RNA–Protein interactions for RNA: ENST00000492878.1

EPHB4-209, Transcript of EPH receptor B4, humanhuman

TSL 5

Gene EPHB4, Length 769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-209ENST00000492878 SNRPA1P09661 255 aaKnown RBP20.49■□□□□ 0.87
EPHB4-209ENST00000492878 LMOD1P29536 600 aaPredicted RBP20.49■□□□□ 0.87
EPHB4-209ENST00000492878 PDE4DIPQ5VU43 2346 aa20.49■□□□□ 0.87
EPHB4-209ENST00000492878 RIC1Q4ADV7 1423 aa20.48■□□□□ 0.87
EPHB4-209ENST00000492878 CA12O43570 354 aa20.48■□□□□ 0.87
EPHB4-209ENST00000492878 GRIPAP1Q4V328 841 aa20.48■□□□□ 0.87
EPHB4-209ENST00000492878 MCOLN1Q9GZU1 580 aa20.48■□□□□ 0.87
EPHB4-209ENST00000492878 TSKSQ9UJT2 592 aa20.48■□□□□ 0.87
EPHB4-209ENST00000492878 GJA3Q9Y6H8 435 aa20.48■□□□□ 0.87
EPHB4-209ENST00000492878 ABCC12Q96J65 1359 aa20.47■□□□□ 0.87
EPHB4-209ENST00000492878 AOC2O75106 756 aa20.47■□□□□ 0.87
EPHB4-209ENST00000492878 HOXA10P31260 410 aaPredicted RBP20.47■□□□□ 0.87
EPHB4-209ENST00000492878 PAXIP1Q6ZW49 1069 aaPredicted RBP20.47■□□□□ 0.87
EPHB4-209ENST00000492878 SAPCD2Q86UD0 394 aa20.47■□□□□ 0.87
EPHB4-209ENST00000492878 HHIPL1Q96JK4 782 aa20.47■□□□□ 0.87
EPHB4-209ENST00000492878 HLFQ16534 295 aa20.46■□□□□ 0.87
EPHB4-209ENST00000492878 PHACTR3Q96KR7 559 aa20.46■□□□□ 0.87
EPHB4-209ENST00000492878 KIF7Q2M1P5 1343 aa20.45■□□□□ 0.86
EPHB4-209ENST00000492878 CASP8AP2Q9UKL3 1982 aa20.45■□□□□ 0.86
EPHB4-209ENST00000492878 FAM177BA6PVY3 158 aa20.44■□□□□ 0.86
EPHB4-209ENST00000492878 U2SURPO15042 1029 aaKnown RBP20.44■□□□□ 0.86
EPHB4-209ENST00000492878 BRPF1P55201 1214 aaPredicted RBP20.44■□□□□ 0.86
EPHB4-209ENST00000492878 GRM1Q13255 1194 aa20.44■□□□□ 0.86
EPHB4-209ENST00000492878 LARGE2Q8N3Y3 721 aa20.43■□□□□ 0.86
EPHB4-209ENST00000492878 GPRC5DQ9NZD1 345 aa20.43■□□□□ 0.86
EPHB4-209ENST00000492878 PGAP2Q9UHJ9 254 aa20.43■□□□□ 0.86
EPHB4-209ENST00000492878 IBTKQ9P2D0 1353 aaPredicted RBP20.43■□□□□ 0.86
EPHB4-209ENST00000492878 NPC1L1Q9UHC9 1359 aa20.43■□□□□ 0.86
EPHB4-209ENST00000492878 CC2D1BQ5T0F9 858 aaKnown RBP20.42■□□□□ 0.86
EPHB4-209ENST00000492878 SLC51AQ86UW1 340 aa20.42■□□□□ 0.86
EPHB4-209ENST00000492878 NYXQ9GZU5 481 aa20.42■□□□□ 0.86
EPHB4-209ENST00000492878 RSPH6AQ9H0K4 717 aa20.42■□□□□ 0.86
EPHB4-209ENST00000492878 ADARB2Q9NS39 739 aaKnown RBP20.42■□□□□ 0.86
EPHB4-209ENST00000492878 LAMB4A4D0S4 1761 aa20.41■□□□□ 0.86
EPHB4-209ENST00000492878 NUP98P52948 1817 aa20.41■□□□□ 0.86
EPHB4-209ENST00000492878 GTF2E1P29083 439 aaPredicted RBP20.41■□□□□ 0.86
EPHB4-209ENST00000492878 CRAMP1Q96RY5 1269 aa20.41■□□□□ 0.86
EPHB4-209ENST00000492878 ERVV-1B6SEH8 477 aa20.4■□□□□ 0.86
EPHB4-209ENST00000492878 CELF2O95319 508 aaKnown RBP20.4■□□□□ 0.86
EPHB4-209ENST00000492878 PRKAR2BP31323 418 aa20.4■□□□□ 0.86
EPHB4-209ENST00000492878 NUTM1Q86Y26 1132 aa20.4■□□□□ 0.86
EPHB4-209ENST00000492878 VPS33BQ9H267 617 aa20.4■□□□□ 0.86
EPHB4-209ENST00000492878 NIM1KQ8IY84 436 aa20.39■□□□□ 0.85
EPHB4-209ENST00000492878 RPGRQ92834 1020 aaKnown RBP20.38■□□□□ 0.85
EPHB4-209ENST00000492878 PPEF1O14829 653 aaPredicted RBP20.37■□□□□ 0.85
EPHB4-209ENST00000492878 DGKZQ13574 1117 aa20.37■□□□□ 0.85
EPHB4-209ENST00000492878 MCM10Q7L590 875 aa20.37■□□□□ 0.85
EPHB4-209ENST00000492878 GLIS2Q9BZE0 524 aaPredicted RBP20.37■□□□□ 0.85
EPHB4-209ENST00000492878 UBN2Q6ZU65 1347 aa20.36■□□□□ 0.85
EPHB4-209ENST00000492878 CDHR2Q9BYE9 1310 aa20.36■□□□□ 0.85
EPHB4-209ENST00000492878 CXCL9Q07325 125 aa20.36■□□□□ 0.85
EPHB4-209ENST00000492878 CIAPIN1Q6FI81 312 aa20.36■□□□□ 0.85
EPHB4-209ENST00000492878 ZC3H15Q8WU90 426 aaKnown RBP20.36■□□□□ 0.85
EPHB4-209ENST00000492878 RBM17Q96I25 401 aaKnown RBP20.36■□□□□ 0.85
EPHB4-209ENST00000492878 RTFDC1Q9BY42 306 aaPredicted RBP20.36■□□□□ 0.85
EPHB4-209ENST00000492878 MAP3K15Q6ZN16 1313 aa20.35■□□□□ 0.85
EPHB4-209ENST00000492878 PPIP5K2O43314 1243 aa20.35■□□□□ 0.85
EPHB4-209ENST00000492878 CFAP44Q96MT7 982 aa20.35■□□□□ 0.85
EPHB4-209ENST00000492878 ZNRF3Q9ULT6 936 aa20.35■□□□□ 0.85
EPHB4-209ENST00000492878 HTATSF1O43719 755 aaKnown RBP20.34■□□□□ 0.85
EPHB4-209ENST00000492878 GMPSP49915 693 aaPredicted RBP20.34■□□□□ 0.85
EPHB4-209ENST00000492878 HIRAP54198 1017 aaPredicted RBP20.34■□□□□ 0.85
EPHB4-209ENST00000492878 AOC3Q16853 763 aa20.34■□□□□ 0.85
EPHB4-209ENST00000492878 C3orf67Q6ZVT6 689 aa20.34■□□□□ 0.85
EPHB4-209ENST00000492878 ZIC5Q96T25 663 aa20.34■□□□□ 0.85
EPHB4-209ENST00000492878 ATP6V0A2Q9Y487 856 aa20.34■□□□□ 0.85
EPHB4-209ENST00000492878 NTSR2O95665 410 aa20.33■□□□□ 0.85
EPHB4-209ENST00000492878 NOGQ13253 232 aa20.33■□□□□ 0.85
EPHB4-209ENST00000492878 SUSD4Q5VX71 490 aa20.33■□□□□ 0.85
EPHB4-209ENST00000492878 ZNF34Q8IZ26 560 aa20.33■□□□□ 0.85
EPHB4-209ENST00000492878 RTF1Q92541 710 aaKnown RBP20.33■□□□□ 0.85
EPHB4-209ENST00000492878 TTLL7Q6ZT98 887 aa20.32■□□□□ 0.84
EPHB4-209ENST00000492878 KDM3BQ7LBC6 1761 aa20.31■□□□□ 0.84
EPHB4-209ENST00000492878 DCTN1Q14203 1278 aa20.31■□□□□ 0.84
EPHB4-209ENST00000492878 TAF7Q15545 349 aaPredicted RBP20.31■□□□□ 0.84
EPHB4-209ENST00000492878 CDC37L1Q7L3B6 337 aa20.31■□□□□ 0.84
EPHB4-209ENST00000492878 SAGE1Q9NXZ1 904 aa20.3■□□□□ 0.84
EPHB4-209ENST00000492878 FAM155AB1AL88 458 aaPredicted RBP20.29■□□□□ 0.84
EPHB4-209ENST00000492878 TCERG1O14776 1098 aaKnown RBP20.29■□□□□ 0.84
EPHB4-209ENST00000492878 GPTP24298 496 aa20.29■□□□□ 0.84
EPHB4-209ENST00000492878 KIAA2012Q0VF49 1180 aa20.29■□□□□ 0.84
EPHB4-209ENST00000492878 SLC10A5Q5PT55 438 aa20.29■□□□□ 0.84
EPHB4-209ENST00000492878 SUPT20HQ8NEM7 779 aa20.29■□□□□ 0.84
EPHB4-209ENST00000492878 TRPM4Q8TD43 1214 aa20.29■□□□□ 0.84
EPHB4-209ENST00000492878 KIF6Q6ZMV9 814 aa20.28■□□□□ 0.84
EPHB4-209ENST00000492878 ABCC4O15439 1325 aa20.27■□□□□ 0.84
EPHB4-209ENST00000492878 HUNKP57058 714 aa20.27■□□□□ 0.84
EPHB4-209ENST00000492878 NGEFQ8N5V2 710 aa20.27■□□□□ 0.84
EPHB4-209ENST00000492878 ZNF408Q9H9D4 720 aa20.27■□□□□ 0.84
EPHB4-209ENST00000492878 MIS18AQ9NYP9 233 aa20.27■□□□□ 0.84
EPHB4-209ENST00000492878 TNIP1Q15025 636 aa20.26■□□□□ 0.83
EPHB4-209ENST00000492878 GIGYF2Q6Y7W6 1299 aaKnown RBP20.26■□□□□ 0.83
EPHB4-209ENST00000492878 SP8Q8IXZ3 490 aa20.26■□□□□ 0.83
EPHB4-209ENST00000492878 NLRP3Q96P20 1036 aa20.26■□□□□ 0.83
EPHB4-209ENST00000492878 ZBTB3Q9H5J0 574 aa20.26■□□□□ 0.83
EPHB4-209ENST00000492878 DUOX1Q9NRD9 1551 aa20.25■□□□□ 0.83
EPHB4-209ENST00000492878 SHTN1A0MZ66 631 aa20.25■□□□□ 0.83
EPHB4-209ENST00000492878 PARP10Q53GL7 1025 aa20.25■□□□□ 0.83
EPHB4-209ENST00000492878 CFAP53Q96M91 514 aa20.25■□□□□ 0.83
EPHB4-209ENST00000492878 CNOT7Q9UIV1 285 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms