RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 KIAA1468Q9P260 1216 aa9.86□□□□□ -0.83
PRPF4B-208ENST00000490653 SRP68Q9UHB9 627 aaKnown RBP9.86□□□□□ -0.83
PRPF4B-208ENST00000490653 RPS6KA4O75676 772 aa9.85□□□□□ -0.83
PRPF4B-208ENST00000490653 SSFA2P28290 1259 aa9.85□□□□□ -0.83
PRPF4B-208ENST00000490653 TRAPPC3LQ5T215 181 aa9.85□□□□□ -0.83
PRPF4B-208ENST00000490653 RC3H1Q5TC82 1133 aaKnown RBP9.85□□□□□ -0.83
PRPF4B-208ENST00000490653 INTS5Q6P9B9 1019 aaKnown RBP9.85□□□□□ -0.83
PRPF4B-208ENST00000490653 NYAP1Q6ZVC0 841 aa9.85□□□□□ -0.83
PRPF4B-208ENST00000490653 ZFRQ96KR1 1074 aaKnown RBP9.85□□□□□ -0.83
PRPF4B-208ENST00000490653 NMRK2Q9NPI5 230 aa9.85□□□□□ -0.83
PRPF4B-208ENST00000490653 RTCBQ9Y3I0 505 aaKnown RBP9.85□□□□□ -0.83
PRPF4B-208ENST00000490653 SCN11AQ9UI33 1791 aa9.84□□□□□ -0.83
PRPF4B-208ENST00000490653 A0A0G2JLW4 131 aa9.84□□□□□ -0.83
PRPF4B-208ENST00000490653 KCNQ3O43525 872 aa9.84□□□□□ -0.83
PRPF4B-208ENST00000490653 MMP10P09238 476 aa9.84□□□□□ -0.83
PRPF4B-208ENST00000490653 CRKLP46109 303 aaKnown RBP9.84□□□□□ -0.83
PRPF4B-208ENST00000490653 C6orf132Q5T0Z8 1188 aa9.84□□□□□ -0.83
PRPF4B-208ENST00000490653 C10orf71Q711Q0 1435 aa9.83□□□□□ -0.84
PRPF4B-208ENST00000490653 GYS1P13807 737 aa9.83□□□□□ -0.84
PRPF4B-208ENST00000490653 PRKAR2BP31323 418 aa9.83□□□□□ -0.84
PRPF4B-208ENST00000490653 RSPH6AQ9H0K4 717 aa9.83□□□□□ -0.84
PRPF4B-208ENST00000490653 PLEKHG2Q9H7P9 1386 aa9.83□□□□□ -0.84
PRPF4B-208ENST00000490653 CNTNAP4Q9C0A0 1308 aa9.82□□□□□ -0.84
PRPF4B-208ENST00000490653 VIRMAQ69YN4 1812 aaKnown RBP9.82□□□□□ -0.84
PRPF4B-208ENST00000490653 DPYSL4O14531 572 aa9.82□□□□□ -0.84
PRPF4B-208ENST00000490653 CYP19A1P11511 503 aaPredicted RBP9.82□□□□□ -0.84
PRPF4B-208ENST00000490653 DCTN1Q14203 1278 aa9.82□□□□□ -0.84
PRPF4B-208ENST00000490653 PCNTO95613 3336 aa9.82□□□□□ -0.84
PRPF4B-208ENST00000490653 GNAT3A8MTJ3 354 aa9.81□□□□□ -0.84
PRPF4B-208ENST00000490653 TRIM6-TRIM34B2RNG4 842 aa9.81□□□□□ -0.84
PRPF4B-208ENST00000490653 U2AF1L5P0DN76 240 aaPredicted RBP9.81□□□□□ -0.84
PRPF4B-208ENST00000490653 DPEP1P16444 411 aa9.81□□□□□ -0.84
PRPF4B-208ENST00000490653 RFC4P35249 363 aa9.81□□□□□ -0.84
PRPF4B-208ENST00000490653 PRELPP51888 382 aa9.81□□□□□ -0.84
PRPF4B-208ENST00000490653 U2AF1Q01081 240 aaKnown RBP eCLIP9.81□□□□□ -0.84
PRPF4B-208ENST00000490653 SEPT9Q9UHD8 586 aaPredicted RBP9.81□□□□□ -0.84
PRPF4B-208ENST00000490653 KIF13BQ9NQT8 1826 aa9.81□□□□□ -0.84
PRPF4B-208ENST00000490653 COL5A3P25940 1745 aaPredicted RBP9.81□□□□□ -0.84
PRPF4B-208ENST00000490653 TJP1Q07157 1748 aa9.8□□□□□ -0.84
PRPF4B-208ENST00000490653 HMGB2P26583 209 aaKnown RBP9.8□□□□□ -0.84
PRPF4B-208ENST00000490653 DDX10Q13206 875 aaKnown RBP9.8□□□□□ -0.84
PRPF4B-208ENST00000490653 COL13A1Q5TAT6 717 aaPredicted RBP9.8□□□□□ -0.84
PRPF4B-208ENST00000490653 ZNF496Q96IT1 587 aaPredicted RBP9.8□□□□□ -0.84
PRPF4B-208ENST00000490653 CFAP53Q96M91 514 aa9.8□□□□□ -0.84
PRPF4B-208ENST00000490653 WBP1LQ9NX94 342 aa9.8□□□□□ -0.84
PRPF4B-208ENST00000490653 ZBTB1Q9Y2K1 713 aa9.8□□□□□ -0.84
PRPF4B-208ENST00000490653 N4BP2Q86UW6 1770 aaPredicted RBP9.79□□□□□ -0.84
PRPF4B-208ENST00000490653 KCPQ6ZWJ8 1503 aa9.79□□□□□ -0.84
PRPF4B-208ENST00000490653 PRAMEF22A3QJZ6 481 aa9.79□□□□□ -0.84
PRPF4B-208ENST00000490653 TOMM70O94826 608 aa9.79□□□□□ -0.84
PRPF4B-208ENST00000490653 CANXP27824 592 aaKnown RBP9.79□□□□□ -0.84
PRPF4B-208ENST00000490653 DDR1Q08345 913 aa9.79□□□□□ -0.84
PRPF4B-208ENST00000490653 USPL1Q5W0Q7 1092 aa9.79□□□□□ -0.84
PRPF4B-208ENST00000490653 MCM10Q7L590 875 aa9.79□□□□□ -0.84
PRPF4B-208ENST00000490653 NLGN1Q8N2Q7 840 aa9.79□□□□□ -0.84
PRPF4B-208ENST00000490653 GAS2L2Q8NHY3 880 aa9.79□□□□□ -0.84
PRPF4B-208ENST00000490653 CCDC87Q9NVE4 849 aa9.79□□□□□ -0.84
PRPF4B-208ENST00000490653 BCS1LQ9Y276 419 aa9.79□□□□□ -0.84
PRPF4B-208ENST00000490653 ZNF831Q5JPB2 1677 aa9.78□□□□□ -0.84
PRPF4B-208ENST00000490653 ADAMTS7Q9UKP4 1686 aa9.78□□□□□ -0.84
PRPF4B-208ENST00000490653 A1BGP04217 495 aa9.78□□□□□ -0.84
PRPF4B-208ENST00000490653 TM4SF1P30408 202 aa9.78□□□□□ -0.84
PRPF4B-208ENST00000490653 APLP1P51693 650 aa9.78□□□□□ -0.84
PRPF4B-208ENST00000490653 TEFQ10587 303 aa9.78□□□□□ -0.84
PRPF4B-208ENST00000490653 JMYQ8N9B5 988 aa9.78□□□□□ -0.84
PRPF4B-208ENST00000490653 MIS18AQ9NYP9 233 aa9.78□□□□□ -0.84
PRPF4B-208ENST00000490653 NUDCQ9Y266 331 aa9.78□□□□□ -0.84
PRPF4B-208ENST00000490653 SOS1Q07889 1333 aaPredicted RBP9.78□□□□□ -0.84
PRPF4B-208ENST00000490653 USP42Q9H9J4 1324 aaKnown RBP9.78□□□□□ -0.84
PRPF4B-208ENST00000490653 FCHSD2O94868 740 aa9.77□□□□□ -0.85
PRPF4B-208ENST00000490653 PIP4K2AP48426 406 aaPredicted RBP9.77□□□□□ -0.85
PRPF4B-208ENST00000490653 TGFB2P61812 414 aa9.77□□□□□ -0.85
PRPF4B-208ENST00000490653 KCNC4Q03721 635 aa9.77□□□□□ -0.85
PRPF4B-208ENST00000490653 C9orf131Q5VYM1 1079 aa9.77□□□□□ -0.85
PRPF4B-208ENST00000490653 ZNF790Q6PG37 636 aa9.77□□□□□ -0.85
PRPF4B-208ENST00000490653 USP16Q9Y5T5 823 aa9.77□□□□□ -0.85
PRPF4B-208ENST00000490653 MRC1P22897 1456 aa9.77□□□□□ -0.85
PRPF4B-208ENST00000490653 BRCA1P38398 1863 aaKnown RBP9.76□□□□□ -0.85
PRPF4B-208ENST00000490653 C4AP0C0L4 1744 aa9.76□□□□□ -0.85
PRPF4B-208ENST00000490653 BTBD11A6QL63 1104 aa9.76□□□□□ -0.85
PRPF4B-208ENST00000490653 ARHGAP27Q6ZUM4 889 aa9.76□□□□□ -0.85
PRPF4B-208ENST00000490653 PLEKHF1Q96S99 279 aa9.76□□□□□ -0.85
PRPF4B-208ENST00000490653 PARP3Q9Y6F1 533 aa9.76□□□□□ -0.85
PRPF4B-208ENST00000490653 CEMIPQ8WUJ3 1361 aa9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 HEG1Q9ULI3 1381 aa9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 POLRMTO00411 1230 aaKnown RBP9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 CHRNA5P30532 468 aa9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 EIF5P55010 431 aaKnown RBP9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 NFIXQ14938 502 aa9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 TTC5Q8N0Z6 440 aa9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 VSIG10Q8N0Z9 540 aa9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 CCDC24Q8N4L8 307 aa9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 DDX12PQ92771 950 aa9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 THUMPD2Q9BTF0 503 aaKnown RBP9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 NARFQ9UHQ1 456 aa9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 TSR3Q9UJK0 312 aaKnown RBP9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 TBC1D2BQ9UPU7 963 aa9.75□□□□□ -0.85
PRPF4B-208ENST00000490653 SIPA1L3O60292 1781 aaPredicted RBP9.74□□□□□ -0.85
PRPF4B-208ENST00000490653 ZPR1O75312 459 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms