RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MAPK8P45983 427 aa6.74□□□□□ -1.33
CLK1-213ENST00000492793 TYRO3Q06418 890 aa6.74□□□□□ -1.33
CLK1-213ENST00000492793 LBRQ14739 615 aaKnown RBP6.74□□□□□ -1.33
CLK1-213ENST00000492793 DBN1Q16643 649 aa6.74□□□□□ -1.33
CLK1-213ENST00000492793 DNAJC14Q6Y2X3 702 aaPredicted RBP6.74□□□□□ -1.33
CLK1-213ENST00000492793 TMC7Q7Z402 723 aa6.74□□□□□ -1.33
CLK1-213ENST00000492793 CITED4Q96RK1 184 aa6.74□□□□□ -1.33
CLK1-213ENST00000492793 RBCK1Q9BYM8 510 aa6.74□□□□□ -1.33
CLK1-213ENST00000492793 DMGDHQ9UI17 866 aaKnown RBP6.74□□□□□ -1.33
CLK1-213ENST00000492793 FNDC3AQ9Y2H6 1198 aaKnown RBP6.74□□□□□ -1.33
CLK1-213ENST00000492793 PCDHGC4Q9Y5F7 938 aa6.74□□□□□ -1.33
CLK1-213ENST00000492793 INPP5BP32019 993 aa6.73□□□□□ -1.33
CLK1-213ENST00000492793 RBM25P49756 843 aaKnown RBP6.73□□□□□ -1.33
CLK1-213ENST00000492793 FOXR1Q6PIV2 292 aa6.73□□□□□ -1.33
CLK1-213ENST00000492793 TRIM22Q8IYM9 498 aa6.73□□□□□ -1.33
CLK1-213ENST00000492793 GTPBP3Q969Y2 492 aaKnown RBP6.73□□□□□ -1.33
CLK1-213ENST00000492793 DMRTB1Q96MA1 342 aa6.73□□□□□ -1.33
CLK1-213ENST00000492793 BCL2L13Q9BXK5 485 aa6.73□□□□□ -1.33
CLK1-213ENST00000492793 NIF3L1Q9GZT8 377 aa6.73□□□□□ -1.33
CLK1-213ENST00000492793 CUEDC1Q9NWM3 386 aaPredicted RBP6.73□□□□□ -1.33
CLK1-213ENST00000492793 POTECB2RU33 542 aa6.72□□□□□ -1.33
CLK1-213ENST00000492793 PPFIA3O75145 1194 aa6.72□□□□□ -1.33
CLK1-213ENST00000492793 PLCB3Q01970 1234 aa6.72□□□□□ -1.33
CLK1-213ENST00000492793 EHHADHQ08426 723 aa6.72□□□□□ -1.33
CLK1-213ENST00000492793 KRT25Q7Z3Z0 450 aa6.72□□□□□ -1.33
CLK1-213ENST00000492793 ZNF438Q7Z4V0 828 aa6.72□□□□□ -1.33
CLK1-213ENST00000492793 NPM2Q86SE8 214 aaKnown RBP6.72□□□□□ -1.33
CLK1-213ENST00000492793 VWA5B2Q8N398 1253 aa6.72□□□□□ -1.33
CLK1-213ENST00000492793 ZNF837Q96EG3 531 aaPredicted RBP6.72□□□□□ -1.33
CLK1-213ENST00000492793 ABHD17AQ96GS6 310 aa6.72□□□□□ -1.33
CLK1-213ENST00000492793 TRERF1Q96PN7 1200 aa6.72□□□□□ -1.33
CLK1-213ENST00000492793 GGNBP2Q9H3C7 697 aa6.72□□□□□ -1.33
CLK1-213ENST00000492793 KCNH4Q9UQ05 1017 aa6.72□□□□□ -1.33
CLK1-213ENST00000492793 GPR25O00155 361 aa6.71□□□□□ -1.34
CLK1-213ENST00000492793 XYLBO75191 536 aa6.71□□□□□ -1.34
CLK1-213ENST00000492793 VEGFBP49765 207 aa6.71□□□□□ -1.34
CLK1-213ENST00000492793 SFSWAPQ12872 951 aaKnown RBP6.71□□□□□ -1.34
CLK1-213ENST00000492793 SAMD5Q5TGI4 173 aa6.71□□□□□ -1.34
CLK1-213ENST00000492793 GIPC2Q8TF65 315 aa6.71□□□□□ -1.34
CLK1-213ENST00000492793 PNMA5Q96PV4 448 aa6.71□□□□□ -1.34
CLK1-213ENST00000492793 PHF24Q9UPV7 400 aa6.71□□□□□ -1.34
CLK1-213ENST00000492793 BNIP3LO60238 219 aa6.7□□□□□ -1.34
CLK1-213ENST00000492793 FAM157BP0CG42 384 aa6.7□□□□□ -1.34
CLK1-213ENST00000492793 MAPTP10636 758 aaKnown RBP6.7□□□□□ -1.34
CLK1-213ENST00000492793 CD33P20138 364 aa6.7□□□□□ -1.34
CLK1-213ENST00000492793 EAPPQ56P03 285 aaPredicted RBP6.7□□□□□ -1.34
CLK1-213ENST00000492793 SV2AQ7L0J3 742 aa6.7□□□□□ -1.34
CLK1-213ENST00000492793 NPAS4Q8IUM7 802 aa6.7□□□□□ -1.34
CLK1-213ENST00000492793 GJD3Q8N144 294 aa6.7□□□□□ -1.34
CLK1-213ENST00000492793 GMCL1Q96IK5 515 aa6.7□□□□□ -1.34
CLK1-213ENST00000492793 FAM129BQ96TA1 746 aa6.7□□□□□ -1.34
CLK1-213ENST00000492793 MARK1Q9P0L2 795 aa6.7□□□□□ -1.34
CLK1-213ENST00000492793 GPR182O15218 404 aa6.69□□□□□ -1.34
CLK1-213ENST00000492793 SASH3O75995 380 aa6.69□□□□□ -1.34
CLK1-213ENST00000492793 NEFLP07196 543 aa6.69□□□□□ -1.34
CLK1-213ENST00000492793 THBS1P07996 1170 aa6.69□□□□□ -1.34
CLK1-213ENST00000492793 TNP2Q05952 138 aa6.69□□□□□ -1.34
CLK1-213ENST00000492793 TRIP4Q15650 581 aaPredicted RBP6.69□□□□□ -1.34
CLK1-213ENST00000492793 ZNF428Q96B54 188 aa6.69□□□□□ -1.34
CLK1-213ENST00000492793 KCNMB2Q9Y691 235 aa6.69□□□□□ -1.34
CLK1-213ENST00000492793 TREHO43280 583 aa6.68□□□□□ -1.34
CLK1-213ENST00000492793 FGFR3P22607 806 aa6.68□□□□□ -1.34
CLK1-213ENST00000492793 ATP2B2Q01814 1243 aa6.68□□□□□ -1.34
CLK1-213ENST00000492793 ORC1Q13415 861 aa6.68□□□□□ -1.34
CLK1-213ENST00000492793 CCINQ13939 588 aa6.68□□□□□ -1.34
CLK1-213ENST00000492793 ZNF326Q5BKZ1 582 aaKnown RBP6.68□□□□□ -1.34
CLK1-213ENST00000492793 TTC39BQ5VTQ0 682 aaPredicted RBP6.68□□□□□ -1.34
CLK1-213ENST00000492793 ZNF787Q6DD87 383 aa6.68□□□□□ -1.34
CLK1-213ENST00000492793 RAB44Q7Z6P3 723 aaPredicted RBP6.68□□□□□ -1.34
CLK1-213ENST00000492793 BCL11AQ9H165 835 aa6.68□□□□□ -1.34
CLK1-213ENST00000492793 STRN4Q9NRL3 753 aa6.68□□□□□ -1.34
CLK1-213ENST00000492793 ATXN7L1Q9ULK2 861 aaPredicted RBP6.68□□□□□ -1.34
CLK1-213ENST00000492793 PNMA6FA0A0J9YX94 578 aa6.67□□□□□ -1.34
CLK1-213ENST00000492793 PHACTR2O75167 634 aa6.67□□□□□ -1.34
CLK1-213ENST00000492793 P4HBP07237 508 aaKnown RBP6.67□□□□□ -1.34
CLK1-213ENST00000492793 SPEM2Q0P670 501 aa6.67□□□□□ -1.34
CLK1-213ENST00000492793 PDE12Q6L8Q7 609 aaKnown RBP6.67□□□□□ -1.34
CLK1-213ENST00000492793 BHMTQ93088 406 aa6.67□□□□□ -1.34
CLK1-213ENST00000492793 ELP3Q9H9T3 547 aa6.67□□□□□ -1.34
CLK1-213ENST00000492793 NXF1Q9UBU9 619 aaKnown RBP6.67□□□□□ -1.34
CLK1-213ENST00000492793 FOXD3Q9UJU5 478 aaPredicted RBP6.67□□□□□ -1.34
CLK1-213ENST00000492793 PRR12Q9ULL5 1215 aa6.67□□□□□ -1.34
CLK1-213ENST00000492793 AMOTL2Q9Y2J4 779 aa6.67□□□□□ -1.34
CLK1-213ENST00000492793 EFSO43281 561 aa6.66□□□□□ -1.34
CLK1-213ENST00000492793 LDHBP07195 334 aaKnown RBP6.66□□□□□ -1.34
CLK1-213ENST00000492793 RARAP10276 462 aa6.66□□□□□ -1.34
CLK1-213ENST00000492793 NFKB1P19838 968 aa6.66□□□□□ -1.34
CLK1-213ENST00000492793 TARSP26639 723 aaKnown RBP6.66□□□□□ -1.34
CLK1-213ENST00000492793 GRNP28799 593 aaKnown RBP6.66□□□□□ -1.34
CLK1-213ENST00000492793 TBC1D8BQ0IIM8 1120 aa6.66□□□□□ -1.34
CLK1-213ENST00000492793 NEUROD1Q13562 356 aa6.66□□□□□ -1.34
CLK1-213ENST00000492793 LAMC2Q13753 1193 aa6.66□□□□□ -1.34
CLK1-213ENST00000492793 UBAP2LQ14157 1087 aaKnown RBP6.66□□□□□ -1.34
CLK1-213ENST00000492793 GRIN2CQ14957 1233 aa6.66□□□□□ -1.34
CLK1-213ENST00000492793 NLRP13Q86W25 1043 aa6.66□□□□□ -1.34
CLK1-213ENST00000492793 IGFLR1Q9H665 355 aa6.66□□□□□ -1.34
CLK1-213ENST00000492793 ABI2Q9NYB9 513 aaPredicted RBP6.66□□□□□ -1.34
CLK1-213ENST00000492793 TMEM63CQ9P1W3 806 aa6.66□□□□□ -1.34
CLK1-213ENST00000492793 TNFRSF21O75509 655 aa6.65□□□□□ -1.34
CLK1-213ENST00000492793 KCNQ4P56696 695 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms