□□□□□ -1.73
LMNB1-207ENST00000494185 SLCO4C1Q6ZQN7 724 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 CAPN12Q6ZSI9 719 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 GLYCTKQ8IVS8 523 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 NEDD1Q8NHV4 660 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 DCAF11Q8TEB1 546 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 STK17AQ9UEE5 414 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 SEPT3Q9UH03 358 aa4.27□□□□□ -1.73
LMNB1-207ENST00000494185 PHF20L1A8MW92 1017 aa4.26□□□□□ -1.73
LMNB1-207ENST00000494185 EFSO43281 561 aa4.26□□□□□ -1.73
LMNB1-207ENST00000494185 NDUFB5O43674 189 aa4.26□□□□□ -1.73
LMNB1-207ENST00000494185 BNIP3LO60238 219 aa4.26□□□□□ -1.73
LMNB1-207ENST00000494185 BCRP11274 1271 aa4.26□□□□□ -1.73
LMNB1-207ENST00000494185 SPEM2Q0P670 501 aa4.26□□□□□ -1.73
LMNB1-207ENST00000494185 CCINQ13939 588 aa4.26□□□□□ -1.73
LMNB1-207ENST00000494185 NOM1Q5C9Z4 860 aaKnown RBP4.26□□□□□ -1.73
LMNB1-207ENST00000494185 COX20Q5RI15 118 aa4.26□□□□□ -1.73
LMNB1-207ENST00000494185 ZNF468Q5VIY5 522 aaPredicted RBP4.26□□□□□ -1.73
LMNB1-207ENST00000494185 KANK3Q6NY19 840 aa4.26□□□□□ -1.73
LMNB1-207ENST00000494185 TXNDC2Q86VQ3 553 aa4.26□□□□□ -1.73
LMNB1-207ENST00000494185 TREML1Q86YW5 311 aa4.26□□□□□ -1.73
LMNB1-207ENST00000494185 GTF3C2Q8WUA4 911 aaPredicted RBP4.26□□□□□ -1.73
LMNB1-207ENST00000494185 HSH2DQ96JZ2 352 aa4.26□□□□□ -1.73
LMNB1-207ENST00000494185 GNEQ9Y223 722 aaKnown RBP4.26□□□□□ -1.73
LMNB1-207ENST00000494185 ERBB4Q15303 1308 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 ZBTB7CA1YPR0 619 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 SIN3BO75182 1162 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 MICAL2O94851 1124 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 SLURP2P0DP57 97 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 CD33P20138 364 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 ZAP70P43403 619 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 SERPINB4P48594 390 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 MARSP56192 900 aaKnown RBP4.25□□□□□ -1.73
LMNB1-207ENST00000494185 FKBP4Q02790 459 aaKnown RBP eCLIP4.25□□□□□ -1.73
LMNB1-207ENST00000494185 PDE3BQ13370 1112 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 SCARF2Q96GP6 870 aaPredicted RBP4.25□□□□□ -1.73
LMNB1-207ENST00000494185 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 SAP130Q9H0E3 1048 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 NDFIP2Q9NV92 336 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 CUEDC1Q9NWM3 386 aaPredicted RBP4.25□□□□□ -1.73
LMNB1-207ENST00000494185 NOP53Q9NZM5 478 aaKnown RBP4.25□□□□□ -1.73
LMNB1-207ENST00000494185 KLK14Q9P0G3 267 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 LRFN2Q9ULH4 789 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 IVNS1ABPQ9Y6Y0 642 aa4.25□□□□□ -1.73
LMNB1-207ENST00000494185 PSAPP07602 524 aa4.24□□□□□ -1.73
LMNB1-207ENST00000494185 RARAP10276 462 aa4.24□□□□□ -1.73
LMNB1-207ENST00000494185 ITGAEP38570 1179 aa4.24□□□□□ -1.73
LMNB1-207ENST00000494185 ZNF211Q13398 564 aaPredicted RBP4.24□□□□□ -1.73
LMNB1-207ENST00000494185 PDE12Q6L8Q7 609 aaKnown RBP4.24□□□□□ -1.73
LMNB1-207ENST00000494185 ALYREFQ86V81 257 aaKnown RBP4.24□□□□□ -1.73
LMNB1-207ENST00000494185 RGL4Q8IZJ4 473 aa4.24□□□□□ -1.73
LMNB1-207ENST00000494185 C7orf43Q8WVR3 580 aa4.24□□□□□ -1.73
LMNB1-207ENST00000494185 PMEPA1Q969W9 287 aa4.24□□□□□ -1.73
LMNB1-207ENST00000494185 SPACA7Q96KW9 195 aa4.24□□□□□ -1.73
LMNB1-207ENST00000494185 UBE2OQ9C0C9 1292 aaKnown RBP4.24□□□□□ -1.73
LMNB1-207ENST00000494185 BRPF3Q9ULD4 1205 aa4.24□□□□□ -1.73
LMNB1-207ENST00000494185 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.24□□□□□ -1.73
LMNB1-207ENST00000494185 DNMT3AQ9Y6K1 912 aaPredicted RBP4.24□□□□□ -1.73
LMNB1-207ENST00000494185 H3BRB1 525 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 TNFRSF10BO14763 440 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 OIP5O43482 229 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 XYLBO75191 536 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 INPP5BP32019 993 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 FGD1P98174 961 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 MTMR3Q13615 1198 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 TTC39BQ5VTQ0 682 aaPredicted RBP4.23□□□□□ -1.73
LMNB1-207ENST00000494185 SYT9Q86SS6 491 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 CMTR1Q8N1G2 835 aaKnown RBP4.23□□□□□ -1.73
LMNB1-207ENST00000494185 MICALL1Q8N3F8 863 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 ZNF280CQ8ND82 737 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 BHMTQ93088 406 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 KLRG1Q96E93 195 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 CITED4Q96RK1 184 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 TUT1Q9H6E5 874 aaKnown RBP4.23□□□□□ -1.73
LMNB1-207ENST00000494185 RRAGCQ9HB90 399 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 ANO2Q9NQ90 1003 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 BIN2Q9UBW5 565 aaPredicted RBP4.23□□□□□ -1.73
LMNB1-207ENST00000494185 MKL2Q9ULH7 1088 aa4.23□□□□□ -1.73
LMNB1-207ENST00000494185 ELOA3CA0A087WX78 387 aaPredicted RBP4.22□□□□□ -1.73
LMNB1-207ENST00000494185 SOWAHDA6NJG2 315 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 ELOA3DA6NLF2 546 aaPredicted RBP4.22□□□□□ -1.73
LMNB1-207ENST00000494185 UBAP1LF5GYI3 381 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 EIF4EBP3O60516 100 aaPredicted RBP4.22□□□□□ -1.73
LMNB1-207ENST00000494185 ICMTO60725 284 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 MAP3K6O95382 1288 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 EGFRP00533 1210 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 GHRHP01286 108 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 THBS1P07996 1170 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 MPSTP25325 297 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 MZF1P28698 734 aaPredicted RBP4.22□□□□□ -1.73
LMNB1-207ENST00000494185 SOX18P35713 384 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 PLAURQ03405 335 aa4.22□□□□□ -1.73
LMNB1-207ENST00000494185 TBC1D8BQ0IIM8 1120 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms