RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 UTP14AQ9BVJ6 771 aaKnown RBP25.57■■□□□ 1.68
SMC4-222ENST00000490207 LTBP3Q9NS15 1303 aa25.57■■□□□ 1.68
SMC4-222ENST00000490207 KIF3CO14782 793 aa25.56■■□□□ 1.68
SMC4-222ENST00000490207 C8orf58Q8NAV2 365 aa25.56■■□□□ 1.68
SMC4-222ENST00000490207 PLBD2Q8NHP8 589 aa25.56■■□□□ 1.68
SMC4-222ENST00000490207 TSR2Q969E8 191 aaKnown RBP25.56■■□□□ 1.68
SMC4-222ENST00000490207 TAOK3Q9H2K8 898 aa25.56■■□□□ 1.68
SMC4-222ENST00000490207 RNF123Q5XPI4 1314 aa25.56■■□□□ 1.68
SMC4-222ENST00000490207 ALDH1B1P30837 517 aa25.55■■□□□ 1.68
SMC4-222ENST00000490207 TCIRG1Q13488 830 aa25.55■■□□□ 1.68
SMC4-222ENST00000490207 CCDC93Q567U6 631 aa25.55■■□□□ 1.68
SMC4-222ENST00000490207 NLRP10Q86W26 655 aa25.55■■□□□ 1.68
SMC4-222ENST00000490207 RPGRQ92834 1020 aaKnown RBP25.55■■□□□ 1.68
SMC4-222ENST00000490207 ANKRD13DQ6ZTN6 518 aa25.54■■□□□ 1.68
SMC4-222ENST00000490207 NMRK2Q9NPI5 230 aa25.54■■□□□ 1.68
SMC4-222ENST00000490207 IL16Q14005 1332 aa25.54■■□□□ 1.68
SMC4-222ENST00000490207 KDM2BQ8NHM5 1336 aa25.54■■□□□ 1.68
SMC4-222ENST00000490207 FAM9BQ8IZU0 186 aa25.53■■□□□ 1.68
SMC4-222ENST00000490207 C7orf43Q8WVR3 580 aa25.53■■□□□ 1.68
SMC4-222ENST00000490207 DDX60Q8IY21 1712 aaKnown RBP25.53■■□□□ 1.68
SMC4-222ENST00000490207 C3orf67Q6ZVT6 689 aa25.51■■□□□ 1.67
SMC4-222ENST00000490207 TSPYL6Q8N831 410 aa25.51■■□□□ 1.67
SMC4-222ENST00000490207 CHMP4AQ9BY43 222 aa25.51■■□□□ 1.67
SMC4-222ENST00000490207 SALL2Q9Y467 1007 aaPredicted RBP25.51■■□□□ 1.67
SMC4-222ENST00000490207 HOXA10P31260 410 aaPredicted RBP25.5■■□□□ 1.67
SMC4-222ENST00000490207 GOLGA2Q08379 1002 aa25.5■■□□□ 1.67
SMC4-222ENST00000490207 CCDC30Q5VVM6 783 aa25.5■■□□□ 1.67
SMC4-222ENST00000490207 NLRP3Q96P20 1036 aa25.5■■□□□ 1.67
SMC4-222ENST00000490207 PHAXQ9H814 394 aaKnown RBP25.5■■□□□ 1.67
SMC4-222ENST00000490207 TRMT112Q9UI30 125 aaKnown RBP25.5■■□□□ 1.67
SMC4-222ENST00000490207 SLC10A5Q5PT55 438 aa25.49■■□□□ 1.67
SMC4-222ENST00000490207 OLFM4Q6UX06 510 aa25.49■■□□□ 1.67
SMC4-222ENST00000490207 RBM17Q96I25 401 aaKnown RBP25.49■■□□□ 1.67
SMC4-222ENST00000490207 ISCA1Q9BUE6 129 aa25.49■■□□□ 1.67
SMC4-222ENST00000490207 SH3TC1Q8TE82 1336 aa25.48■■□□□ 1.67
SMC4-222ENST00000490207 FKBP4Q02790 459 aaKnown RBP eCLIP25.48■■□□□ 1.67
SMC4-222ENST00000490207 SNED1Q8TER0 1413 aa25.47■■□□□ 1.67
SMC4-222ENST00000490207 FANCIQ9NVI1 1328 aa25.47■■□□□ 1.67
SMC4-222ENST00000490207 RIC3Q7Z5B4 369 aa25.47■■□□□ 1.67
SMC4-222ENST00000490207 RTKN2Q8IZC4 609 aa25.47■■□□□ 1.67
SMC4-222ENST00000490207 CRAMP1Q96RY5 1269 aa25.47■■□□□ 1.67
SMC4-222ENST00000490207 WDR90Q96KV7 1748 aa25.46■■□□□ 1.67
SMC4-222ENST00000490207 GLTPD2A6NH11 291 aa25.46■■□□□ 1.67
SMC4-222ENST00000490207 ATP5J2-PTCD1G3V325 749 aa25.46■■□□□ 1.67
SMC4-222ENST00000490207 TWISTNBQ3B726 338 aaPredicted RBP25.46■■□□□ 1.67
SMC4-222ENST00000490207 WDR63Q8IWG1 891 aa25.46■■□□□ 1.67
SMC4-222ENST00000490207 ZNF428Q96B54 188 aa25.46■■□□□ 1.67
SMC4-222ENST00000490207 HCLS1P14317 486 aaPredicted RBP25.45■■□□□ 1.66
SMC4-222ENST00000490207 SYNE4Q8N205 404 aa25.45■■□□□ 1.66
SMC4-222ENST00000490207 PPEF1O14829 653 aaPredicted RBP25.44■■□□□ 1.66
SMC4-222ENST00000490207 C16orf71Q8IYS4 520 aaPredicted RBP25.44■■□□□ 1.66
SMC4-222ENST00000490207 STK31Q9BXU1 1019 aa25.44■■□□□ 1.66
SMC4-222ENST00000490207 RRAGCQ9HB90 399 aa25.44■■□□□ 1.66
SMC4-222ENST00000490207 ABCC4O15439 1325 aa25.43■■□□□ 1.66
SMC4-222ENST00000490207 TOMM70O94826 608 aa25.43■■□□□ 1.66
SMC4-222ENST00000490207 DDX58O95786 925 aaKnown RBP25.43■■□□□ 1.66
SMC4-222ENST00000490207 CC2D2BQ6DHV5 1058 aa25.43■■□□□ 1.66
SMC4-222ENST00000490207 CACNA1FO60840 1977 aa25.43■■□□□ 1.66
SMC4-222ENST00000490207 ZNF277Q9NRM2 450 aaPredicted RBP25.42■■□□□ 1.66
SMC4-222ENST00000490207 TAF1P21675 1872 aa25.42■■□□□ 1.66
SMC4-222ENST00000490207 TRIM28Q13263 835 aaKnown RBP25.41■■□□□ 1.66
SMC4-222ENST00000490207 DPY19L2Q6NUT2 758 aa25.41■■□□□ 1.66
SMC4-222ENST00000490207 FAM89AQ96GI7 184 aa25.41■■□□□ 1.66
SMC4-222ENST00000490207 MYD88Q99836 296 aa25.41■■□□□ 1.66
SMC4-222ENST00000490207 TCERG1O14776 1098 aaKnown RBP25.4■■□□□ 1.66
SMC4-222ENST00000490207 PSMD1Q99460 953 aa25.4■■□□□ 1.66
SMC4-222ENST00000490207 IARSP41252 1262 aaKnown RBP25.39■■□□□ 1.66
SMC4-222ENST00000490207 SLC51AQ86UW1 340 aa25.39■■□□□ 1.66
SMC4-222ENST00000490207 LRRC37AA6NMS7 1700 aa25.39■■□□□ 1.65
SMC4-222ENST00000490207 GRIPAP1Q4V328 841 aa25.38■■□□□ 1.65
SMC4-222ENST00000490207 DDX46Q7L014 1031 aaKnown RBP25.38■■□□□ 1.65
SMC4-222ENST00000490207 RBM46Q8TBY0 533 aaKnown RBP25.38■■□□□ 1.65
SMC4-222ENST00000490207 HSPA6P17066 643 aa25.37■■□□□ 1.65
SMC4-222ENST00000490207 RTL5Q5HYW3 569 aaPredicted RBP25.37■■□□□ 1.65
SMC4-222ENST00000490207 METTL22Q9BUU2 404 aaPredicted RBP25.37■■□□□ 1.65
SMC4-222ENST00000490207 TMX4Q9H1E5 349 aaPredicted RBP25.37■■□□□ 1.65
SMC4-222ENST00000490207 MAP3K2Q9Y2U5 619 aa25.37■■□□□ 1.65
SMC4-222ENST00000490207 VEGFAP15692 232 aaPredicted RBP25.36■■□□□ 1.65
SMC4-222ENST00000490207 EXOSC9Q06265 439 aaKnown RBP25.36■■□□□ 1.65
SMC4-222ENST00000490207 GRAPQ13588 217 aa25.36■■□□□ 1.65
SMC4-222ENST00000490207 CCDC191Q8NCU4 936 aa25.36■■□□□ 1.65
SMC4-222ENST00000490207 GRAPLQ8TC17 118 aaPredicted RBP25.36■■□□□ 1.65
SMC4-222ENST00000490207 SPINK5Q9NQ38 1064 aaPredicted RBP25.36■■□□□ 1.65
SMC4-222ENST00000490207 ATP6V0A2Q9Y487 856 aa25.36■■□□□ 1.65
SMC4-222ENST00000490207 IRS4O14654 1257 aaPredicted RBP25.35■■□□□ 1.65
SMC4-222ENST00000490207 SLC4A2P04920 1241 aa25.35■■□□□ 1.65
SMC4-222ENST00000490207 KSR2Q6VAB6 950 aa25.35■■□□□ 1.65
SMC4-222ENST00000490207 ZBTB38Q8NAP3 1195 aaPredicted RBP25.35■■□□□ 1.65
SMC4-222ENST00000490207 MYH16Q9H6N6 1097 aa25.35■■□□□ 1.65
SMC4-222ENST00000490207 CWC25Q9NXE8 425 aaPredicted RBP25.35■■□□□ 1.65
SMC4-222ENST00000490207 COL4A5P29400 1685 aa25.35■■□□□ 1.65
SMC4-222ENST00000490207 G2E3Q7L622 706 aa25.34■■□□□ 1.65
SMC4-222ENST00000490207 SCN4AP35499 1836 aa25.33■■□□□ 1.65
SMC4-222ENST00000490207 PI4KAP2A4QPH2 592 aa25.33■■□□□ 1.65
SMC4-222ENST00000490207 BBOX1O75936 387 aa25.33■■□□□ 1.65
SMC4-222ENST00000490207 DDNO94850 711 aaPredicted RBP25.33■■□□□ 1.65
SMC4-222ENST00000490207 SF3B3Q15393 1217 aaKnown RBP25.33■■□□□ 1.65
SMC4-222ENST00000490207 PI4KAP1Q8N8J0 262 aa25.33■■□□□ 1.65
SMC4-222ENST00000490207 MYH3P11055 1940 aa25.33■■□□□ 1.65
SMC4-222ENST00000490207 ZNF541Q9H0D2 1346 aa25.33■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms