RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 PROSER3Q2NL68 480 aa11.96□□□□□ -0.49
NFIA-213ENST00000493627 SUSD4Q5VX71 490 aa11.96□□□□□ -0.49
NFIA-213ENST00000493627 GIGYF2Q6Y7W6 1299 aaKnown RBP11.96□□□□□ -0.49
NFIA-213ENST00000493627 LRP10Q7Z4F1 713 aa11.96□□□□□ -0.49
NFIA-213ENST00000493627 CCDC146Q8IYE0 955 aa11.96□□□□□ -0.49
NFIA-213ENST00000493627 ZNF34Q8IZ26 560 aa11.96□□□□□ -0.49
NFIA-213ENST00000493627 RPGRQ92834 1020 aaKnown RBP11.96□□□□□ -0.49
NFIA-213ENST00000493627 L3MBTL3Q96JM7 780 aaPredicted RBP11.96□□□□□ -0.49
NFIA-213ENST00000493627 ANXA1P04083 346 aa11.95□□□□□ -0.5
NFIA-213ENST00000493627 POTEIP0CG38 1075 aa11.95□□□□□ -0.5
NFIA-213ENST00000493627 POTEJP0CG39 1038 aa11.95□□□□□ -0.5
NFIA-213ENST00000493627 PDIA6Q15084 440 aa11.95□□□□□ -0.5
NFIA-213ENST00000493627 CHADLQ6NUI6 762 aa11.95□□□□□ -0.5
NFIA-213ENST00000493627 HOXA10P31260 410 aaPredicted RBP11.94□□□□□ -0.5
NFIA-213ENST00000493627 WDR43Q15061 677 aaKnown RBP eCLIP11.94□□□□□ -0.5
NFIA-213ENST00000493627 NEUROD2Q15784 382 aa11.94□□□□□ -0.5
NFIA-213ENST00000493627 PARP10Q53GL7 1025 aa11.94□□□□□ -0.5
NFIA-213ENST00000493627 CC2D2BQ6DHV5 1058 aa11.94□□□□□ -0.5
NFIA-213ENST00000493627 PPP1R42Q7Z4L9 355 aa11.94□□□□□ -0.5
NFIA-213ENST00000493627 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
NFIA-213ENST00000493627 SYNE4Q8N205 404 aa11.94□□□□□ -0.5
NFIA-213ENST00000493627 PSMD1Q99460 953 aa11.94□□□□□ -0.5
NFIA-213ENST00000493627 TAF1DQ9H5J8 278 aaPredicted RBP11.94□□□□□ -0.5
NFIA-213ENST00000493627 SCN4AP35499 1836 aa11.93□□□□□ -0.5
NFIA-213ENST00000493627 PPEF1O14829 653 aaPredicted RBP11.93□□□□□ -0.5
NFIA-213ENST00000493627 C3orf67Q6ZVT6 689 aa11.93□□□□□ -0.5
NFIA-213ENST00000493627 LDHDQ86WU2 507 aa11.93□□□□□ -0.5
NFIA-213ENST00000493627 NECTIN2Q92692 538 aa11.93□□□□□ -0.5
NFIA-213ENST00000493627 RBM17Q96I25 401 aaKnown RBP11.93□□□□□ -0.5
NFIA-213ENST00000493627 PCNTO95613 3336 aa11.93□□□□□ -0.5
NFIA-213ENST00000493627 COL4A5P29400 1685 aa11.93□□□□□ -0.5
NFIA-213ENST00000493627 RNF123Q5XPI4 1314 aa11.92□□□□□ -0.5
NFIA-213ENST00000493627 FZD9O00144 591 aa11.92□□□□□ -0.5
NFIA-213ENST00000493627 KRT24Q2M2I5 525 aa11.92□□□□□ -0.5
NFIA-213ENST00000493627 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
NFIA-213ENST00000493627 SLC51AQ86UW1 340 aa11.92□□□□□ -0.5
NFIA-213ENST00000493627 XAGE3Q8WTP9 111 aa11.92□□□□□ -0.5
NFIA-213ENST00000493627 JDP2Q8WYK2 163 aa11.92□□□□□ -0.5
NFIA-213ENST00000493627 RUNDC1Q96C34 613 aa11.92□□□□□ -0.5
NFIA-213ENST00000493627 CRAMP1Q96RY5 1269 aa11.92□□□□□ -0.5
NFIA-213ENST00000493627 UTP14AQ9BVJ6 771 aaKnown RBP11.92□□□□□ -0.5
NFIA-213ENST00000493627 HACL1Q9UJ83 578 aa11.92□□□□□ -0.5
NFIA-213ENST00000493627 TRIM35Q9UPQ4 493 aa11.92□□□□□ -0.5
NFIA-213ENST00000493627 ANKRD36CQ5JPF3 1778 aa11.92□□□□□ -0.5
NFIA-213ENST00000493627 CHL1O00533 1208 aa11.91□□□□□ -0.5
NFIA-213ENST00000493627 EPHX2P34913 555 aa11.91□□□□□ -0.5
NFIA-213ENST00000493627 AIMP1Q12904 312 aaKnown RBP11.91□□□□□ -0.5
NFIA-213ENST00000493627 GRIPAP1Q4V328 841 aa11.91□□□□□ -0.5
NFIA-213ENST00000493627 EAPPQ56P03 285 aaPredicted RBP11.91□□□□□ -0.5
NFIA-213ENST00000493627 COPS6Q7L5N1 327 aa11.91□□□□□ -0.5
NFIA-213ENST00000493627 NLRP3Q96P20 1036 aa11.91□□□□□ -0.5
NFIA-213ENST00000493627 DDX21Q9NR30 783 aaKnown RBP eCLIP11.91□□□□□ -0.5
NFIA-213ENST00000493627 CREBZFQ9NS37 354 aa11.91□□□□□ -0.5
NFIA-213ENST00000493627 LAS1LQ9Y4W2 734 aaKnown RBP11.91□□□□□ -0.5
NFIA-213ENST00000493627 ADAMTSL1Q8N6G6 1762 aa11.91□□□□□ -0.5
NFIA-213ENST00000493627 ABCC4O15439 1325 aa11.9□□□□□ -0.5
NFIA-213ENST00000493627 PASKQ96RG2 1323 aa11.9□□□□□ -0.5
NFIA-213ENST00000493627 TCERG1O14776 1098 aaKnown RBP11.9□□□□□ -0.5
NFIA-213ENST00000493627 SLC10A5Q5PT55 438 aa11.9□□□□□ -0.5
NFIA-213ENST00000493627 NLRP10Q86W26 655 aa11.9□□□□□ -0.5
NFIA-213ENST00000493627 GPC2Q8N158 579 aa11.9□□□□□ -0.5
NFIA-213ENST00000493627 LARGE2Q8N3Y3 721 aa11.9□□□□□ -0.5
NFIA-213ENST00000493627 CHPF2Q9P2E5 772 aa11.9□□□□□ -0.5
NFIA-213ENST00000493627 ADAMTS8Q9UP79 889 aa11.9□□□□□ -0.5
NFIA-213ENST00000493627 HOXB7P09629 217 aa11.89□□□□□ -0.51
NFIA-213ENST00000493627 HSPA1AP0DMV8 641 aaKnown RBP11.89□□□□□ -0.51
NFIA-213ENST00000493627 HSPA1BP0DMV9 641 aaKnown RBP11.89□□□□□ -0.51
NFIA-213ENST00000493627 EIF6P56537 245 aaKnown RBP11.89□□□□□ -0.51
NFIA-213ENST00000493627 HDGFL1Q5TGJ6 251 aa11.89□□□□□ -0.51
NFIA-213ENST00000493627 PRKRIP1Q9H875 184 aaPredicted RBP11.89□□□□□ -0.51
NFIA-213ENST00000493627 ATP6V0A2Q9Y487 856 aa11.89□□□□□ -0.51
NFIA-213ENST00000493627 GJA3Q9Y6H8 435 aa11.89□□□□□ -0.51
NFIA-213ENST00000493627 PPIP5K2O43314 1243 aa11.88□□□□□ -0.51
NFIA-213ENST00000493627 HCLS1P14317 486 aaPredicted RBP11.88□□□□□ -0.51
NFIA-213ENST00000493627 TCIRG1Q13488 830 aa11.88□□□□□ -0.51
NFIA-213ENST00000493627 COL13A1Q5TAT6 717 aaPredicted RBP11.88□□□□□ -0.51
NFIA-213ENST00000493627 PNMA8AQ86V59 439 aaPredicted RBP11.88□□□□□ -0.51
NFIA-213ENST00000493627 NIM1KQ8IY84 436 aa11.88□□□□□ -0.51
NFIA-213ENST00000493627 TMX4Q9H1E5 349 aaPredicted RBP11.88□□□□□ -0.51
NFIA-213ENST00000493627 MKRN1Q9UHC7 482 aaKnown RBP11.88□□□□□ -0.51
NFIA-213ENST00000493627 TRMT112Q9UI30 125 aaKnown RBP11.88□□□□□ -0.51
NFIA-213ENST00000493627 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
NFIA-213ENST00000493627 CNTNAP1P78357 1384 aa11.88□□□□□ -0.51
NFIA-213ENST00000493627 LTBP1Q14766 1721 aa11.88□□□□□ -0.51
NFIA-213ENST00000493627 SH3TC1Q8TE82 1336 aa11.87□□□□□ -0.51
NFIA-213ENST00000493627 LAMB2P55268 1798 aa11.87□□□□□ -0.51
NFIA-213ENST00000493627 ITGBL1O95965 494 aaPredicted RBP11.87□□□□□ -0.51
NFIA-213ENST00000493627 LMOD1P29536 600 aaPredicted RBP11.87□□□□□ -0.51
NFIA-213ENST00000493627 CFAP44Q96MT7 982 aa11.87□□□□□ -0.51
NFIA-213ENST00000493627 SCNN1DP51172 638 aa11.86□□□□□ -0.51
NFIA-213ENST00000493627 AOC3Q16853 763 aa11.86□□□□□ -0.51
NFIA-213ENST00000493627 MAP1SQ66K74 1059 aaPredicted RBP11.86□□□□□ -0.51
NFIA-213ENST00000493627 PLBD2Q8NHP8 589 aa11.86□□□□□ -0.51
NFIA-213ENST00000493627 MBIPQ9NS73 344 aa11.86□□□□□ -0.51
NFIA-213ENST00000493627 DBF4Q9UBU7 674 aaPredicted RBP11.86□□□□□ -0.51
NFIA-213ENST00000493627 TMEM88BA6NKF7 163 aa11.85□□□□□ -0.51
NFIA-213ENST00000493627 BBOX1O75936 387 aa11.85□□□□□ -0.51
NFIA-213ENST00000493627 GRAPQ13588 217 aa11.85□□□□□ -0.51
NFIA-213ENST00000493627 DUSP27Q5VZP5 1158 aa11.85□□□□□ -0.51
NFIA-213ENST00000493627 DPP8Q6V1X1 898 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms